RNA–Protein interactions for RNA: YGR006W

PRP18, Transcript of Splicing factor and component of snRNP U5, yeastyeast

Gene PRP18, Length 756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP18YGR006W RPL36BO14455 100 aaKnown RBP1.76□□□□□ -2.13
PRP18YGR006W RPL36AP05745 100 aaPredicted RBP1.76□□□□□ -2.13
PRP18YGR006W YBR027CP38220 110 aa1.76□□□□□ -2.13
PRP18YGR006W POC4Q12245 148 aaPredicted RBP1.76□□□□□ -2.13
PRP18YGR006W SUS1Q6WNK7 96 aa1.76□□□□□ -2.13
PRP18YGR006W RRP5Q05022 1729 aaKnown RBP1.76□□□□□ -2.13
PRP18YGR006W RPA12P32529 125 aaKnown RBP1.75□□□□□ -2.13
PRP18YGR006W PAU16P35994 123 aa1.75□□□□□ -2.13
PRP18YGR006W COX23P38824 151 aa1.75□□□□□ -2.13
PRP18YGR006W PAU15P40585 124 aa1.75□□□□□ -2.13
PRP18YGR006W CWP2P43497 92 aa1.75□□□□□ -2.13
PRP18YGR006W DNF1P32660 1571 aa1.75□□□□□ -2.13
PRP18YGR006W NTE1Q04958 1679 aa1.74□□□□□ -2.13
PRP18YGR006W YCR085WP25650 117 aa1.74□□□□□ -2.13
PRP18YGR006W RSM18P40033 138 aa1.74□□□□□ -2.13
PRP18YGR006W POR2P40478 281 aa1.74□□□□□ -2.13
PRP18YGR006W YFL065CP43539 102 aa1.74□□□□□ -2.13
PRP18YGR006W HPA2Q06592 156 aa1.74□□□□□ -2.13
PRP18YGR006W YPR203WQ08994 102 aa1.74□□□□□ -2.13
PRP18YGR006W MHF1Q3E835 90 aa1.74□□□□□ -2.13
PRP18YGR006W YHR213W-AQ8TGT4 77 aa1.74□□□□□ -2.13
PRP18YGR006W ENV10Q99382 181 aa1.74□□□□□ -2.13
PRP18YGR006W TY1B-JR2P47100 1755 aaKnown RBP1.74□□□□□ -2.13
PRP18YGR006W TY1B-ER2Q03619 1755 aa1.74□□□□□ -2.13
PRP18YGR006W TY1B-MR1Q04214 1755 aa1.74□□□□□ -2.13
PRP18YGR006W TY1B-MR2Q04670 1755 aaKnown RBP1.74□□□□□ -2.13
PRP18YGR006W TY1B-LR1Q12088 1755 aaKnown RBP1.74□□□□□ -2.13
PRP18YGR006W TY1B-NL1Q12112 1755 aa1.74□□□□□ -2.13
PRP18YGR006W TY1B-GR1Q12141 1755 aa1.74□□□□□ -2.13
PRP18YGR006W TY1B-BLQ12490 1755 aa1.74□□□□□ -2.13
PRP18YGR006W ECM29P38737 1868 aa1.73□□□□□ -2.13
PRP18YGR006W YGL014C-AP0C5N1 53 aa1.73□□□□□ -2.13
PRP18YGR006W GCV3P39726 170 aaPredicted RBP1.73□□□□□ -2.13
PRP18YGR006W SED1Q01589 338 aa1.73□□□□□ -2.13
PRP18YGR006W ICY1Q04329 127 aa1.73□□□□□ -2.13
PRP18YGR006W TAR1Q8TGM6 124 aa1.73□□□□□ -2.13
PRP18YGR006W ROX3P25046 220 aa1.72□□□□□ -2.13
PRP18YGR006W IMP2P46972 177 aa1.72□□□□□ -2.13
PRP18YGR006W YMR321CQ04898 105 aa1.72□□□□□ -2.13
PRP18YGR006W MON2P48563 1636 aaPredicted RBP1.72□□□□□ -2.13
PRP18YGR006W RPL33AP05744 107 aaKnown RBP1.71□□□□□ -2.14
PRP18YGR006W PFY1P07274 126 aa1.71□□□□□ -2.14
PRP18YGR006W YHL037CP38733 133 aa1.71□□□□□ -2.14
PRP18YGR006W LST8P41318 303 aa1.71□□□□□ -2.14
PRP18YGR006W PAU5P43575 122 aa1.71□□□□□ -2.14
PRP18YGR006W ICS3P47034 131 aa1.71□□□□□ -2.14
PRP18YGR006W VAM10Q08474 114 aa1.71□□□□□ -2.14
PRP18YGR006W FKS3Q04952 1785 aa1.71□□□□□ -2.14
PRP18YGR006W PDR12Q02785 1511 aa1.71□□□□□ -2.14
PRP18YGR006W ACC1Q00955 2233 aaKnown RBP1.7□□□□□ -2.14
PRP18YGR006W LSM2P38203 95 aaKnown RBP1.7□□□□□ -2.14
PRP18YGR006W YBR013CP38215 129 aa1.7□□□□□ -2.14
PRP18YGR006W AIM4P38305 123 aaPredicted RBP1.7□□□□□ -2.14
PRP18YGR006W PRM3Q08931 133 aa1.7□□□□□ -2.14
PRP18YGR006W SMC4Q12267 1418 aa1.7□□□□□ -2.14
PRP18YGR006W YCL048W-AQ2V2Q2 79 aa1.7□□□□□ -2.14
PRP18YGR006W RPO21P04050 1733 aaKnown RBP1.69□□□□□ -2.14
PRP18YGR006W RPS22AP0C0W1 130 aaKnown RBP1.69□□□□□ -2.14
PRP18YGR006W YCL042WP25572 119 aa1.69□□□□□ -2.14
PRP18YGR006W TOM6P33448 61 aa1.69□□□□□ -2.14
PRP18YGR006W YEL008WP40001 126 aa1.69□□□□□ -2.14
PRP18YGR006W YMR122CQ03879 124 aa1.69□□□□□ -2.14
PRP18YGR006W COA4Q05809 96 aa1.69□□□□□ -2.14
PRP18YGR006W YOL118CQ08259 102 aa1.69□□□□□ -2.14
PRP18YGR006W RPL22AP05749 121 aaKnown RBP1.68□□□□□ -2.14
PRP18YGR006W HMRA2P0CY13 119 aa1.68□□□□□ -2.14
PRP18YGR006W YDR119W-AQ2V2P9 66 aa1.68□□□□□ -2.14
PRP18YGR006W MHF2Q3E829 80 aa1.68□□□□□ -2.14
PRP18YGR006W SRB8P25648 1427 aa1.67□□□□□ -2.14
PRP18YGR006W PAI3P01094 68 aa1.67□□□□□ -2.14
PRP18YGR006W AQY2P0CD90 149 aa1.67□□□□□ -2.14
PRP18YGR006W YIL163CP40448 117 aa1.67□□□□□ -2.14
PRP18YGR006W LSM6Q06406 86 aaKnown RBP1.67□□□□□ -2.14
PRP18YGR006W YLR285C-AQ3E771 56 aa1.67□□□□□ -2.14
PRP18YGR006W SPO14P36126 1683 aa1.67□□□□□ -2.14
PRP18YGR006W PMD1P32634 1753 aa1.67□□□□□ -2.14
PRP18YGR006W VPS55P47111 140 aa1.66□□□□□ -2.14
PRP18YGR006W YDR381C-AQ3E6R5 114 aa1.66□□□□□ -2.14
PRP18YGR006W YCR095W-AQ3E787 52 aa1.66□□□□□ -2.14
PRP18YGR006W YRF1-1P0CX20 1796 aa1.65□□□□□ -2.14
PRP18YGR006W YRF1-5P0CX21 1796 aa1.65□□□□□ -2.14
PRP18YGR006W YRF1-8P0CX22 1796 aa1.65□□□□□ -2.14
PRP18YGR006W URB1P34241 1764 aaKnown RBP1.65□□□□□ -2.14
PRP18YGR006W MYO4P32492 1471 aa1.65□□□□□ -2.15
PRP18YGR006W IQG1Q12280 1495 aa1.65□□□□□ -2.15
PRP18YGR006W CCW14O13547 238 aa1.65□□□□□ -2.15
PRP18YGR006W YSF3P0C074 85 aaPredicted RBP1.65□□□□□ -2.15
PRP18YGR006W YHR214C-DP0CX93 97 aa1.65□□□□□ -2.15
PRP18YGR006W MRP17P28778 131 aa1.65□□□□□ -2.15
PRP18YGR006W MRPL38P35996 138 aaPredicted RBP1.65□□□□□ -2.15
PRP18YGR006W SWM2P40342 146 aa1.65□□□□□ -2.15
PRP18YGR006W YMR007WQ03675 126 aa1.65□□□□□ -2.15
PRP18YGR006W YOR343CQ12484 108 aa1.65□□□□□ -2.15
PRP18YGR006W COA3Q3E7B2 85 aa1.65□□□□□ -2.15
PRP18YGR006W RPS22BQ3E7Y3 130 aaKnown RBP1.65□□□□□ -2.15
PRP18YGR006W YFR010W-AP0C5N0 62 aa1.64□□□□□ -2.15
PRP18YGR006W NHP2P32495 156 aaPredicted RBP1.64□□□□□ -2.15
PRP18YGR006W MIC27P50945 234 aa1.64□□□□□ -2.15
PRP18YGR006W YDR210WQ03482 75 aa1.64□□□□□ -2.15
PRP18YGR006W CCW12Q12127 133 aa1.64□□□□□ -2.15
Retrieved 100 of 5,963 RNA–protein pairs in 25.5 ms