RNA–Protein interactions for RNA: YLR268W

SEC22, Transcript of R-SNARE protein, yeastyeast

Gene SEC22, Length 645 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC22YLR268W SUS1Q6WNK7 96 aa0.4□□□□□ -2.35
SEC22YLR268W KSH1Q8TGJ3 72 aa0.4□□□□□ -2.35
SEC22YLR268W POL1P13382 1468 aa0.4□□□□□ -2.35
SEC22YLR268W VPS15P22219 1454 aa0.4□□□□□ -2.35
SEC22YLR268W SCC2Q04002 1493 aa0.4□□□□□ -2.35
SEC22YLR268W BPT1P14772 1559 aa0.4□□□□□ -2.35
SEC22YLR268W SSK2P53599 1579 aa0.4□□□□□ -2.35
SEC22YLR268W SRB8P25648 1427 aa0.39□□□□□ -2.35
SEC22YLR268W YCF1P39109 1515 aaKnown RBP0.39□□□□□ -2.35
SEC22YLR268W GCN1P33892 2672 aaKnown RBP0.39□□□□□ -2.35
SEC22YLR268W PAI3P01094 68 aa0.39□□□□□ -2.35
SEC22YLR268W YFR010W-AP0C5N0 62 aa0.39□□□□□ -2.35
SEC22YLR268W HMRA1P0CY11 126 aa0.39□□□□□ -2.35
SEC22YLR268W YCR085WP25650 117 aa0.39□□□□□ -2.35
SEC22YLR268W TOM6P33448 61 aa0.39□□□□□ -2.35
SEC22YLR268W SSS1P35179 80 aa0.39□□□□□ -2.35
SEC22YLR268W LSM2P38203 95 aaKnown RBP0.39□□□□□ -2.35
SEC22YLR268W YHL005CP38752 130 aa0.39□□□□□ -2.35
SEC22YLR268W YHR138CP38841 114 aaPredicted RBP0.39□□□□□ -2.35
SEC22YLR268W YAR029WP39549 74 aa0.39□□□□□ -2.35
SEC22YLR268W GCV3P39726 170 aaPredicted RBP0.39□□□□□ -2.35
SEC22YLR268W CYB5P40312 120 aa0.39□□□□□ -2.35
SEC22YLR268W HUR1P45820 110 aa0.39□□□□□ -2.35
SEC22YLR268W SNN1P48232 102 aa0.39□□□□□ -2.35
SEC22YLR268W GPI19Q04082 140 aa0.39□□□□□ -2.35
SEC22YLR268W HPA2Q06592 156 aa0.39□□□□□ -2.35
SEC22YLR268W PAU23Q07987 124 aa0.39□□□□□ -2.35
SEC22YLR268W YDR029WQ12111 104 aa0.39□□□□□ -2.35
SEC22YLR268W PAU17Q12370 124 aa0.39□□□□□ -2.35
SEC22YLR268W YLR365WQ7LIF2 110 aa0.39□□□□□ -2.35
SEC22YLR268W MIC10Q96VH5 97 aa0.39□□□□□ -2.35
SEC22YLR268W ENV10Q99382 181 aa0.39□□□□□ -2.35
SEC22YLR268W MYO4P32492 1471 aa0.39□□□□□ -2.35
SEC22YLR268W NUP159P40477 1460 aa0.39□□□□□ -2.35
SEC22YLR268W MMS22Q06164 1454 aa0.39□□□□□ -2.35
SEC22YLR268W YPK9Q12697 1472 aa0.39□□□□□ -2.35
SEC22YLR268W TY1B-HO13535 1793 aa0.39□□□□□ -2.35
SEC22YLR268W SWR1Q05471 1514 aa0.38□□□□□ -2.35
SEC22YLR268W ESP1Q03018 1630 aa0.38□□□□□ -2.35
SEC22YLR268W TY1B-DR4Q07793 1604 aa0.38□□□□□ -2.35
SEC22YLR268W PDR10P51533 1564 aa0.38□□□□□ -2.35
SEC22YLR268W SPT6P23615 1451 aaKnown RBP0.38□□□□□ -2.35
SEC22YLR268W TY3B-IQ7LHG5 1498 aaKnown RBP0.38□□□□□ -2.35
SEC22YLR268W RPL22AP05749 121 aaKnown RBP0.38□□□□□ -2.35
SEC22YLR268W CUP1-1P0CX80 61 aa0.38□□□□□ -2.35
SEC22YLR268W CUP1-2P0CX81 61 aa0.38□□□□□ -2.35
SEC22YLR268W MRP17P28778 131 aa0.38□□□□□ -2.35
SEC22YLR268W YKL044WP36092 106 aa0.38□□□□□ -2.35
SEC22YLR268W ATX1P38636 73 aa0.38□□□□□ -2.35
SEC22YLR268W RSM18P40033 138 aa0.38□□□□□ -2.35
SEC22YLR268W TDA2P40045 126 aa0.38□□□□□ -2.35
SEC22YLR268W YER187WP40102 141 aa0.38□□□□□ -2.35
SEC22YLR268W EMC5P40540 141 aa0.38□□□□□ -2.35
SEC22YLR268W CWP2P43497 92 aa0.38□□□□□ -2.35
SEC22YLR268W YFR035CP43608 114 aa0.38□□□□□ -2.35
SEC22YLR268W ICS3P47034 131 aa0.38□□□□□ -2.35
SEC22YLR268W YJR128WP47162 119 aa0.38□□□□□ -2.35
SEC22YLR268W RPL22BP56628 122 aaKnown RBP0.38□□□□□ -2.35
SEC22YLR268W COX12Q01519 83 aa0.38□□□□□ -2.35
SEC22YLR268W YIL014C-AQ02598 104 aa0.38□□□□□ -2.35
SEC22YLR268W YDR042CQ03205 200 aa0.38□□□□□ -2.35
SEC22YLR268W YOL131WQ08270 108 aa0.38□□□□□ -2.35
SEC22YLR268W DAD1Q12248 94 aa0.38□□□□□ -2.35
SEC22YLR268W YOR343CQ12484 108 aa0.38□□□□□ -2.35
SEC22YLR268W YLR363W-AQ3E747 85 aa0.38□□□□□ -2.35
SEC22YLR268W YMR175W-AQ3E766 64 aa0.38□□□□□ -2.35
SEC22YLR268W YGR240C-AQ3E786 66 aa0.38□□□□□ -2.35
SEC22YLR268W VMA9Q3E7B6 73 aa0.38□□□□□ -2.35
SEC22YLR268W STU1P38198 1513 aa0.38□□□□□ -2.35
SEC22YLR268W ESC1Q03661 1658 aaKnown RBP0.37□□□□□ -2.35
SEC22YLR268W IQG1Q12280 1495 aa0.37□□□□□ -2.35
SEC22YLR268W YJL197C-AP0C5P0 93 aa0.37□□□□□ -2.35
SEC22YLR268W PAU19P0CE85 124 aa0.37□□□□□ -2.35
SEC22YLR268W PAU3P25610 124 aa0.37□□□□□ -2.35
SEC22YLR268W NHP2P32495 156 aaPredicted RBP0.37□□□□□ -2.35
SEC22YLR268W PAU15P40585 124 aa0.37□□□□□ -2.35
SEC22YLR268W YOL118CQ08259 102 aa0.37□□□□□ -2.35
SEC22YLR268W YOR105WQ08504 108 aa0.37□□□□□ -2.35
SEC22YLR268W YPL261CQ08976 102 aa0.37□□□□□ -2.35
SEC22YLR268W POC4Q12245 148 aaPredicted RBP0.37□□□□□ -2.35
SEC22YLR268W YOR314WQ12506 109 aa0.37□□□□□ -2.35
SEC22YLR268W YKL065W-AQ2V2P2 73 aa0.37□□□□□ -2.35
SEC22YLR268W YKL023C-AQ2V2P3 75 aa0.37□□□□□ -2.35
SEC22YLR268W YIL102C-AQ2V2P5 75 aa0.37□□□□□ -2.35
SEC22YLR268W YDR119W-AQ2V2P9 66 aa0.37□□□□□ -2.35
SEC22YLR268W YCL048W-AQ2V2Q2 79 aa0.37□□□□□ -2.35
SEC22YLR268W YDR381C-AQ3E6R5 114 aa0.37□□□□□ -2.35
SEC22YLR268W YPL038W-AQ3E7B4 63 aa0.37□□□□□ -2.35
SEC22YLR268W YFL041W-AQ3E817 63 aa0.37□□□□□ -2.35
SEC22YLR268W MHF2Q3E829 80 aa0.37□□□□□ -2.35
SEC22YLR268W PCC1Q3E833 88 aa0.37□□□□□ -2.35
SEC22YLR268W YNR034W-AQ3E841 98 aa0.37□□□□□ -2.35
SEC22YLR268W YIL134C-AQ45U18 67 aa0.37□□□□□ -2.35
SEC22YLR268W OST5Q92316 86 aa0.37□□□□□ -2.35
SEC22YLR268W BNI1P41832 1953 aa0.37□□□□□ -2.35
SEC22YLR268W SIN3P22579 1536 aa0.37□□□□□ -2.35
SEC22YLR268W SNQ2P32568 1501 aaKnown RBP0.37□□□□□ -2.35
SEC22YLR268W PDR5P33302 1511 aaKnown RBP0.37□□□□□ -2.35
SEC22YLR268W NUP170P38181 1502 aa0.37□□□□□ -2.35
SEC22YLR268W PDR12Q02785 1511 aa0.37□□□□□ -2.35
Retrieved 100 of 5,963 RNA–protein pairs in 132.5 ms