RNA–Protein interactions for RNA: YNL224C

SQS1, Transcript of Protein that stimulates the ATPase and helicase activities of Prp43p, yeastyeast

Gene SQS1, Length 2,304 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SQS1YNL224C HTD2P38790 280 aaKnown RBP2.65□□□□□ -1.99
SQS1YNL224C TPC1P53257 314 aa2.65□□□□□ -1.99
SQS1YNL224C ELP6Q04868 273 aa2.65□□□□□ -1.99
SQS1YNL224C FYV12Q08559 129 aa2.65□□□□□ -1.99
SQS1YNL224C PCL9Q12477 304 aa2.65□□□□□ -1.99
SQS1YNL224C YML100W-AQ8TGT0 57 aa2.65□□□□□ -1.99
SQS1YNL224C MDM35O60200 86 aa2.64□□□□□ -1.99
SQS1YNL224C YCR006CP25350 157 aa2.64□□□□□ -1.99
SQS1YNL224C RPB9P27999 122 aa2.64□□□□□ -1.99
SQS1YNL224C IMP1P28627 190 aa2.64□□□□□ -1.99
SQS1YNL224C TDA2P40045 126 aa2.64□□□□□ -1.99
SQS1YNL224C VPS55P47111 140 aa2.64□□□□□ -1.99
SQS1YNL224C POP3P53833 195 aaPredicted RBP2.64□□□□□ -1.99
SQS1YNL224C MZM1Q03429 123 aaPredicted RBP2.64□□□□□ -1.99
SQS1YNL224C USV1Q12132 391 aa2.64□□□□□ -1.99
SQS1YNL224C ASK1P35734 292 aa2.64□□□□□ -1.99
SQS1YNL224C VTC1P40046 129 aaRIP-Chip data2.64□□□□□ -1.99not detected
SQS1YNL224C YIL169CP40442 995 aa2.64□□□□□ -1.99
SQS1YNL224C PGU1P47180 361 aa2.64□□□□□ -1.99
SQS1YNL224C PCP1P53259 346 aa2.64□□□□□ -1.99
SQS1YNL224C SWT21P53873 357 aaPredicted RBP2.64□□□□□ -1.99
SQS1YNL224C ICY1Q04329 127 aa2.64□□□□□ -1.99
SQS1YNL224C BPH1P25356 2167 aa2.63□□□□□ -1.99
SQS1YNL224C MOT1P32333 1867 aa2.63□□□□□ -1.99
SQS1YNL224C HAL1Q01766 294 aa2.63□□□□□ -1.99
SQS1YNL224C TDA8Q6B2U8 126 aa2.63□□□□□ -1.99
SQS1YNL224C YKR045CP36138 183 aa2.63□□□□□ -1.99
SQS1YNL224C TVP15Q03860 143 aa2.63□□□□□ -1.99
SQS1YNL224C MET32Q12041 191 aa2.63□□□□□ -1.99
SQS1YNL224C COX19Q3E731 98 aa2.63□□□□□ -1.99
SQS1YNL224C YER145C-AA0A023PYF4 145 aa2.62□□□□□ -1.99
SQS1YNL224C PAU2P32612 120 aa2.62□□□□□ -1.99
SQS1YNL224C MRPL39P36533 70 aa2.62□□□□□ -1.99
SQS1YNL224C YEL028WP39989 153 aa2.62□□□□□ -1.99
SQS1YNL224C CIS3P47001 227 aa2.62□□□□□ -1.99
SQS1YNL224C ICS3P47034 131 aa2.62□□□□□ -1.99
SQS1YNL224C YGL262WP53054 175 aa2.62□□□□□ -1.99
SQS1YNL224C HPA2Q06592 156 aa2.62□□□□□ -1.99
SQS1YNL224C YDR381C-AQ3E6R5 114 aa2.62□□□□□ -1.99
SQS1YNL224C YPL038W-AQ3E7B4 63 aa2.62□□□□□ -1.99
SQS1YNL224C CYR1P08678 2026 aaKnown RBP2.62□□□□□ -1.99
SQS1YNL224C RIM2P38127 377 aa2.62□□□□□ -1.99
SQS1YNL224C EDC2P40023 145 aaPredicted RBP2.62□□□□□ -1.99
SQS1YNL224C PAU12P53343 120 aa2.62□□□□□ -1.99
SQS1YNL224C YOL014WQ08110 124 aa2.62□□□□□ -1.99
SQS1YNL224C YOR105WQ08504 108 aa2.62□□□□□ -1.99
SQS1YNL224C YOR015WQ12169 119 aa2.62□□□□□ -1.99
SQS1YNL224C NUP192P47054 1683 aa2.61□□□□□ -1.99
SQS1YNL224C FKS3Q04952 1785 aa2.61□□□□□ -1.99
SQS1YNL224C RPS14AP06367 137 aaKnown RBP2.61□□□□□ -1.99
SQS1YNL224C MRPL31P14063 131 aaPredicted RBP2.61□□□□□ -1.99
SQS1YNL224C ATP15P21306 62 aa2.61□□□□□ -1.99
SQS1YNL224C FPR2P32472 135 aa2.61□□□□□ -1.99
SQS1YNL224C FZF1P32805 299 aa2.61□□□□□ -1.99
SQS1YNL224C RPS14BP39516 138 aaKnown RBP2.61□□□□□ -1.99
SQS1YNL224C APC1P53886 1748 aa2.61□□□□□ -1.99
SQS1YNL224C YDR274CP87283 123 aa2.61□□□□□ -1.99
SQS1YNL224C MIX14Q04341 121 aa2.61□□□□□ -1.99
SQS1YNL224C LPP1Q04396 274 aa2.61□□□□□ -1.99
SQS1YNL224C GSC2P40989 1895 aa2.61□□□□□ -1.99
SQS1YNL224C FLO5P38894 1075 aa2.6□□□□□ -1.99
SQS1YNL224C DFG10P40526 253 aa2.6□□□□□ -1.99
SQS1YNL224C NRM1P53718 249 aa2.6□□□□□ -1.99
SQS1YNL224C LSM6Q06406 86 aaKnown RBP2.6□□□□□ -1.99
SQS1YNL224C BUD3P25558 1636 aa2.6□□□□□ -1.99
SQS1YNL224C FKS1P38631 1876 aaKnown RBP2.6□□□□□ -1.99
SQS1YNL224C PAU24P38155 120 aa2.6□□□□□ -1.99
SQS1YNL224C RPL21AQ02753 160 aaKnown RBP2.6□□□□□ -1.99
SQS1YNL224C YMR181CQ03231 154 aa2.6□□□□□ -1.99
SQS1YNL224C YMR295CQ03559 197 aa2.6□□□□□ -1.99
SQS1YNL224C RPL21BQ12672 160 aaKnown RBP2.6□□□□□ -1.99
SQS1YNL224C YER187WP40102 141 aa2.59□□□□□ -1.99
SQS1YNL224C YML079WQ03629 201 aa2.59□□□□□ -1.99
SQS1YNL224C YPR011CQ12251 326 aa2.59□□□□□ -1.99
SQS1YNL224C RPL42AP0CX27 106 aaKnown RBP2.58□□□□□ -2
SQS1YNL224C RPL42BP0CX28 106 aaKnown RBP2.58□□□□□ -2
SQS1YNL224C FYV5P25585 152 aa2.58□□□□□ -2
SQS1YNL224C YBR209WP38311 105 aa2.58□□□□□ -2
SQS1YNL224C YAR068WP39564 161 aa2.58□□□□□ -2
SQS1YNL224C RSM18P40033 138 aa2.58□□□□□ -2
SQS1YNL224C URM1P40554 99 aaPredicted RBP2.58□□□□□ -2
SQS1YNL224C PIR1Q03178 341 aa2.58□□□□□ -2
SQS1YNL224C ATP20Q12233 115 aa2.58□□□□□ -2
SQS1YNL224C SMT3Q12306 101 aaKnown RBP2.58□□□□□ -2
SQS1YNL224C AGA1P32323 725 aa2.57□□□□□ -2
SQS1YNL224C YCR041WP37265 110 aa2.57□□□□□ -2
SQS1YNL224C DSE2P38844 325 aa2.57□□□□□ -2
SQS1YNL224C COX12Q01519 83 aa2.57□□□□□ -2
SQS1YNL224C EMI1Q04406 187 aa2.57□□□□□ -2
SQS1YNL224C TIM22Q12328 207 aa2.57□□□□□ -2
SQS1YNL224C RPL26AP05743 127 aaKnown RBP2.57□□□□□ -2
SQS1YNL224C PFY1P07274 126 aa2.57□□□□□ -2
SQS1YNL224C RPL23AP0CX41 137 aaKnown RBP2.57□□□□□ -2
SQS1YNL224C RPL23BP0CX42 137 aaKnown RBP2.57□□□□□ -2
SQS1YNL224C HUR1P45820 110 aa2.57□□□□□ -2
SQS1YNL224C YIL014C-AQ02598 104 aa2.57□□□□□ -2
SQS1YNL224C YBL008W-AQ3E821 79 aa2.57□□□□□ -2
SQS1YNL224C MSA2P36157 363 aa2.56□□□□□ -2
SQS1YNL224C TVP23P38962 199 aa2.56□□□□□ -2
SQS1YNL224C NCA3P46955 337 aa2.56□□□□□ -2
Retrieved 100 of 5,963 RNA–protein pairs in 26.9 ms