RNA–Protein interactions for RNA: YPL211W

NIP7, Transcript of Nucleolar protein required for 60S ribosome subunit biogenesis, yeastyeast

Gene NIP7, Length 546 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NIP7YPL211W APS2Q00381 147 aa2.42□□□□□ -2.02
NIP7YPL211W COX12Q01519 83 aa2.42□□□□□ -2.02
NIP7YPL211W UTP23Q12339 254 aaKnown RBP2.42□□□□□ -2.02
NIP7YPL211W YLR118CQ12354 227 aa2.42□□□□□ -2.02
NIP7YPL211W YCL001W-BQ96VH2 84 aa2.42□□□□□ -2.02
NIP7YPL211W RPL2AP0CX45 254 aaKnown RBP2.41□□□□□ -2.02
NIP7YPL211W RPL2BP0CX46 254 aaKnown RBP2.41□□□□□ -2.02
NIP7YPL211W RPS11AP0CX47 156 aaKnown RBP2.41□□□□□ -2.02
NIP7YPL211W RPS11BP0CX48 156 aaKnown RBP2.41□□□□□ -2.02
NIP7YPL211W NHP6AP11632 93 aaKnown RBP2.41□□□□□ -2.02
NIP7YPL211W YGL010WP25338 174 aa2.41□□□□□ -2.02
NIP7YPL211W QRI5P32344 111 aa2.41□□□□□ -2.02
NIP7YPL211W AUA1P32450 94 aa2.41□□□□□ -2.02
NIP7YPL211W PAU15P40585 124 aa2.41□□□□□ -2.02
NIP7YPL211W YFR035CP43608 114 aa2.41□□□□□ -2.02
NIP7YPL211W COX16P47081 118 aa2.41□□□□□ -2.02
NIP7YPL211W DAN1P47178 298 aa2.41□□□□□ -2.02
NIP7YPL211W MGA1P53050 456 aa2.41□□□□□ -2.02
NIP7YPL211W GIM5Q04493 163 aa2.41□□□□□ -2.02
NIP7YPL211W YOP1Q12402 180 aa2.41□□□□□ -2.02
NIP7YPL211W YOL085CQ99345 113 aa2.41□□□□□ -2.02
NIP7YPL211W VAR1P02381 398 aa2.4□□□□□ -2.03
NIP7YPL211W RPL12AP0CX53 165 aaKnown RBP2.4□□□□□ -2.03
NIP7YPL211W RPL12BP0CX54 165 aa2.4□□□□□ -2.03
NIP7YPL211W HMRA1P0CY11 126 aa2.4□□□□□ -2.03
NIP7YPL211W MRPL31P14063 131 aaPredicted RBP2.4□□□□□ -2.03
NIP7YPL211W CUP2P15315 225 aa2.4□□□□□ -2.03
NIP7YPL211W YRA2P36036 203 aaKnown RBP RIP-Chip data2.4□□□□□ -2.03not detected
NIP7YPL211W NRG2P38082 220 aa2.4□□□□□ -2.03
NIP7YPL211W RPB11P38902 120 aa2.4□□□□□ -2.03
NIP7YPL211W VHS2P40463 436 aa2.4□□□□□ -2.03
NIP7YPL211W KEG1P43614 200 aa2.4□□□□□ -2.03
NIP7YPL211W HHO1P53551 258 aa2.4□□□□□ -2.03
NIP7YPL211W UPS3Q04006 179 aa2.4□□□□□ -2.03
NIP7YPL211W ZEO1Q08245 113 aa2.4□□□□□ -2.03
NIP7YPL211W TIM22Q12328 207 aa2.4□□□□□ -2.03
NIP7YPL211W SNU23Q12368 194 aaPredicted RBP2.4□□□□□ -2.03
NIP7YPL211W YCR024C-BQ3E7Z8 88 aa2.4□□□□□ -2.03
NIP7YPL211W ADH1P00330 348 aaKnown RBP2.39□□□□□ -2.03
NIP7YPL211W PAM17P36147 197 aa2.39□□□□□ -2.03
NIP7YPL211W DAD2P36162 133 aa2.39□□□□□ -2.03
NIP7YPL211W PAU7P39545 55 aa2.39□□□□□ -2.03
NIP7YPL211W NSE4P43124 402 aa2.39□□□□□ -2.03
NIP7YPL211W PAU5P43575 122 aa2.39□□□□□ -2.03
NIP7YPL211W YPS5P53057 165 aa2.39□□□□□ -2.03
NIP7YPL211W YGR026WP53217 278 aa2.39□□□□□ -2.03
NIP7YPL211W DIA1P54005 336 aa2.39□□□□□ -2.03
NIP7YPL211W YDR366CP87287 132 aa2.39□□□□□ -2.03
NIP7YPL211W CSM4Q08955 156 aa2.39□□□□□ -2.03
NIP7YPL211W YNR034W-AQ3E841 98 aa2.39□□□□□ -2.03
NIP7YPL211W Q0255P03881 472 aa2.38□□□□□ -2.03
NIP7YPL211W RPL27AP0C2H6 136 aaKnown RBP2.38□□□□□ -2.03
NIP7YPL211W YCR001WP25347 104 aa2.38□□□□□ -2.03
NIP7YPL211W RPL16BP26785 198 aaKnown RBP2.38□□□□□ -2.03
NIP7YPL211W IRC22P40006 225 aa2.38□□□□□ -2.03
NIP7YPL211W GTT1P40582 234 aa2.38□□□□□ -2.03
NIP7YPL211W BRP1P53194 125 aa2.38□□□□□ -2.03
NIP7YPL211W YGR017WP53210 297 aa2.38□□□□□ -2.03
NIP7YPL211W THG1P53215 237 aaKnown RBP2.38□□□□□ -2.03
NIP7YPL211W ARC18Q05933 178 aaKnown RBP2.38□□□□□ -2.03
NIP7YPL211W RDS3Q06835 107 aaPredicted RBP2.38□□□□□ -2.03
NIP7YPL211W YBR200W-AQ3E755 54 aa2.38□□□□□ -2.03
NIP7YPL211W PAU19P0CE85 124 aa2.37□□□□□ -2.03
NIP7YPL211W PAU21P0CE86 164 aa2.37□□□□□ -2.03
NIP7YPL211W PAU22P0CE87 164 aa2.37□□□□□ -2.03
NIP7YPL211W PAU3P25610 124 aa2.37□□□□□ -2.03
NIP7YPL211W ZRT1P32804 376 aa2.37□□□□□ -2.03
NIP7YPL211W YBR013CP38215 129 aa2.37□□□□□ -2.03
NIP7YPL211W YHR140WP38842 239 aa2.37□□□□□ -2.03
NIP7YPL211W RRT13P40042 185 aa2.37□□□□□ -2.03
NIP7YPL211W YCH1P42937 148 aa2.37□□□□□ -2.03
NIP7YPL211W SGF11Q03067 99 aa2.37□□□□□ -2.03
NIP7YPL211W AIM34Q03673 198 aa2.37□□□□□ -2.03
NIP7YPL211W YML108WQ03759 105 aa2.37□□□□□ -2.03
NIP7YPL211W GPI19Q04082 140 aa2.37□□□□□ -2.03
NIP7YPL211W GTO3Q04806 366 aa2.37□□□□□ -2.03
NIP7YPL211W VAM10Q08474 114 aa2.37□□□□□ -2.03
NIP7YPL211W POM33Q12164 279 aa2.37□□□□□ -2.03
NIP7YPL211W YCR075W-AQ3E830 75 aa2.37□□□□□ -2.03
NIP7YPL211W RPL23AP0CX41 137 aaKnown RBP2.36□□□□□ -2.03
NIP7YPL211W RPL23BP0CX42 137 aaKnown RBP2.36□□□□□ -2.03
NIP7YPL211W SUR2P38992 349 aa2.36□□□□□ -2.03
NIP7YPL211W IGD1P43598 195 aa2.36□□□□□ -2.03
NIP7YPL211W SDS23P53172 527 aa2.36□□□□□ -2.03
NIP7YPL211W TIM11P81449 96 aaPredicted RBP2.36□□□□□ -2.03
NIP7YPL211W DXO1Q06349 442 aa2.36□□□□□ -2.03
NIP7YPL211W RPS22BQ3E7Y3 130 aaKnown RBP2.36□□□□□ -2.03
NIP7YPL211W POR1P04840 283 aaKnown RBP2.35□□□□□ -2.03
NIP7YPL211W MRPL28P36527 147 aa2.35□□□□□ -2.03
NIP7YPL211W TVP18Q04767 167 aa2.35□□□□□ -2.03
NIP7YPL211W YLR042CQ07990 161 aa2.35□□□□□ -2.03
NIP7YPL211W FSF1Q12029 327 aaKnown RBP2.35□□□□□ -2.03
NIP7YPL211W SEC4P07560 215 aaKnown RBP2.34□□□□□ -2.03
NIP7YPL211W YCR023CP25351 611 aa2.34□□□□□ -2.03
NIP7YPL211W YKR032WP36127 104 aa2.34□□□□□ -2.03
NIP7YPL211W YNL217WP40152 326 aa2.34□□□□□ -2.03
NIP7YPL211W CYT2Q00873 224 aa2.34□□□□□ -2.03
NIP7YPL211W DGA1Q08650 418 aa2.34□□□□□ -2.03
NIP7YPL211W WIP1Q2V2P8 89 aa2.34□□□□□ -2.03
NIP7YPL211W YGR240C-AQ3E786 66 aa2.34□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 13.6 ms