RNA–Protein interactions for RNA: YLR408C

BLS1, Transcript of Subunit of the BLOC-1 complex involved in endosomal maturation, yeastyeast

Gene BLS1, Length 369 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BLS1YLR408C MPC2P38857 129 aa0.13□□□□□ -2.39
BLS1YLR408C YHR138CP38841 114 aaPredicted RBP0.12□□□□□ -2.39
BLS1YLR408C YPL038W-AQ3E7B4 63 aa0.12□□□□□ -2.39
BLS1YLR408C YGR164WP53291 111 aa0.11□□□□□ -2.39
BLS1YLR408C COX19Q3E731 98 aa0.11□□□□□ -2.39
BLS1YLR408C BUD23P25627 275 aaPredicted RBP0.09□□□□□ -2.4
BLS1YLR408C POL2P21951 2222 aaKnown RBP0.08□□□□□ -2.4
BLS1YLR408C HUR1P45820 110 aa0.08□□□□□ -2.4
BLS1YLR408C YCR101CP25607 182 aa0.07□□□□□ -2.4
BLS1YLR408C YDR210WQ03482 75 aa0.07□□□□□ -2.4
BLS1YLR408C RPS11AP0CX47 156 aaKnown RBP0.06□□□□□ -2.4
BLS1YLR408C RPS11BP0CX48 156 aaKnown RBP0.06□□□□□ -2.4
BLS1YLR408C SRB6P32570 121 aa0.06□□□□□ -2.4
BLS1YLR408C VMA21P41806 77 aa0.06□□□□□ -2.4
BLS1YLR408C YIR021W-AQ3E739 70 aa0.02□□□□□ -2.41
BLS1YLR408C RPO41P13433 1351 aaKnown RBP0.02□□□□□ -2.41
BLS1YLR408C COX12Q01519 83 aa0.01□□□□□ -2.41
BLS1YLR408C YLR419WQ06698 1435 aaKnown RBP0□□□□□ -2.41
BLS1YLR408C SWC7Q06707 132 aa-0.01□□□□□ -2.41
BLS1YLR408C ATX1P38636 73 aa-0.03□□□□□ -2.41
BLS1YLR408C MRX7P53869 86 aa-0.03□□□□□ -2.41
BLS1YLR408C YNL198CP40166 100 aa-0.04□□□□□ -2.42
BLS1YLR408C YCR095W-AQ3E787 52 aa-0.05□□□□□ -2.42
BLS1YLR408C YOR304C-AO14468 76 aa-0.06□□□□□ -2.42
BLS1YLR408C YER039C-AP0CD97 72 aa-0.06□□□□□ -2.42
BLS1YLR408C MRPL38P35996 138 aaPredicted RBP-0.06□□□□□ -2.42
BLS1YLR408C RPC10P40422 70 aa-0.06□□□□□ -2.42
BLS1YLR408C SNA2P56508 79 aa-0.07□□□□□ -2.42
BLS1YLR408C ICY1Q04329 127 aa-0.07□□□□□ -2.42
BLS1YLR408C MIC10Q96VH5 97 aa-0.07□□□□□ -2.42
BLS1YLR408C PAU6P0CE90 120 aa-0.1□□□□□ -2.43
BLS1YLR408C PAU18P0CE91 120 aa-0.1□□□□□ -2.43
BLS1YLR408C PAU20Q08322 120 aa-0.11□□□□□ -2.43
BLS1YLR408C YOS1Q3E834 85 aa-0.11□□□□□ -2.43
BLS1YLR408C SRB8P25648 1427 aa-0.12□□□□□ -2.43
BLS1YLR408C SPP41P38904 1435 aa-0.12□□□□□ -2.43
BLS1YLR408C LYS2P07702 1392 aa-0.13□□□□□ -2.43
BLS1YLR408C YFR009W-AP0C5M9 85 aa-0.13□□□□□ -2.43
BLS1YLR408C PAU5P43575 122 aa-0.13□□□□□ -2.43
BLS1YLR408C SSN2P38931 1420 aa-0.13□□□□□ -2.43
BLS1YLR408C MRP17P28778 131 aa-0.14□□□□□ -2.43
BLS1YLR408C YNR034W-AQ3E841 98 aa-0.14□□□□□ -2.43
BLS1YLR408C RIM15P43565 1770 aa-0.14□□□□□ -2.43
BLS1YLR408C YBR292CP38357 123 aa-0.15□□□□□ -2.43
BLS1YLR408C RSM18P40033 138 aa-0.15□□□□□ -2.43
BLS1YLR408C KRE5P22023 1365 aa-0.16□□□□□ -2.43
BLS1YLR408C GNA1P43577 159 aaPredicted RBP-0.16□□□□□ -2.44
BLS1YLR408C SGF11Q03067 99 aa-0.17□□□□□ -2.44
BLS1YLR408C YMR103CQ04436 120 aa-0.17□□□□□ -2.44
BLS1YLR408C LHP1P33399 275 aaKnown RBP-0.18□□□□□ -2.44
BLS1YLR408C YBR016WP38216 128 aa-0.18□□□□□ -2.44
BLS1YLR408C YBR056W-AI2HB52 66 aa-0.19□□□□□ -2.44
BLS1YLR408C YJR107C-AP0CT86 78 aa-0.2□□□□□ -2.44
BLS1YLR408C UBC4P15731 148 aa-0.21□□□□□ -2.44
BLS1YLR408C YBL071CP38185 102 aa-0.21□□□□□ -2.44
BLS1YLR408C PAU1P0CE88 120 aa-0.23□□□□□ -2.45
BLS1YLR408C PAU14P0CE89 120 aa-0.23□□□□□ -2.45
BLS1YLR408C PAU8P0CE92 120 aa-0.23□□□□□ -2.45
BLS1YLR408C PAU11P0CE93 120 aa-0.23□□□□□ -2.45
BLS1YLR408C ROX3P25046 220 aa-0.23□□□□□ -2.45
BLS1YLR408C PAU13P38725 120 aa-0.23□□□□□ -2.45
BLS1YLR408C PAU10Q03050 120 aa-0.23□□□□□ -2.45
BLS1YLR408C PAU9Q3E770 120 aa-0.23□□□□□ -2.45
BLS1YLR408C YIL134C-AQ45U18 67 aa-0.23□□□□□ -2.45
BLS1YLR408C YMR090WQ04304 227 aaKnown RBP-0.24□□□□□ -2.45
BLS1YLR408C AIM19P40502 157 aa-0.27□□□□□ -2.45
BLS1YLR408C YRF1-2P40105 1681 aa-0.27□□□□□ -2.45
BLS1YLR408C CAT8P39113 1433 aa-0.28□□□□□ -2.45
BLS1YLR408C RSM19P53733 91 aaPredicted RBP-0.28□□□□□ -2.45
BLS1YLR408C TY1B-BLQ12490 1755 aa-0.28□□□□□ -2.45
BLS1YLR408C UBC5P15732 148 aa-0.29□□□□□ -2.46
BLS1YLR408C RPL38P49167 78 aaKnown RBP-0.29□□□□□ -2.46
BLS1YLR408C PAU4P53427 120 aa-0.31□□□□□ -2.46
BLS1YLR408C RPS12P48589 143 aaKnown RBP-0.33□□□□□ -2.46
BLS1YLR408C SPC1P46965 94 aa-0.34□□□□□ -2.46
BLS1YLR408C NHP10Q03435 203 aa-0.34□□□□□ -2.46
BLS1YLR408C MIX14Q04341 121 aa-0.34□□□□□ -2.46
BLS1YLR408C YER137CP40083 148 aaKnown RBP-0.37□□□□□ -2.47
BLS1YLR408C YOR289WQ12012 251 aaPredicted RBP-0.37□□□□□ -2.47
BLS1YLR408C YBR090CP38253 122 aa-0.38□□□□□ -2.47
BLS1YLR408C YRF1-1P0CX20 1796 aa-0.38□□□□□ -2.47
BLS1YLR408C YRF1-5P0CX21 1796 aa-0.38□□□□□ -2.47
BLS1YLR408C YRF1-8P0CX22 1796 aa-0.38□□□□□ -2.47
BLS1YLR408C NTE1Q04958 1679 aa-0.39□□□□□ -2.47
BLS1YLR408C BPT1P14772 1559 aa-0.39□□□□□ -2.47
BLS1YLR408C TY3B-IQ7LHG5 1498 aaKnown RBP-0.39□□□□□ -2.47
BLS1YLR408C Q0032Q9ZZX7 96 aa-0.39□□□□□ -2.47
BLS1YLR408C HMRA1P0CY11 126 aa-0.4□□□□□ -2.47
BLS1YLR408C PDX3P38075 228 aaKnown RBP-0.4□□□□□ -2.47
BLS1YLR408C YHL005CP38752 130 aa-0.4□□□□□ -2.47
BLS1YLR408C BUD4P47136 1447 aa-0.4□□□□□ -2.47
BLS1YLR408C EMC5P40540 141 aa-0.41□□□□□ -2.48
BLS1YLR408C YNL042W-BQ3E7Z2 85 aa-0.41□□□□□ -2.48
BLS1YLR408C KSH1Q8TGJ3 72 aa-0.42□□□□□ -2.48
BLS1YLR408C TSC11P40061 1430 aa-0.42□□□□□ -2.48
BLS1YLR408C COX7P10174 60 aa-0.43□□□□□ -2.48
BLS1YLR408C RGI1P40043 161 aaPredicted RBP-0.44□□□□□ -2.48
BLS1YLR408C UTP20P35194 2493 aaKnown RBP-0.46□□□□□ -2.48
BLS1YLR408C YBR201C-AQ2V2Q3 67 aa-0.47□□□□□ -2.48
BLS1YLR408C RSF2P46974 1380 aa-0.47□□□□□ -2.49
Retrieved 100 of 5,963 RNA–protein pairs in 17.4 ms