RNA–Protein interactions for RNA: YKR094C

RPL40B, Transcript of Ubiquitin-ribosomal 60S subunit protein L40B fusion protein, yeastyeast

Gene RPL40B, Length 387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPL40BYKR094C UBC5P15732 148 aa0.45□□□□□ -2.34
RPL40BYKR094C YCR101CP25607 182 aa0.45□□□□□ -2.34
RPL40BYKR094C SRB6P32570 121 aa0.45□□□□□ -2.34
RPL40BYKR094C YER137CP40083 148 aaKnown RBP0.45□□□□□ -2.34
RPL40BYKR094C IMP2P46972 177 aa0.45□□□□□ -2.34
RPL40BYKR094C MRPS12P53732 153 aa0.45□□□□□ -2.34
RPL40BYKR094C YMR103CQ04436 120 aa0.45□□□□□ -2.34
RPL40BYKR094C LSM6Q06406 86 aaKnown RBP0.45□□□□□ -2.34
RPL40BYKR094C YOL118CQ08259 102 aa0.45□□□□□ -2.34
RPL40BYKR094C YDR010CQ12426 110 aa0.45□□□□□ -2.34
RPL40BYKR094C NTE1Q04958 1679 aa0.44□□□□□ -2.34
RPL40BYKR094C GEA2P39993 1459 aaKnown RBP0.44□□□□□ -2.34
RPL40BYKR094C LHP1P33399 275 aaKnown RBP0.44□□□□□ -2.34
RPL40BYKR094C YIL086CP40503 102 aa0.44□□□□□ -2.34
RPL40BYKR094C MIX14Q04341 121 aa0.44□□□□□ -2.34
RPL40BYKR094C YBR072C-AQ3E794 53 aa0.44□□□□□ -2.34
RPL40BYKR094C BRR2P32639 2163 aaKnown RBP0.44□□□□□ -2.34
RPL40BYKR094C BNI1P41832 1953 aa0.44□□□□□ -2.34
RPL40BYKR094C PDR11P40550 1411 aa0.44□□□□□ -2.34
RPL40BYKR094C KRE5P22023 1365 aa0.44□□□□□ -2.34
RPL40BYKR094C REV3P14284 1504 aa0.43□□□□□ -2.34
RPL40BYKR094C BLM10P43583 2143 aa0.43□□□□□ -2.34
RPL40BYKR094C PAU16P35994 123 aa0.43□□□□□ -2.34
RPL40BYKR094C PAU15P40585 124 aa0.43□□□□□ -2.34
RPL40BYKR094C COX12Q01519 83 aa0.43□□□□□ -2.34
RPL40BYKR094C YDR210WQ03482 75 aa0.43□□□□□ -2.34
RPL40BYKR094C MIC10Q96VH5 97 aa0.43□□□□□ -2.34
RPL40BYKR094C POL2P21951 2222 aaKnown RBP0.42□□□□□ -2.34
RPL40BYKR094C BUD23P25627 275 aaPredicted RBP0.42□□□□□ -2.34
RPL40BYKR094C SHU1P38751 150 aa0.42□□□□□ -2.34
RPL40BYKR094C YHL005CP38752 130 aa0.42□□□□□ -2.34
RPL40BYKR094C FYV7Q12247 151 aa0.42□□□□□ -2.34
RPL40BYKR094C MYO1P08964 1928 aa0.42□□□□□ -2.34
RPL40BYKR094C TOP2P06786 1428 aaKnown RBP0.41□□□□□ -2.34
RPL40BYKR094C SRB8P25648 1427 aa0.41□□□□□ -2.34
RPL40BYKR094C CAT8P39113 1433 aa0.41□□□□□ -2.34
RPL40BYKR094C YLR255CO13574 117 aa0.41□□□□□ -2.34
RPL40BYKR094C MRP17P28778 131 aa0.41□□□□□ -2.34
RPL40BYKR094C RPS29BP41058 56 aaKnown RBP0.41□□□□□ -2.34
RPL40BYKR094C YPL038W-AQ3E7B4 63 aa0.41□□□□□ -2.34
RPL40BYKR094C FAS2P19097 1887 aaKnown RBP0.4□□□□□ -2.35
RPL40BYKR094C AUA1P32450 94 aa0.4□□□□□ -2.35
RPL40BYKR094C YBR292CP38357 123 aa0.4□□□□□ -2.35
RPL40BYKR094C MPC2P38857 129 aa0.4□□□□□ -2.35
RPL40BYKR094C YHR173CP38864 112 aa0.4□□□□□ -2.35
RPL40BYKR094C GCV3P39726 170 aaPredicted RBP0.4□□□□□ -2.35
RPL40BYKR094C KSH1Q8TGJ3 72 aa0.4□□□□□ -2.35
RPL40BYKR094C RIM15P43565 1770 aa0.4□□□□□ -2.35
RPL40BYKR094C EMC5P40540 141 aa0.39□□□□□ -2.35
RPL40BYKR094C YCR095W-AQ3E787 52 aa0.39□□□□□ -2.35
RPL40BYKR094C SSN2P38931 1420 aa0.38□□□□□ -2.35
RPL40BYKR094C ROX3P25046 220 aa0.38□□□□□ -2.35
RPL40BYKR094C AIM19P40502 157 aa0.38□□□□□ -2.35
RPL40BYKR094C RSM19P53733 91 aaPredicted RBP0.38□□□□□ -2.35
RPL40BYKR094C MRX7P53869 86 aa0.38□□□□□ -2.35
RPL40BYKR094C SNA2P56508 79 aa0.38□□□□□ -2.35
RPL40BYKR094C YRF1-1P0CX20 1796 aa0.37□□□□□ -2.35
RPL40BYKR094C YRF1-5P0CX21 1796 aa0.37□□□□□ -2.35
RPL40BYKR094C YRF1-8P0CX22 1796 aa0.37□□□□□ -2.35
RPL40BYKR094C ICY1Q04329 127 aa0.37□□□□□ -2.35
RPL40BYKR094C ZEO1Q08245 113 aa0.37□□□□□ -2.35
RPL40BYKR094C TY1B-BLQ12490 1755 aa0.37□□□□□ -2.35
RPL40BYKR094C RPA190P10964 1664 aaKnown RBP0.37□□□□□ -2.35
RPL40BYKR094C YRF1-2P40105 1681 aa0.37□□□□□ -2.35
RPL40BYKR094C RPS11AP0CX47 156 aaKnown RBP0.36□□□□□ -2.35
RPL40BYKR094C RPS11BP0CX48 156 aaKnown RBP0.36□□□□□ -2.35
RPL40BYKR094C MRPL38P35996 138 aaPredicted RBP0.36□□□□□ -2.35
RPL40BYKR094C PDX3P38075 228 aaKnown RBP0.36□□□□□ -2.35
RPL40BYKR094C PAU5P43575 122 aa0.36□□□□□ -2.35
RPL40BYKR094C YOR289WQ12012 251 aaPredicted RBP0.36□□□□□ -2.35
RPL40BYKR094C SNF2P22082 1703 aa0.35□□□□□ -2.35
RPL40BYKR094C RSF2P46974 1380 aa0.35□□□□□ -2.35
RPL40BYKR094C HMRA1P0CY11 126 aa0.35□□□□□ -2.35
RPL40BYKR094C PAU20Q08322 120 aa0.35□□□□□ -2.35
RPL40BYKR094C YPL225WQ08971 146 aaKnown RBP0.35□□□□□ -2.35
RPL40BYKR094C MSL1P40567 111 aaPredicted RBP0.34□□□□□ -2.36
RPL40BYKR094C YDR029WQ12111 104 aa0.34□□□□□ -2.36
RPL40BYKR094C YOL164W-AQ3E7A5 60 aa0.34□□□□□ -2.36
RPL40BYKR094C YNR034W-AQ3E841 98 aa0.34□□□□□ -2.36
RPL40BYKR094C TY1B-BRQ12193 1756 aa0.34□□□□□ -2.36
RPL40BYKR094C PAU1P0CE88 120 aa0.33□□□□□ -2.36
RPL40BYKR094C PAU14P0CE89 120 aa0.33□□□□□ -2.36
RPL40BYKR094C PAU6P0CE90 120 aa0.33□□□□□ -2.36
RPL40BYKR094C PAU18P0CE91 120 aa0.33□□□□□ -2.36
RPL40BYKR094C PAU8P0CE92 120 aa0.33□□□□□ -2.36
RPL40BYKR094C PAU11P0CE93 120 aa0.33□□□□□ -2.36
RPL40BYKR094C YBL071CP38185 102 aa0.33□□□□□ -2.36
RPL40BYKR094C PAU13P38725 120 aa0.33□□□□□ -2.36
RPL40BYKR094C SNU13P39990 126 aaKnown RBP0.33□□□□□ -2.36
RPL40BYKR094C RSM18P40033 138 aa0.33□□□□□ -2.36
RPL40BYKR094C PAU10Q03050 120 aa0.33□□□□□ -2.36
RPL40BYKR094C PAU9Q3E770 120 aa0.33□□□□□ -2.36
RPL40BYKR094C SUS1Q6WNK7 96 aa0.33□□□□□ -2.36
RPL40BYKR094C PDR10P51533 1564 aa0.32□□□□□ -2.36
RPL40BYKR094C DNF3Q12674 1656 aa0.32□□□□□ -2.36
RPL40BYKR094C TAO3P40468 2376 aa0.32□□□□□ -2.36
RPL40BYKR094C ATX1P38636 73 aa0.31□□□□□ -2.36
RPL40BYKR094C PAU4P53427 120 aa0.31□□□□□ -2.36
RPL40BYKR094C YNL190WP53872 204 aa0.31□□□□□ -2.36
RPL40BYKR094C YDR042CQ03205 200 aa0.31□□□□□ -2.36
Retrieved 100 of 5,963 RNA–protein pairs in 362.2 ms