RNA–Protein interactions for RNA: YDL147W

RPN5, Transcript of Subunit of the CSN and 26S proteasome lid complexes, yeast

Gene RPN5, Length 1,338 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPN5	YDL147W	LYS2	P07702	1392 aa		1.82	□□□□□ -2.12
RPN5	YDL147W	PAU16	P35994	123 aa		1.82	□□□□□ -2.12
RPN5	YDL147W	PAU15	P40585	124 aa		1.82	□□□□□ -2.12
RPN5	YDL147W	YMR090W	Q04304	227 aa	Known RBP	1.82	□□□□□ -2.12
RPN5	YDL147W	YLR419W	Q06698	1435 aa	Known RBP	1.82	□□□□□ -2.12
RPN5	YDL147W	PDR10	P51533	1564 aa		1.82	□□□□□ -2.12
RPN5	YDL147W	UFD4	P33202	1483 aa		1.81	□□□□□ -2.12
RPN5	YDL147W	YLR157W-E	P0CF00	54 aa		1.81	□□□□□ -2.12
RPN5	YDL147W	UBC5	P15732	148 aa		1.81	□□□□□ -2.12
RPN5	YDL147W	TOP2	P06786	1428 aa	Known RBP	1.81	□□□□□ -2.12
RPN5	YDL147W	MMS1	Q06211	1407 aa		1.81	□□□□□ -2.12
RPN5	YDL147W	UBC4	P15731	148 aa		1.8	□□□□□ -2.12
RPN5	YDL147W	YCR101C	P25607	182 aa		1.8	□□□□□ -2.12
RPN5	YDL147W	SRB6	P32570	121 aa		1.79	□□□□□ -2.12
RPN5	YDL147W	YOL118C	Q08259	102 aa		1.79	□□□□□ -2.12
RPN5	YDL147W	XRN1	P22147	1528 aa	Known RBP	1.79	□□□□□ -2.12
RPN5	YDL147W	THO2	P53552	1597 aa	Known RBP	1.78	□□□□□ -2.12
RPN5	YDL147W	YRF1-6	P53819	1859 aa		1.78	□□□□□ -2.12
RPN5	YDL147W	SRB8	P25648	1427 aa		1.77	□□□□□ -2.13
RPN5	YDL147W	SPT6	P23615	1451 aa	Known RBP	1.77	□□□□□ -2.13
RPN5	YDL147W	SIN3	P22579	1536 aa		1.77	□□□□□ -2.13
RPN5	YDL147W	BRR2	P32639	2163 aa	Known RBP	1.77	□□□□□ -2.13
RPN5	YDL147W	CCW14	O13547	238 aa		1.76	□□□□□ -2.13
RPN5	YDL147W	SSN2	P38931	1420 aa		1.76	□□□□□ -2.13
RPN5	YDL147W	TY2B-LR1	P0C2J3	1770 aa		1.76	□□□□□ -2.13
RPN5	YDL147W	TY2B-F	P0CX63	1770 aa		1.76	□□□□□ -2.13
RPN5	YDL147W	TY2B-GR2	P0CX64	1770 aa		1.76	□□□□□ -2.13
RPN5	YDL147W	TY2B-C	P25384	1770 aa		1.76	□□□□□ -2.13
RPN5	YDL147W	TY2B-DR2	Q03494	1770 aa		1.76	□□□□□ -2.13
RPN5	YDL147W	TY1B-DR1	Q03855	1755 aa		1.76	□□□□□ -2.13
RPN5	YDL147W	TY2B-DR3	Q07791	1770 aa	Known RBP	1.76	□□□□□ -2.13
RPN5	YDL147W	TY2B-OR1	Q12113	1770 aa		1.76	□□□□□ -2.13
RPN5	YDL147W	TY2B-DR1	Q12472	1770 aa		1.76	□□□□□ -2.13
RPN5	YDL147W	TY2B-B	Q12491	1770 aa		1.76	□□□□□ -2.13
RPN5	YDL147W	TY2B-OR2	Q12501	1770 aa		1.76	□□□□□ -2.13
RPN5	YDL147W	TY1B-DR3	Q99231	1755 aa		1.76	□□□□□ -2.13
RPN5	YDL147W	MMS22	Q06164	1454 aa		1.76	□□□□□ -2.13
RPN5	YDL147W	IMP2	P46972	177 aa		1.74	□□□□□ -2.13
RPN5	YDL147W	FYV7	Q12247	151 aa		1.74	□□□□□ -2.13
RPN5	YDL147W	HAP1	P0CE41	1502 aa		1.74	□□□□□ -2.13
RPN5	YDL147W	SSK2	P53599	1579 aa		1.74	□□□□□ -2.13
RPN5	YDL147W	BUD4	P47136	1447 aa		1.73	□□□□□ -2.13
RPN5	YDL147W	IQG1	Q12280	1495 aa		1.73	□□□□□ -2.13
RPN5	YDL147W	BNI1	P41832	1953 aa		1.73	□□□□□ -2.13
RPN5	YDL147W	KRE5	P22023	1365 aa		1.72	□□□□□ -2.13
RPN5	YDL147W	GEA1	P47102	1408 aa	Predicted RBP	1.72	□□□□□ -2.13
RPN5	YDL147W	IRC20	Q06554	1556 aa		1.72	□□□□□ -2.13
RPN5	YDL147W	TY1B-DR5	P0C2I2	1755 aa		1.72	□□□□□ -2.13
RPN5	YDL147W	TY1B-DR6	P0C2I3	1755 aa		1.72	□□□□□ -2.13
RPN5	YDL147W	TY1B-LR2	P0C2I5	1755 aa		1.72	□□□□□ -2.13
RPN5	YDL147W	TY1B-LR3	P0C2I6	1755 aa	Known RBP	1.72	□□□□□ -2.13
RPN5	YDL147W	TY1B-PR1	P0C2I9	1755 aa	Known RBP	1.72	□□□□□ -2.13
RPN5	YDL147W	TY1B-PR2	P0C2J0	1756 aa		1.72	□□□□□ -2.13
RPN5	YDL147W	TY1B-PR3	P0C2J1	1755 aa	Known RBP	1.72	□□□□□ -2.13
RPN5	YDL147W	URB1	P34241	1764 aa	Known RBP	1.72	□□□□□ -2.13
RPN5	YDL147W	TY1B-JR1	P47098	1755 aa		1.72	□□□□□ -2.13
RPN5	YDL147W	TY1B-ML2	Q03434	1755 aa	Known RBP	1.72	□□□□□ -2.13
RPN5	YDL147W	TY1B-ER1	Q03612	1755 aa		1.72	□□□□□ -2.13
RPN5	YDL147W	TY1B-ML1	Q04711	1755 aa	Known RBP	1.72	□□□□□ -2.13
RPN5	YDL147W	TY1B-GR2	Q12269	1755 aa		1.72	□□□□□ -2.13
RPN5	YDL147W	TY1B-OL	Q12273	1755 aa		1.72	□□□□□ -2.13
RPN5	YDL147W	TY1B-PL	Q12414	1755 aa	Known RBP	1.72	□□□□□ -2.13
RPN5	YDL147W	BLM10	P43583	2143 aa		1.71	□□□□□ -2.13
RPN5	YDL147W	GCN2	P15442	1659 aa		1.71	□□□□□ -2.14
RPN5	YDL147W	NUP170	P38181	1502 aa		1.71	□□□□□ -2.14
RPN5	YDL147W	REV3	P14284	1504 aa		1.71	□□□□□ -2.14
RPN5	YDL147W	TY3B-I	Q7LHG5	1498 aa	Known RBP	1.71	□□□□□ -2.14
RPN5	YDL147W	YSP2	Q06681	1438 aa		1.7	□□□□□ -2.14
RPN5	YDL147W	MIX14	Q04341	121 aa		1.7	□□□□□ -2.14
RPN5	YDL147W	MLP2	P40457	1679 aa		1.7	□□□□□ -2.14
RPN5	YDL147W	TY1B-BR	Q12193	1756 aa		1.69	□□□□□ -2.14
RPN5	YDL147W	TY1B-GR3	Q12316	1755 aa		1.69	□□□□□ -2.14
RPN5	YDL147W	TY1B-OR	Q92393	1755 aa		1.69	□□□□□ -2.14
RPN5	YDL147W	GDB1	Q06625	1536 aa		1.69	□□□□□ -2.14
RPN5	YDL147W	SMC4	Q12267	1418 aa		1.69	□□□□□ -2.14
RPN5	YDL147W	UTP10	P42945	1769 aa	Known RBP	1.69	□□□□□ -2.14
RPN5	YDL147W	ULS1	Q08562	1619 aa		1.68	□□□□□ -2.14
RPN5	YDL147W	POL2	P21951	2222 aa	Known RBP	1.68	□□□□□ -2.14
RPN5	YDL147W	PDR5	P33302	1511 aa	Known RBP	1.68	□□□□□ -2.14
RPN5	YDL147W	YIL086C	P40503	102 aa		1.67	□□□□□ -2.14
RPN5	YDL147W	COX19	Q3E731	98 aa		1.67	□□□□□ -2.14
RPN5	YDL147W	YKL068W-A	Q3E826	78 aa		1.67	□□□□□ -2.14
RPN5	YDL147W	TY1B-JR2	P47100	1755 aa	Known RBP	1.67	□□□□□ -2.14
RPN5	YDL147W	TY1B-ER2	Q03619	1755 aa		1.67	□□□□□ -2.14
RPN5	YDL147W	TY1B-MR1	Q04214	1755 aa		1.67	□□□□□ -2.14
RPN5	YDL147W	TY1B-MR2	Q04670	1755 aa	Known RBP	1.67	□□□□□ -2.14
RPN5	YDL147W	TY1B-LR1	Q12088	1755 aa	Known RBP	1.67	□□□□□ -2.14
RPN5	YDL147W	TY1B-NL1	Q12112	1755 aa		1.67	□□□□□ -2.14
RPN5	YDL147W	TY1B-GR1	Q12141	1755 aa		1.67	□□□□□ -2.14
RPN5	YDL147W	TY1B-BL	Q12490	1755 aa		1.67	□□□□□ -2.14
RPN5	YDL147W	NTE1	Q04958	1679 aa		1.67	□□□□□ -2.14
RPN5	YDL147W	ESP1	Q03018	1630 aa		1.67	□□□□□ -2.14
RPN5	YDL147W	TY4B-H	P0C2J7	1802 aa		1.67	□□□□□ -2.14
RPN5	YDL147W	ATG2	P53855	1592 aa		1.67	□□□□□ -2.14
RPN5	YDL147W	YCF1	P39109	1515 aa	Known RBP	1.67	□□□□□ -2.14
RPN5	YDL147W	YDR210W	Q03482	75 aa		1.66	□□□□□ -2.14
RPN5	YDL147W	YPL225W	Q08971	146 aa	Known RBP	1.66	□□□□□ -2.14
RPN5	YDL147W	YOR289W	Q12012	251 aa	Predicted RBP	1.66	□□□□□ -2.14
RPN5	YDL147W	YPL038W-A	Q3E7B4	63 aa		1.66	□□□□□ -2.14
RPN5	YDL147W	VPS15	P22219	1454 aa		1.66	□□□□□ -2.14

Retrieved 100 of 5,963 RNA–protein pairs in 15.8 ms