RNA–Protein interactions for RNA: YBR130C

SHE3, Transcript of Protein adaptor between Myo4p and the She2p-mRNA complex, yeastyeast

Gene SHE3, Length 1,278 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHE3YBR130C URA2P07259 2214 aaKnown RBP1.6□□□□□ -2.15
SHE3YBR130C MIX14Q04341 121 aa1.6□□□□□ -2.15
SHE3YBR130C TY3B-IQ7LHG5 1498 aaKnown RBP1.6□□□□□ -2.15
SHE3YBR130C PDR11P40550 1411 aa1.59□□□□□ -2.15
SHE3YBR130C GEA2P39993 1459 aaKnown RBP1.59□□□□□ -2.15
SHE3YBR130C MRPS12P53732 153 aa1.59□□□□□ -2.15
SHE3YBR130C CCW14O13547 238 aa1.58□□□□□ -2.16
SHE3YBR130C IMP2P46972 177 aa1.58□□□□□ -2.16
SHE3YBR130C YRF1-6P53819 1859 aa1.58□□□□□ -2.16
SHE3YBR130C ZEO1Q08245 113 aa1.57□□□□□ -2.16
SHE3YBR130C YPL225WQ08971 146 aaKnown RBP1.57□□□□□ -2.16
SHE3YBR130C SEC7P11075 2009 aaKnown RBP1.56□□□□□ -2.16
SHE3YBR130C YLR307C-AQ3E825 87 aa1.56□□□□□ -2.16
SHE3YBR130C SEC16P48415 2195 aaKnown RBP1.56□□□□□ -2.16
SHE3YBR130C REV3P14284 1504 aa1.56□□□□□ -2.16
SHE3YBR130C CAT8P39113 1433 aa1.55□□□□□ -2.16
SHE3YBR130C COX12Q01519 83 aa1.54□□□□□ -2.16
SHE3YBR130C BUD4P47136 1447 aa1.54□□□□□ -2.16
SHE3YBR130C YLR157W-EP0CF00 54 aa1.53□□□□□ -2.16
SHE3YBR130C URB1P34241 1764 aaKnown RBP1.52□□□□□ -2.17
SHE3YBR130C YIL086CP40503 102 aa1.52□□□□□ -2.17
SHE3YBR130C COX19Q3E731 98 aa1.52□□□□□ -2.17
SHE3YBR130C YPL038W-AQ3E7B4 63 aa1.52□□□□□ -2.17
SHE3YBR130C KSH1Q8TGJ3 72 aa1.52□□□□□ -2.17
SHE3YBR130C YHL005CP38752 130 aa1.51□□□□□ -2.17
SHE3YBR130C YCR095W-AQ3E787 52 aa1.51□□□□□ -2.17
SHE3YBR130C BRR2P32639 2163 aaKnown RBP1.51□□□□□ -2.17
SHE3YBR130C YBR072C-AQ3E794 53 aa1.5□□□□□ -2.17
SHE3YBR130C TOP2P06786 1428 aaKnown RBP1.49□□□□□ -2.17
SHE3YBR130C SHU1P38751 150 aa1.49□□□□□ -2.17
SHE3YBR130C SNA2P56508 79 aa1.49□□□□□ -2.17
SHE3YBR130C BPT1P14772 1559 aa1.49□□□□□ -2.17
SHE3YBR130C MRP17P28778 131 aa1.48□□□□□ -2.17
SHE3YBR130C EMC5P40540 141 aa1.48□□□□□ -2.17
SHE3YBR130C RSM19P53733 91 aaPredicted RBP1.48□□□□□ -2.17
SHE3YBR130C YDR210WQ03482 75 aa1.47□□□□□ -2.17
SHE3YBR130C SRB8P25648 1427 aa1.47□□□□□ -2.17
SHE3YBR130C TY4B-HP0C2J7 1802 aa1.47□□□□□ -2.17
SHE3YBR130C YLR255CO13574 117 aa1.46□□□□□ -2.18
SHE3YBR130C ROX3P25046 220 aa1.46□□□□□ -2.18
SHE3YBR130C MPC2P38857 129 aa1.46□□□□□ -2.18
SHE3YBR130C YDR010CQ12426 110 aa1.46□□□□□ -2.18
SHE3YBR130C PRP8P33334 2413 aaKnown RBP1.46□□□□□ -2.18
SHE3YBR130C PAU5P43575 122 aa1.45□□□□□ -2.18
SHE3YBR130C YOR289WQ12012 251 aaPredicted RBP1.45□□□□□ -2.18
SHE3YBR130C YHR173CP38864 112 aa1.44□□□□□ -2.18
SHE3YBR130C GCV3P39726 170 aaPredicted RBP1.44□□□□□ -2.18
SHE3YBR130C RSF2P46974 1380 aa1.44□□□□□ -2.18
SHE3YBR130C HMRA1P0CY11 126 aa1.43□□□□□ -2.18
SHE3YBR130C MRX7P53869 86 aa1.43□□□□□ -2.18
SHE3YBR130C AIM19P40502 157 aa1.41□□□□□ -2.18
SHE3YBR130C MSL1P40567 111 aaPredicted RBP1.41□□□□□ -2.18
SHE3YBR130C NTE1Q04958 1679 aa1.41□□□□□ -2.18
SHE3YBR130C MYO1P08964 1928 aa1.4□□□□□ -2.18
SHE3YBR130C POL2P21951 2222 aaKnown RBP1.4□□□□□ -2.18
SHE3YBR130C AUA1P32450 94 aa1.4□□□□□ -2.19
SHE3YBR130C YBR292CP38357 123 aa1.4□□□□□ -2.19
SHE3YBR130C ICY1Q04329 127 aa1.39□□□□□ -2.19
SHE3YBR130C SSN2P38931 1420 aa1.39□□□□□ -2.19
SHE3YBR130C BLM10P43583 2143 aa1.39□□□□□ -2.19
SHE3YBR130C BNI1P41832 1953 aa1.38□□□□□ -2.19
SHE3YBR130C PAU20Q08322 120 aa1.38□□□□□ -2.19
SHE3YBR130C SUS1Q6WNK7 96 aa1.38□□□□□ -2.19
SHE3YBR130C PAU6P0CE90 120 aa1.37□□□□□ -2.19
SHE3YBR130C PAU18P0CE91 120 aa1.37□□□□□ -2.19
SHE3YBR130C YBL071CP38185 102 aa1.36□□□□□ -2.19
SHE3YBR130C SNU13P39990 126 aaKnown RBP1.36□□□□□ -2.19
SHE3YBR130C MRPL38P35996 138 aaPredicted RBP1.35□□□□□ -2.19
SHE3YBR130C RSM18P40033 138 aa1.35□□□□□ -2.19
SHE3YBR130C PAU1P0CE88 120 aa1.34□□□□□ -2.19
SHE3YBR130C PAU14P0CE89 120 aa1.34□□□□□ -2.19
SHE3YBR130C PAU8P0CE92 120 aa1.34□□□□□ -2.19
SHE3YBR130C PAU11P0CE93 120 aa1.34□□□□□ -2.19
SHE3YBR130C PAU13P38725 120 aa1.34□□□□□ -2.19
SHE3YBR130C PAU10Q03050 120 aa1.34□□□□□ -2.19
SHE3YBR130C PAU9Q3E770 120 aa1.34□□□□□ -2.19
SHE3YBR130C YNR034W-AQ3E841 98 aa1.34□□□□□ -2.19
SHE3YBR130C YDR029WQ12111 104 aa1.33□□□□□ -2.2
SHE3YBR130C RPS11AP0CX47 156 aaKnown RBP1.32□□□□□ -2.2
SHE3YBR130C RPS11BP0CX48 156 aaKnown RBP1.32□□□□□ -2.2
SHE3YBR130C RRT15Q3E811 62 aa1.32□□□□□ -2.2
SHE3YBR130C RPA190P10964 1664 aaKnown RBP1.32□□□□□ -2.2
SHE3YBR130C PAU4P53427 120 aa1.31□□□□□ -2.2
SHE3YBR130C NHP10Q03435 203 aa1.31□□□□□ -2.2
SHE3YBR130C YCL001W-BQ96VH2 84 aa1.31□□□□□ -2.2
SHE3YBR130C SPC1P46965 94 aa1.3□□□□□ -2.2
SHE3YBR130C YRF1-1P0CX20 1796 aa1.29□□□□□ -2.2
SHE3YBR130C YRF1-5P0CX21 1796 aa1.29□□□□□ -2.2
SHE3YBR130C YRF1-8P0CX22 1796 aa1.29□□□□□ -2.2
SHE3YBR130C YDR042CQ03205 200 aa1.29□□□□□ -2.2
SHE3YBR130C MHF2Q3E829 80 aa1.29□□□□□ -2.2
SHE3YBR130C YCR075W-AQ3E830 75 aa1.29□□□□□ -2.2
SHE3YBR130C PDX3P38075 228 aaKnown RBP1.28□□□□□ -2.2
SHE3YBR130C RPS29BP41058 56 aaKnown RBP1.28□□□□□ -2.2
SHE3YBR130C YOL164W-AQ3E7A5 60 aa1.28□□□□□ -2.2
SHE3YBR130C PDR10P51533 1564 aa1.25□□□□□ -2.21
SHE3YBR130C ECM12O13529 151 aa1.24□□□□□ -2.21
SHE3YBR130C RIM15P43565 1770 aa1.24□□□□□ -2.21
SHE3YBR130C FAS2P19097 1887 aaKnown RBP1.23□□□□□ -2.21
SHE3YBR130C BSC4P53841 131 aa1.23□□□□□ -2.21
Retrieved 100 of 5,963 RNA–protein pairs in 18.8 ms