RNA–Protein interactions for RNA: YAL059W

ECM1, Transcript of Pre-ribosomal factor involved in 60S ribosomal protein subunit export, yeast

Gene ECM1, Length 639 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ECM1	YAL059W	POR2	P40478	281 aa		3.22	□□□□□ -1.89
ECM1	YAL059W	POC4	Q12245	148 aa	Predicted RBP	3.22	□□□□□ -1.89
ECM1	YAL059W	ECM29	P38737	1868 aa		3.22	□□□□□ -1.89
ECM1	YAL059W	PFY1	P07274	126 aa		3.21	□□□□□ -1.9
ECM1	YAL059W	LSM2	P38203	95 aa	Known RBP	3.21	□□□□□ -1.9
ECM1	YAL059W	ICY1	Q04329	127 aa		3.21	□□□□□ -1.9
ECM1	YAL059W	CYR1	P08678	2026 aa	Known RBP	3.2	□□□□□ -1.9
ECM1	YAL059W	DNA2	P38859	1522 aa		3.2	□□□□□ -1.9
ECM1	YAL059W	FLO9	P39712	1322 aa		3.19	□□□□□ -1.9
ECM1	YAL059W	LST8	P41318	303 aa		3.19	□□□□□ -1.9
ECM1	YAL059W	SED1	Q01589	338 aa		3.19	□□□□□ -1.9
ECM1	YAL059W	TAR1	Q8TGM6	124 aa		3.19	□□□□□ -1.9
ECM1	YAL059W	SIN3	P22579	1536 aa		3.19	□□□□□ -1.9
ECM1	YAL059W	DOP1	Q03921	1698 aa		3.18	□□□□□ -1.9
ECM1	YAL059W	YGL014C-A	P0C5N1	53 aa		3.18	□□□□□ -1.9
ECM1	YAL059W	PAU5	P43575	122 aa		3.18	□□□□□ -1.9
ECM1	YAL059W	IMP2	P46972	177 aa		3.18	□□□□□ -1.9
ECM1	YAL059W	ROX3	P25046	220 aa		3.17	□□□□□ -1.9
ECM1	YAL059W	YPR096C	O13587	100 aa		3.16	□□□□□ -1.9
ECM1	YAL059W	TOM6	P33448	61 aa		3.16	□□□□□ -1.9
ECM1	YAL059W	MIX17	Q03667	156 aa		3.16	□□□□□ -1.9
ECM1	YAL059W	YMR321C	Q04898	105 aa		3.16	□□□□□ -1.9
ECM1	YAL059W	YOL118C	Q08259	102 aa		3.16	□□□□□ -1.9
ECM1	YAL059W	PAI3	P01094	68 aa		3.15	□□□□□ -1.91
ECM1	YAL059W	HMRA2	P0CY13	119 aa		3.15	□□□□□ -1.91
ECM1	YAL059W	ICS3	P47034	131 aa		3.15	□□□□□ -1.91
ECM1	YAL059W	YMR122C	Q03879	124 aa		3.15	□□□□□ -1.91
ECM1	YAL059W	VAM10	Q08474	114 aa		3.15	□□□□□ -1.91
ECM1	YAL059W	PRM3	Q08931	133 aa		3.15	□□□□□ -1.91
ECM1	YAL059W	TY1B-DR4	Q07793	1604 aa		3.15	□□□□□ -1.91
ECM1	YAL059W	SLH1	P53327	1967 aa	Known RBP	3.14	□□□□□ -1.91
ECM1	YAL059W	TCB3	Q03640	1545 aa	Known RBP	3.14	□□□□□ -1.91
ECM1	YAL059W	RPL33A	P05744	107 aa	Known RBP	3.14	□□□□□ -1.91
ECM1	YAL059W	RPL22A	P05749	121 aa	Known RBP	3.14	□□□□□ -1.91
ECM1	YAL059W	RPS22A	P0C0W1	130 aa	Known RBP	3.14	□□□□□ -1.91
ECM1	YAL059W	YBR013C	P38215	129 aa		3.14	□□□□□ -1.91
ECM1	YAL059W	YHL037C	P38733	133 aa		3.14	□□□□□ -1.91
ECM1	YAL059W	COA4	Q05809	96 aa		3.14	□□□□□ -1.91
ECM1	YAL059W	YCL048W-A	Q2V2Q2	79 aa		3.14	□□□□□ -1.91
ECM1	YAL059W	FAB1	P34756	2278 aa		3.14	□□□□□ -1.91
ECM1	YAL059W	POL1	P13382	1468 aa		3.14	□□□□□ -1.91
ECM1	YAL059W	YLR285C-A	Q3E771	56 aa		3.13	□□□□□ -1.91
ECM1	YAL059W	SCC2	Q04002	1493 aa		3.13	□□□□□ -1.91
ECM1	YAL059W	MHF2	Q3E829	80 aa		3.12	□□□□□ -1.91
ECM1	YAL059W	TY1B-JR2	P47100	1755 aa	Known RBP	3.12	□□□□□ -1.91
ECM1	YAL059W	TY1B-ER2	Q03619	1755 aa		3.12	□□□□□ -1.91
ECM1	YAL059W	TY1B-MR1	Q04214	1755 aa		3.12	□□□□□ -1.91
ECM1	YAL059W	TY1B-MR2	Q04670	1755 aa	Known RBP	3.12	□□□□□ -1.91
ECM1	YAL059W	TY1B-LR1	Q12088	1755 aa	Known RBP	3.12	□□□□□ -1.91
ECM1	YAL059W	TY1B-NL1	Q12112	1755 aa		3.12	□□□□□ -1.91
ECM1	YAL059W	TY1B-GR1	Q12141	1755 aa		3.12	□□□□□ -1.91
ECM1	YAL059W	TY1B-BL	Q12490	1755 aa		3.12	□□□□□ -1.91
ECM1	YAL059W	TY4B-J	P47024	1803 aa		3.12	□□□□□ -1.91
ECM1	YAL059W	MMS22	Q06164	1454 aa		3.11	□□□□□ -1.91
ECM1	YAL059W	RRP5	Q05022	1729 aa	Known RBP	3.11	□□□□□ -1.91
ECM1	YAL059W	AIM4	P38305	123 aa	Predicted RBP	3.11	□□□□□ -1.91
ECM1	YAL059W	YEL008W	P40001	126 aa		3.11	□□□□□ -1.91
ECM1	YAL059W	LSM6	Q06406	86 aa	Known RBP	3.11	□□□□□ -1.91
ECM1	YAL059W	YCR095W-A	Q3E787	52 aa		3.11	□□□□□ -1.91
ECM1	YAL059W	YDR119W-A	Q2V2P9	66 aa		3.1	□□□□□ -1.91
ECM1	YAL059W	SMC4	Q12267	1418 aa		3.1	□□□□□ -1.91
ECM1	YAL059W	YIL163C	P40448	117 aa		3.09	□□□□□ -1.91
ECM1	YAL059W	STT4	P37297	1900 aa		3.09	□□□□□ -1.92
ECM1	YAL059W	XRN1	P22147	1528 aa	Known RBP	3.09	□□□□□ -1.92
ECM1	YAL059W	SWM2	P40342	146 aa		3.08	□□□□□ -1.92
ECM1	YAL059W	NTE1	Q04958	1679 aa		3.08	□□□□□ -1.92
ECM1	YAL059W	YSF3	P0C074	85 aa	Predicted RBP	3.07	□□□□□ -1.92
ECM1	YAL059W	YFR010W-A	P0C5N0	62 aa		3.07	□□□□□ -1.92
ECM1	YAL059W	NHP2	P32495	156 aa	Predicted RBP	3.07	□□□□□ -1.92
ECM1	YAL059W	VPS55	P47111	140 aa		3.07	□□□□□ -1.92
ECM1	YAL059W	PRM7	Q12459	698 aa		3.07	□□□□□ -1.92
ECM1	YAL059W	CCW14	O13547	238 aa		3.06	□□□□□ -1.92
ECM1	YAL059W	YCL042W	P25572	119 aa		3.06	□□□□□ -1.92
ECM1	YAL059W	MRP17	P28778	131 aa		3.06	□□□□□ -1.92
ECM1	YAL059W	YBR219C	P38317	127 aa		3.06	□□□□□ -1.92
ECM1	YAL059W	MIC27	P50945	234 aa		3.06	□□□□□ -1.92
ECM1	YAL059W	SNA2	P56508	79 aa		3.06	□□□□□ -1.92
ECM1	YAL059W	YOR343C	Q12484	108 aa		3.06	□□□□□ -1.92
ECM1	YAL059W	YDR381C-A	Q3E6R5	114 aa		3.06	□□□□□ -1.92
ECM1	YAL059W	RPS22B	Q3E7Y3	130 aa	Known RBP	3.06	□□□□□ -1.92
ECM1	YAL059W	YRF1-1	P0CX20	1796 aa		3.05	□□□□□ -1.92
ECM1	YAL059W	YRF1-5	P0CX21	1796 aa		3.05	□□□□□ -1.92
ECM1	YAL059W	YRF1-8	P0CX22	1796 aa		3.05	□□□□□ -1.92
ECM1	YAL059W	MRPL38	P35996	138 aa	Predicted RBP	3.05	□□□□□ -1.92
ECM1	YAL059W	YLR162W	Q06235	118 aa		3.05	□□□□□ -1.92
ECM1	YAL059W	COA3	Q3E7B2	85 aa		3.05	□□□□□ -1.92
ECM1	YAL059W	YNL146C-A	Q3E7Z1	64 aa		3.05	□□□□□ -1.92
ECM1	YAL059W	FKS3	Q04952	1785 aa		3.05	□□□□□ -1.92
ECM1	YAL059W	YHR214C-D	P0CX93	97 aa		3.03	□□□□□ -1.92
ECM1	YAL059W	IRC21	Q04772	201 aa		3.03	□□□□□ -1.92
ECM1	YAL059W	SPC1	P46965	94 aa		3.02	□□□□□ -1.93
ECM1	YAL059W	YPR145C-A	Q2V2P0	78 aa		3.02	□□□□□ -1.93
ECM1	YAL059W	YHR086W-A	Q3E746	53 aa		3.02	□□□□□ -1.93
ECM1	YAL059W	DNF1	P32660	1571 aa		3.01	□□□□□ -1.93
ECM1	YAL059W	ATX1	P38636	73 aa		3.01	□□□□□ -1.93
ECM1	YAL059W	CCW12	Q12127	133 aa		3.01	□□□□□ -1.93
ECM1	YAL059W	YGL041C-B	Q3E750	60 aa		3.01	□□□□□ -1.93
ECM1	YAL059W	MON2	P48563	1636 aa	Predicted RBP	3.01	□□□□□ -1.93
ECM1	YAL059W	PMD1	P32634	1753 aa		3	□□□□□ -1.93
ECM1	YAL059W	YBL071C	P38185	102 aa		3	□□□□□ -1.93

Retrieved 100 of 5,963 RNA–protein pairs in 79.3 ms