RNA–Protein interactions for RNA: YML112W

CTK3, Transcript of Gamma subunit of C-terminal domain kinase I, yeastyeast

Gene CTK3, Length 891 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTK3YML112W RPS25BP0C0T4 108 aaKnown RBP0.77□□□□□ -2.29
CTK3YML112W RPS22AP0C0W1 130 aaKnown RBP0.77□□□□□ -2.29
CTK3YML112W MRPL38P35996 138 aaPredicted RBP0.77□□□□□ -2.29
CTK3YML112W LSM2P38203 95 aaKnown RBP0.77□□□□□ -2.29
CTK3YML112W AIM4P38305 123 aaPredicted RBP0.77□□□□□ -2.29
CTK3YML112W YHL005CP38752 130 aa0.77□□□□□ -2.29
CTK3YML112W YHR138CP38841 114 aaPredicted RBP0.77□□□□□ -2.29
CTK3YML112W HSP10P38910 106 aa0.77□□□□□ -2.29
CTK3YML112W LST8P41318 303 aa0.77□□□□□ -2.29
CTK3YML112W IMP2P46972 177 aa0.77□□□□□ -2.29
CTK3YML112W ICS3P47034 131 aa0.77□□□□□ -2.29
CTK3YML112W YGL149WP53116 101 aa0.77□□□□□ -2.29
CTK3YML112W NAT5Q08689 176 aa0.77□□□□□ -2.29
CTK3YML112W DAD1Q12248 94 aa0.77□□□□□ -2.29
CTK3YML112W PCC1Q3E833 88 aa0.77□□□□□ -2.29
CTK3YML112W ENV10Q99382 181 aa0.77□□□□□ -2.29
CTK3YML112W HAP1P0CE41 1502 aa0.77□□□□□ -2.29
CTK3YML112W DOP1Q03921 1698 aa0.77□□□□□ -2.29
CTK3YML112W TY1B-JR2P47100 1755 aaKnown RBP0.77□□□□□ -2.29
CTK3YML112W TY1B-ER2Q03619 1755 aa0.77□□□□□ -2.29
CTK3YML112W TY1B-MR1Q04214 1755 aa0.77□□□□□ -2.29
CTK3YML112W TY1B-MR2Q04670 1755 aaKnown RBP0.77□□□□□ -2.29
CTK3YML112W TY1B-LR1Q12088 1755 aaKnown RBP0.77□□□□□ -2.29
CTK3YML112W TY1B-NL1Q12112 1755 aa0.77□□□□□ -2.29
CTK3YML112W TY1B-GR1Q12141 1755 aa0.77□□□□□ -2.29
CTK3YML112W TY1B-BLQ12490 1755 aa0.77□□□□□ -2.29
CTK3YML112W YER188C-AP0C0V2 99 aa0.76□□□□□ -2.29
CTK3YML112W ROX3P25046 220 aa0.76□□□□□ -2.29
CTK3YML112W SRX1P36077 127 aa0.76□□□□□ -2.29
CTK3YML112W ATG8P38182 117 aaRIP-Chip data0.76□□□□□ -2.29not detected
CTK3YML112W YHL037CP38733 133 aa0.76□□□□□ -2.29
CTK3YML112W GCV3P39726 170 aaPredicted RBP0.76□□□□□ -2.29
CTK3YML112W YEL008WP40001 126 aa0.76□□□□□ -2.29
CTK3YML112W RSM18P40033 138 aa0.76□□□□□ -2.29
CTK3YML112W POR2P40478 281 aa0.76□□□□□ -2.29
CTK3YML112W SNN1P48232 102 aa0.76□□□□□ -2.29
CTK3YML112W DAD4P69851 72 aa0.76□□□□□ -2.29
CTK3YML112W MET31Q03081 177 aa0.76□□□□□ -2.29
CTK3YML112W YDR210WQ03482 75 aa0.76□□□□□ -2.29
CTK3YML112W YPR145C-AQ2V2P0 78 aa0.76□□□□□ -2.29
CTK3YML112W YLR363W-AQ3E747 85 aa0.76□□□□□ -2.29
CTK3YML112W RPS25AQ3E792 108 aaPredicted RBP0.76□□□□□ -2.29
CTK3YML112W MYO1P08964 1928 aa0.76□□□□□ -2.29
CTK3YML112W GSC2P40989 1895 aa0.75□□□□□ -2.29
CTK3YML112W MON2P48563 1636 aaPredicted RBP0.75□□□□□ -2.29
CTK3YML112W YGL014C-AP0C5N1 53 aa0.75□□□□□ -2.29
CTK3YML112W VMA21P41806 77 aa0.75□□□□□ -2.29
CTK3YML112W MRPS12P53732 153 aa0.75□□□□□ -2.29
CTK3YML112W RPS22BQ3E7Y3 130 aaKnown RBP0.75□□□□□ -2.29
CTK3YML112W TAR1Q8TGM6 124 aa0.75□□□□□ -2.29
CTK3YML112W FAS2P19097 1887 aaKnown RBP0.75□□□□□ -2.29
CTK3YML112W RPO21P04050 1733 aaKnown RBP0.75□□□□□ -2.29
CTK3YML112W DNF1P32660 1571 aa0.74□□□□□ -2.29
CTK3YML112W YLR255CO13574 117 aa0.74□□□□□ -2.29
CTK3YML112W RPL36BO14455 100 aaKnown RBP0.74□□□□□ -2.29
CTK3YML112W PAI3P01094 68 aa0.74□□□□□ -2.29
CTK3YML112W RPL36AP05745 100 aaPredicted RBP0.74□□□□□ -2.29
CTK3YML112W RPL22AP05749 121 aaKnown RBP0.74□□□□□ -2.29
CTK3YML112W HMRA2P0CY13 119 aa0.74□□□□□ -2.29
CTK3YML112W YCL042WP25572 119 aa0.74□□□□□ -2.29
CTK3YML112W NHP2P32495 156 aaPredicted RBP0.74□□□□□ -2.29
CTK3YML112W TOM6P33448 61 aa0.74□□□□□ -2.29
CTK3YML112W YNL198CP40166 100 aa0.74□□□□□ -2.29
CTK3YML112W SED1Q01589 338 aa0.74□□□□□ -2.29
CTK3YML112W GRX5Q02784 150 aa0.74□□□□□ -2.29
CTK3YML112W YOL131WQ08270 108 aa0.74□□□□□ -2.29
CTK3YML112W YMR030W-AQ3E760 96 aa0.74□□□□□ -2.29
CTK3YML112W YLR285C-AQ3E771 56 aa0.74□□□□□ -2.29
CTK3YML112W SUS1Q6WNK7 96 aa0.74□□□□□ -2.29
CTK3YML112W TY2B-LR1P0C2J3 1770 aa0.74□□□□□ -2.29
CTK3YML112W TY2B-FP0CX63 1770 aa0.74□□□□□ -2.29
CTK3YML112W TY2B-GR2P0CX64 1770 aa0.74□□□□□ -2.29
CTK3YML112W TY2B-CP25384 1770 aa0.74□□□□□ -2.29
CTK3YML112W TY2B-DR2Q03494 1770 aa0.74□□□□□ -2.29
CTK3YML112W TY2B-DR3Q07791 1770 aaKnown RBP0.74□□□□□ -2.29
CTK3YML112W TY2B-OR1Q12113 1770 aa0.74□□□□□ -2.29
CTK3YML112W TY2B-DR1Q12472 1770 aa0.74□□□□□ -2.29
CTK3YML112W TY2B-BQ12491 1770 aa0.74□□□□□ -2.29
CTK3YML112W TY2B-OR2Q12501 1770 aa0.74□□□□□ -2.29
CTK3YML112W SRB8P25648 1427 aa0.73□□□□□ -2.29
CTK3YML112W FAS1P07149 2051 aaKnown RBP0.73□□□□□ -2.29
CTK3YML112W CCW14O13547 238 aa0.73□□□□□ -2.29
CTK3YML112W YHR214C-DP0CX93 97 aa0.73□□□□□ -2.29
CTK3YML112W MIC27P50945 234 aa0.73□□□□□ -2.29
CTK3YML112W YMR122CQ03879 124 aa0.73□□□□□ -2.29
CTK3YML112W YOL118CQ08259 102 aa0.73□□□□□ -2.29
CTK3YML112W VAM10Q08474 114 aa0.73□□□□□ -2.29
CTK3YML112W YDR381C-AQ3E6R5 114 aa0.73□□□□□ -2.29
CTK3YML112W YGR121W-AQ3E816 71 aa0.73□□□□□ -2.29
CTK3YML112W SLH1P53327 1967 aaKnown RBP0.73□□□□□ -2.29
CTK3YML112W UFD4P33202 1483 aa0.73□□□□□ -2.29
CTK3YML112W ECM29P38737 1868 aa0.72□□□□□ -2.29
CTK3YML112W PAU6P0CE90 120 aa0.72□□□□□ -2.29
CTK3YML112W PAU18P0CE91 120 aa0.72□□□□□ -2.29
CTK3YML112W TIM12P32830 109 aa0.72□□□□□ -2.29
CTK3YML112W SSS1P35179 80 aa0.72□□□□□ -2.29
CTK3YML112W PDX3P38075 228 aaKnown RBP0.72□□□□□ -2.29
CTK3YML112W YBR292CP38357 123 aa0.72□□□□□ -2.29
CTK3YML112W SWM2P40342 146 aa0.72□□□□□ -2.29
CTK3YML112W YIL163CP40448 117 aa0.72□□□□□ -2.29
Retrieved 100 of 5,963 RNA–protein pairs in 209.4 ms