RNA–Protein interactions for RNA: YDL064W

UBC9, Transcript of SUMO-conjugating enzyme involved in the Smt3p conjugation pathway, yeastyeast

Gene UBC9, Length 474 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBC9YDL064W YIL046W-AQ3E7Z4 54 aa0.41□□□□□ -2.34
UBC9YDL064W RAD50P12753 1312 aa0.4□□□□□ -2.34
UBC9YDL064W ARL3Q02804 198 aa0.4□□□□□ -2.35
UBC9YDL064W NKP2Q06162 153 aa0.4□□□□□ -2.35
UBC9YDL064W YOR097CQ12274 175 aaPredicted RBP0.4□□□□□ -2.35
UBC9YDL064W YGL041C-BQ3E750 60 aa0.4□□□□□ -2.35
UBC9YDL064W OST5Q92316 86 aa0.4□□□□□ -2.35
UBC9YDL064W MLP1Q02455 1875 aaKnown RBP0.39□□□□□ -2.35
UBC9YDL064W BPH1P25356 2167 aa0.39□□□□□ -2.35
UBC9YDL064W MRP49P32388 137 aa0.39□□□□□ -2.35
UBC9YDL064W YEA6P39953 335 aa0.39□□□□□ -2.35
UBC9YDL064W YPL261CQ08976 102 aa0.38□□□□□ -2.35
UBC9YDL064W STT4P37297 1900 aa0.38□□□□□ -2.35
UBC9YDL064W BLM10P43583 2143 aa0.37□□□□□ -2.35
UBC9YDL064W RPS29BP41058 56 aaKnown RBP0.37□□□□□ -2.35
UBC9YDL064W SLO1Q3E784 85 aa0.37□□□□□ -2.35
UBC9YDL064W YIR020CP40575 100 aa0.36□□□□□ -2.35
UBC9YDL064W PCC1Q3E833 88 aa0.36□□□□□ -2.35
UBC9YDL064W POP7P38291 140 aa0.35□□□□□ -2.35
UBC9YDL064W VPS55P47111 140 aa0.35□□□□□ -2.35
UBC9YDL064W SPC24Q04477 213 aa0.35□□□□□ -2.35
UBC9YDL064W YLR118CQ12354 227 aa0.35□□□□□ -2.35
UBC9YDL064W YLR099W-AQ3E798 87 aa0.35□□□□□ -2.35
UBC9YDL064W PAU24P38155 120 aa0.34□□□□□ -2.36
UBC9YDL064W PAU2P32612 120 aa0.33□□□□□ -2.36
UBC9YDL064W YER187WP40102 141 aa0.33□□□□□ -2.36
UBC9YDL064W RPL22BP56628 122 aaKnown RBP0.33□□□□□ -2.36
UBC9YDL064W YDR010CQ12426 110 aa0.33□□□□□ -2.36
UBC9YDL064W YLR255CO13574 117 aa0.32□□□□□ -2.36
UBC9YDL064W TDA2P40045 126 aa0.32□□□□□ -2.36
UBC9YDL064W AIM11P87275 137 aa0.32□□□□□ -2.36
UBC9YDL064W HMRA2P0CY13 119 aa0.31□□□□□ -2.36
UBC9YDL064W RPB11P38902 120 aa0.31□□□□□ -2.36
UBC9YDL064W CCW14O13547 238 aa0.3□□□□□ -2.36
UBC9YDL064W SNN1P48232 102 aa0.3□□□□□ -2.36
UBC9YDL064W FRQ1Q06389 190 aa0.3□□□□□ -2.36
UBC9YDL064W YLR363W-AQ3E747 85 aa0.3□□□□□ -2.36
UBC9YDL064W YOL164W-AQ3E7A5 60 aa0.3□□□□□ -2.36
UBC9YDL064W Q0297Q9ZZV8 51 aa0.3□□□□□ -2.36
UBC9YDL064W YCR099CP25657 155 aa0.29□□□□□ -2.36
UBC9YDL064W VMA7P39111 118 aa0.29□□□□□ -2.36
UBC9YDL064W YAR029WP39549 74 aa0.28□□□□□ -2.36
UBC9YDL064W YHR173CP38864 112 aa0.26□□□□□ -2.37
UBC9YDL064W YLR042CQ07990 161 aa0.25□□□□□ -2.37
UBC9YDL064W DAD1Q12248 94 aa0.25□□□□□ -2.37
UBC9YDL064W PAM16P42949 149 aa0.24□□□□□ -2.37
UBC9YDL064W PAU19P0CE85 124 aa0.23□□□□□ -2.37
UBC9YDL064W PAU3P25610 124 aa0.23□□□□□ -2.37
UBC9YDL064W GCV3P39726 170 aaPredicted RBP0.23□□□□□ -2.37
UBC9YDL064W YBR072C-AQ3E794 53 aa0.23□□□□□ -2.37
UBC9YDL064W YIL086CP40503 102 aa0.21□□□□□ -2.38
UBC9YDL064W RTR2Q12378 196 aa0.21□□□□□ -2.38
UBC9YDL064W YLR365WQ7LIF2 110 aa0.21□□□□□ -2.38
UBC9YDL064W RPS27AP35997 82 aaKnown RBP0.2□□□□□ -2.38
UBC9YDL064W RPS27BP38711 82 aa0.2□□□□□ -2.38
UBC9YDL064W MIX14Q04341 121 aa0.2□□□□□ -2.38
UBC9YDL064W YGR035W-AQ45U48 73 aa0.2□□□□□ -2.38
UBC9YDL064W ADK1P07170 222 aaKnown RBP0.19□□□□□ -2.38
UBC9YDL064W GTT1P40582 234 aa0.19□□□□□ -2.38
UBC9YDL064W LSM6Q06406 86 aaKnown RBP0.18□□□□□ -2.38
UBC9YDL064W YCL048W-AQ2V2Q2 79 aa0.18□□□□□ -2.38
UBC9YDL064W YFR010W-AP0C5N0 62 aa0.17□□□□□ -2.38
UBC9YDL064W WIP1Q2V2P8 89 aa0.17□□□□□ -2.38
UBC9YDL064W RPA12P32529 125 aaKnown RBP0.16□□□□□ -2.38
UBC9YDL064W YDR210WQ03482 75 aa0.16□□□□□ -2.38
UBC9YDL064W RPL39P04650 51 aa0.15□□□□□ -2.39
UBC9YDL064W SHU1P38751 150 aa0.15□□□□□ -2.39
UBC9YDL064W APS2Q00381 147 aa0.15□□□□□ -2.39
UBC9YDL064W SWC7Q06707 132 aa0.14□□□□□ -2.39
UBC9YDL064W PAU16P35994 123 aa0.13□□□□□ -2.39
UBC9YDL064W PAU15P40585 124 aa0.13□□□□□ -2.39
UBC9YDL064W IMP2P46972 177 aa0.13□□□□□ -2.39
UBC9YDL064W YHR214C-DP0CX93 97 aa0.12□□□□□ -2.39
UBC9YDL064W YOL118CQ08259 102 aa0.12□□□□□ -2.39
UBC9YDL064W BUD23P25627 275 aaPredicted RBP0.11□□□□□ -2.39
UBC9YDL064W RPS29AP41057 56 aaKnown RBP0.11□□□□□ -2.39
UBC9YDL064W HUR1P45820 110 aa0.11□□□□□ -2.39
UBC9YDL064W SIP18P50263 79 aa0.11□□□□□ -2.39
UBC9YDL064W YOR032W-AQ8TGS1 66 aa0.11□□□□□ -2.39
UBC9YDL064W YER137CP40083 148 aaKnown RBP0.1□□□□□ -2.39
UBC9YDL064W YNL190WP53872 204 aa0.1□□□□□ -2.39
UBC9YDL064W YIR021W-AQ3E739 70 aa0.1□□□□□ -2.39
UBC9YDL064W RRT15Q3E811 62 aa0.09□□□□□ -2.4
UBC9YDL064W YMR105W-AQ8TGS8 64 aa0.09□□□□□ -2.4
UBC9YDL064W YER039C-AP0CD97 72 aa0.08□□□□□ -2.4
UBC9YDL064W ROX3P25046 220 aa0.08□□□□□ -2.4
UBC9YDL064W YHR138CP38841 114 aaPredicted RBP0.08□□□□□ -2.4
UBC9YDL064W MPC2P38857 129 aa0.08□□□□□ -2.4
UBC9YDL064W YGR025WP53216 100 aa0.08□□□□□ -2.4
UBC9YDL064W HOR7Q05827 59 aa0.08□□□□□ -2.4
UBC9YDL064W COX19Q3E731 98 aa0.08□□□□□ -2.4
UBC9YDL064W COX12Q01519 83 aa0.07□□□□□ -2.4
UBC9YDL064W NCE101Q02820 53 aa0.07□□□□□ -2.4
UBC9YDL064W YPL038W-AQ3E7B4 63 aa0.07□□□□□ -2.4
UBC9YDL064W YDR034C-AP0C289 58 aa0.06□□□□□ -2.4
UBC9YDL064W SNU13P39990 126 aaKnown RBP0.06□□□□□ -2.4
UBC9YDL064W TOM7P53507 60 aa0.06□□□□□ -2.4
UBC9YDL064W RPS11AP0CX47 156 aaKnown RBP0.05□□□□□ -2.4
UBC9YDL064W RPS11BP0CX48 156 aaKnown RBP0.05□□□□□ -2.4
UBC9YDL064W YCR101CP25607 182 aa0.05□□□□□ -2.4
Retrieved 100 of 5,963 RNA–protein pairs in 17 ms