RNA–Protein interactions for RNA: YGR003W

CUL3, Transcript of Ubiquitin-protein ligase, yeastyeast

Gene CUL3, Length 2,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CUL3YGR003W YIL134C-AQ45U18 67 aa-0.28□□□□□ -2.45
CUL3YGR003W DYN1P36022 4092 aa-0.28□□□□□ -2.45
CUL3YGR003W TY1B-BLQ12490 1755 aa-0.28□□□□□ -2.45
CUL3YGR003W ROX3P25046 220 aa-0.28□□□□□ -2.45
CUL3YGR003W MPC2P38857 129 aa-0.28□□□□□ -2.45
CUL3YGR003W RPB11P38902 120 aa-0.28□□□□□ -2.45
CUL3YGR003W DYN2Q02647 92 aa-0.28□□□□□ -2.45
CUL3YGR003W TOR1P35169 2470 aa-0.29□□□□□ -2.46
CUL3YGR003W PAU6P0CE90 120 aa-0.29□□□□□ -2.46
CUL3YGR003W PAU18P0CE91 120 aa-0.29□□□□□ -2.46
CUL3YGR003W YNL198CP40166 100 aa-0.29□□□□□ -2.46
CUL3YGR003W YLR118CQ12354 227 aa-0.29□□□□□ -2.46
CUL3YGR003W YPL038W-AQ3E7B4 63 aa-0.29□□□□□ -2.46
CUL3YGR003W YLR365WQ7LIF2 110 aa-0.29□□□□□ -2.46
CUL3YGR003W YRF1-1P0CX20 1796 aa-0.29□□□□□ -2.46
CUL3YGR003W YRF1-5P0CX21 1796 aa-0.29□□□□□ -2.46
CUL3YGR003W YRF1-8P0CX22 1796 aa-0.29□□□□□ -2.46
CUL3YGR003W NKP2Q06162 153 aa-0.29□□□□□ -2.46
CUL3YGR003W YOL118CQ08259 102 aa-0.29□□□□□ -2.46
CUL3YGR003W CAT8P39113 1433 aa-0.3□□□□□ -2.46
CUL3YGR003W RPS29AP41057 56 aaKnown RBP-0.3□□□□□ -2.46
CUL3YGR003W YDR278CQ05612 105 aa-0.3□□□□□ -2.46
CUL3YGR003W YNR034W-AQ3E841 98 aa-0.3□□□□□ -2.46
CUL3YGR003W CUP1-1P0CX80 61 aa-0.3□□□□□ -2.46
CUL3YGR003W CUP1-2P0CX81 61 aa-0.3□□□□□ -2.46
CUL3YGR003W YCR101CP25607 182 aa-0.3□□□□□ -2.46
CUL3YGR003W POP7P38291 140 aa-0.3□□□□□ -2.46
CUL3YGR003W PAU5P43575 122 aa-0.3□□□□□ -2.46
CUL3YGR003W MRX7P53869 86 aa-0.3□□□□□ -2.46
CUL3YGR003W AIM11P87275 137 aa-0.3□□□□□ -2.46
CUL3YGR003W YCL048W-AQ2V2Q2 79 aa-0.31□□□□□ -2.46
CUL3YGR003W YRF1-2P40105 1681 aa-0.31□□□□□ -2.46
CUL3YGR003W MYO2P19524 1574 aaKnown RBP-0.31□□□□□ -2.46
CUL3YGR003W YPK9Q12697 1472 aa-0.31□□□□□ -2.46
CUL3YGR003W KRE5P22023 1365 aa-0.31□□□□□ -2.46
CUL3YGR003W MRPL38P35996 138 aaPredicted RBP-0.32□□□□□ -2.46
CUL3YGR003W YGL204CP53089 101 aa-0.32□□□□□ -2.46
CUL3YGR003W MPC1P53157 130 aaKnown RBP-0.32□□□□□ -2.46
CUL3YGR003W RSM18P40033 138 aa-0.32□□□□□ -2.46
CUL3YGR003W GTT1P40582 234 aa-0.32□□□□□ -2.46
CUL3YGR003W YGR164WP53291 111 aa-0.32□□□□□ -2.46
CUL3YGR003W YCR108CQ3E819 63 aa-0.32□□□□□ -2.46
CUL3YGR003W TY1B-LR3P0C2I6 1755 aaKnown RBP-0.33□□□□□ -2.46
CUL3YGR003W TY1B-PR3P0C2J1 1755 aaKnown RBP-0.33□□□□□ -2.46
CUL3YGR003W YCR099CP25657 155 aa-0.33□□□□□ -2.46
CUL3YGR003W YHR138CP38841 114 aaPredicted RBP-0.33□□□□□ -2.46
CUL3YGR003W PAU20Q08322 120 aa-0.33□□□□□ -2.46
CUL3YGR003W WIP1Q2V2P8 89 aa-0.33□□□□□ -2.46
CUL3YGR003W YCR095W-AQ3E787 52 aa-0.33□□□□□ -2.46
CUL3YGR003W SPC1P46965 94 aa-0.33□□□□□ -2.46
CUL3YGR003W ICY1Q04329 127 aa-0.33□□□□□ -2.46
CUL3YGR003W YBL071CP38185 102 aa-0.34□□□□□ -2.46
CUL3YGR003W MIC10Q96VH5 97 aa-0.34□□□□□ -2.46
CUL3YGR003W SSN2P38931 1420 aa-0.34□□□□□ -2.46
CUL3YGR003W PAU8P0CE92 120 aa-0.34□□□□□ -2.46
CUL3YGR003W PAU11P0CE93 120 aa-0.34□□□□□ -2.46
CUL3YGR003W MRP17P28778 131 aa-0.34□□□□□ -2.46
CUL3YGR003W LHP1P33399 275 aaKnown RBP-0.34□□□□□ -2.46
CUL3YGR003W PAU13P38725 120 aa-0.34□□□□□ -2.46
CUL3YGR003W VMA7P39111 118 aa-0.34□□□□□ -2.46
CUL3YGR003W PAU4P53427 120 aa-0.34□□□□□ -2.46
CUL3YGR003W PAU10Q03050 120 aa-0.34□□□□□ -2.46
CUL3YGR003W PAU9Q3E770 120 aa-0.34□□□□□ -2.46
CUL3YGR003W HKR1P41809 1802 aa-0.35□□□□□ -2.47
CUL3YGR003W YLR419WQ06698 1435 aaKnown RBP-0.35□□□□□ -2.47
CUL3YGR003W ATX1P38636 73 aa-0.35□□□□□ -2.47
CUL3YGR003W SNA2P56508 79 aa-0.35□□□□□ -2.47
CUL3YGR003W RTR2Q12378 196 aa-0.35□□□□□ -2.47
CUL3YGR003W COX19Q3E731 98 aa-0.35□□□□□ -2.47
CUL3YGR003W RSM19P53733 91 aaPredicted RBP-0.36□□□□□ -2.47
CUL3YGR003W Q0032Q9ZZX7 96 aa-0.36□□□□□ -2.47
CUL3YGR003W HUR1P45820 110 aa-0.36□□□□□ -2.47
CUL3YGR003W NHP10Q03435 203 aa-0.36□□□□□ -2.47
CUL3YGR003W TY1B-BRQ12193 1756 aa-0.37□□□□□ -2.47
CUL3YGR003W LYS2P07702 1392 aa-0.37□□□□□ -2.47
CUL3YGR003W YER039C-AP0CD97 72 aa-0.37□□□□□ -2.47
CUL3YGR003W SRB6P32570 121 aa-0.37□□□□□ -2.47
CUL3YGR003W APS2Q00381 147 aa-0.37□□□□□ -2.47
CUL3YGR003W COX12Q01519 83 aa-0.37□□□□□ -2.47
CUL3YGR003W RPO21P04050 1733 aaKnown RBP-0.37□□□□□ -2.47
CUL3YGR003W SRB8P25648 1427 aa-0.37□□□□□ -2.47
CUL3YGR003W RSF2P46974 1380 aa-0.37□□□□□ -2.47
CUL3YGR003W SPC2Q04969 178 aa-0.37□□□□□ -2.47
CUL3YGR003W RRT15Q3E811 62 aa-0.37□□□□□ -2.47
CUL3YGR003W PAU1P0CE88 120 aa-0.38□□□□□ -2.47
CUL3YGR003W PAU14P0CE89 120 aa-0.38□□□□□ -2.47
CUL3YGR003W YBR292CP38357 123 aa-0.38□□□□□ -2.47
CUL3YGR003W YBR201C-AQ2V2Q3 67 aa-0.38□□□□□ -2.47
CUL3YGR003W BUD4P47136 1447 aa-0.38□□□□□ -2.47
CUL3YGR003W STT4P37297 1900 aa-0.38□□□□□ -2.47
CUL3YGR003W YDR381C-AQ3E6R5 114 aa-0.38□□□□□ -2.47
CUL3YGR003W TOR2P32600 2474 aaKnown RBP-0.39□□□□□ -2.47
CUL3YGR003W PMD1P32634 1753 aa-0.4□□□□□ -2.47
CUL3YGR003W VMA21P41806 77 aa-0.4□□□□□ -2.47
CUL3YGR003W RPL38P49167 78 aaKnown RBP-0.4□□□□□ -2.47
CUL3YGR003W GCN1P33892 2672 aaKnown RBP-0.4□□□□□ -2.47
CUL3YGR003W TY1B-PR2P0C2J0 1756 aa-0.4□□□□□ -2.47
CUL3YGR003W YMR103CQ04436 120 aa-0.4□□□□□ -2.47
CUL3YGR003W GNA1P43577 159 aaPredicted RBP-0.41□□□□□ -2.47
CUL3YGR003W YNL042W-BQ3E7Z2 85 aa-0.41□□□□□ -2.47
Retrieved 100 of 5,963 RNA–protein pairs in 43.1 ms