RNA–Protein interactions for RNA: YNL054W-B

YNL054W-B, Transcript of TyB Gag-Pol protein, yeastyeast

Gene YNL054W-B, Length 5,250 nt, Biotype pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YNL054W-BYNL054W-B YIL014C-AQ02598 104 aa0.11□□□□□ -2.39
YNL054W-BYNL054W-B SPG4Q04438 115 aa0.11□□□□□ -2.39
YNL054W-BYNL054W-B SHH3Q04487 196 aa0.11□□□□□ -2.39
YNL054W-BYNL054W-B COA4Q05809 96 aa0.11□□□□□ -2.39
YNL054W-BYNL054W-B IRC23Q08416 157 aa0.11□□□□□ -2.39
YNL054W-BYNL054W-B PEX27Q08580 376 aa0.11□□□□□ -2.39
YNL054W-BYNL054W-B PRM3Q08931 133 aa0.11□□□□□ -2.39
YNL054W-BYNL054W-B POC4Q12245 148 aaPredicted RBP0.11□□□□□ -2.39
YNL054W-BYNL054W-B SNU23Q12368 194 aaPredicted RBP0.11□□□□□ -2.39
YNL054W-BYNL054W-B ATG31Q12421 196 aa0.11□□□□□ -2.39
YNL054W-BYNL054W-B RPL21BQ12672 160 aaKnown RBP0.11□□□□□ -2.39
YNL054W-BYNL054W-B SUS1Q6WNK7 96 aa0.11□□□□□ -2.39
YNL054W-BYNL054W-B YHR214C-DP0CX93 97 aa0.11□□□□□ -2.39
YNL054W-BYNL054W-B HAP3P13434 144 aa0.11□□□□□ -2.39
YNL054W-BYNL054W-B SHE2P36068 246 aaKnown RBP RIP-Chip data0.11□□□□□ -2.39not detected
YNL054W-BYNL054W-B ATG8P38182 117 aaRIP-Chip data0.11□□□□□ -2.39not detected
YNL054W-BYNL054W-B DSE2P38844 325 aa0.11□□□□□ -2.39
YNL054W-BYNL054W-B BFR1P38934 470 aaKnown RBP RIP-Chip data0.11□□□□□ -2.39not detected
YNL054W-BYNL054W-B SNF11P38956 169 aa0.11□□□□□ -2.39
YNL054W-BYNL054W-B YNL200CP40165 246 aaKnown RBP0.11□□□□□ -2.39
YNL054W-BYNL054W-B YNL198CP40166 100 aa0.11□□□□□ -2.39
YNL054W-BYNL054W-B PHB1P40961 287 aa0.11□□□□□ -2.39
YNL054W-BYNL054W-B NRK1P53915 240 aa0.11□□□□□ -2.39
YNL054W-BYNL054W-B RAV2Q03956 351 aa0.11□□□□□ -2.39
YNL054W-BYNL054W-B UPS3Q04006 179 aa0.11□□□□□ -2.39
YNL054W-BYNL054W-B GIM5Q04493 163 aa0.11□□□□□ -2.39
YNL054W-BYNL054W-B YMR320WQ04897 101 aa0.11□□□□□ -2.39
YNL054W-BYNL054W-B VTA1Q06263 330 aa0.11□□□□□ -2.39
YNL054W-BYNL054W-B YOR186WQ08560 144 aa0.11□□□□□ -2.39
YNL054W-BYNL054W-B YCL048W-AQ2V2Q2 79 aa0.11□□□□□ -2.39
YNL054W-BYNL054W-B PET494P07390 489 aaPredicted RBP0.11□□□□□ -2.39
YNL054W-BYNL054W-B PAU1P0CE88 120 aa0.11□□□□□ -2.39
YNL054W-BYNL054W-B PAU14P0CE89 120 aa0.11□□□□□ -2.39
YNL054W-BYNL054W-B PAU6P0CE90 120 aa0.11□□□□□ -2.39
YNL054W-BYNL054W-B PAU18P0CE91 120 aa0.11□□□□□ -2.39
YNL054W-BYNL054W-B PAU8P0CE92 120 aa0.11□□□□□ -2.39
YNL054W-BYNL054W-B PAU11P0CE93 120 aa0.11□□□□□ -2.39
YNL054W-BYNL054W-B UPS2P35200 230 aa0.11□□□□□ -2.39
YNL054W-BYNL054W-B LSM2P38203 95 aaKnown RBP0.11□□□□□ -2.39
YNL054W-BYNL054W-B YBR090CP38253 122 aa0.11□□□□□ -2.39
YNL054W-BYNL054W-B PAU13P38725 120 aa0.11□□□□□ -2.39
YNL054W-BYNL054W-B VMA7P39111 118 aa0.11□□□□□ -2.39
YNL054W-BYNL054W-B SLX9P53251 210 aaPredicted RBP0.11□□□□□ -2.39
YNL054W-BYNL054W-B DYN2Q02647 92 aa0.11□□□□□ -2.39
YNL054W-BYNL054W-B CTF19Q02732 369 aa0.11□□□□□ -2.39
YNL054W-BYNL054W-B PAU10Q03050 120 aa0.11□□□□□ -2.39
YNL054W-BYNL054W-B RIM9Q04734 239 aa0.11□□□□□ -2.39
YNL054W-BYNL054W-B PAU20Q08322 120 aa0.11□□□□□ -2.39
YNL054W-BYNL054W-B RPN5Q12250 445 aaKnown RBP0.11□□□□□ -2.39
YNL054W-BYNL054W-B TIM22Q12328 207 aa0.11□□□□□ -2.39
YNL054W-BYNL054W-B PAU9Q3E770 120 aa0.11□□□□□ -2.39
YNL054W-BYNL054W-B CDC31P06704 161 aaKnown RBP0.11□□□□□ -2.39
YNL054W-BYNL054W-B RPL27BP0C2H7 136 aaKnown RBP0.11□□□□□ -2.39
YNL054W-BYNL054W-B RPB3P16370 318 aaKnown RBP0.11□□□□□ -2.39
YNL054W-BYNL054W-B PRE1P22141 198 aaKnown RBP0.11□□□□□ -2.39
YNL054W-BYNL054W-B RPC19P28000 142 aaKnown RBP0.11□□□□□ -2.39
YNL054W-BYNL054W-B YBR016WP38216 128 aa0.11□□□□□ -2.39
YNL054W-BYNL054W-B GDT1P38301 280 aaPredicted RBP0.11□□□□□ -2.39
YNL054W-BYNL054W-B YHL044WP38727 235 aa0.11□□□□□ -2.39
YNL054W-BYNL054W-B SHU1P38751 150 aa0.11□□□□□ -2.39
YNL054W-BYNL054W-B MED6P38782 295 aa0.11□□□□□ -2.39
YNL054W-BYNL054W-B PIR5P46999 287 aa0.11□□□□□ -2.39
YNL054W-BYNL054W-B RSM27P53305 110 aa0.11□□□□□ -2.39
YNL054W-BYNL054W-B SSU72P53538 206 aaPredicted RBP0.11□□□□□ -2.39
YNL054W-BYNL054W-B YPL162CQ12042 273 aa0.11□□□□□ -2.39
YNL054W-BYNL054W-B YGR121W-AQ3E816 71 aa0.11□□□□□ -2.39
YNL054W-BYNL054W-B PCC1Q3E833 88 aa0.11□□□□□ -2.39
YNL054W-BYNL054W-B YMR122W-AQ3E842 84 aa0.11□□□□□ -2.39
YNL054W-BYNL054W-B RPL39P04650 51 aa0.1□□□□□ -2.39
YNL054W-BYNL054W-B SFT2P38166 215 aa0.1□□□□□ -2.39
YNL054W-BYNL054W-B YHR138CP38841 114 aaPredicted RBP0.1□□□□□ -2.39
YNL054W-BYNL054W-B CTR2P38865 189 aa0.1□□□□□ -2.39
YNL054W-BYNL054W-B SVP26P38869 228 aa0.1□□□□□ -2.39
YNL054W-BYNL054W-B VTC1P40046 129 aaRIP-Chip data0.1□□□□□ -2.39not detected
YNL054W-BYNL054W-B VMA21P41806 77 aa0.1□□□□□ -2.39
YNL054W-BYNL054W-B PDR17P53844 350 aa0.1□□□□□ -2.39
YNL054W-BYNL054W-B MET31Q03081 177 aa0.1□□□□□ -2.39
YNL054W-BYNL054W-B YMR090WQ04304 227 aaKnown RBP0.1□□□□□ -2.39
YNL054W-BYNL054W-B ICY1Q04329 127 aa0.1□□□□□ -2.39
YNL054W-BYNL054W-B YLR099W-AQ3E798 87 aa0.1□□□□□ -2.39
YNL054W-BYNL054W-B KIN28P06242 306 aa0.1□□□□□ -2.39
YNL054W-BYNL054W-B SEC4P07560 215 aaKnown RBP0.1□□□□□ -2.39
YNL054W-BYNL054W-B RPL27AP0C2H6 136 aaKnown RBP0.1□□□□□ -2.39
YNL054W-BYNL054W-B RPL16AP26784 199 aaKnown RBP0.1□□□□□ -2.39
YNL054W-BYNL054W-B YKR070WP36151 352 aaKnown RBP0.1□□□□□ -2.39
YNL054W-BYNL054W-B DER1P38307 211 aa0.1□□□□□ -2.39
YNL054W-BYNL054W-B LSM5P40089 93 aaKnown RBP0.1□□□□□ -2.39
YNL054W-BYNL054W-B YMR141CP40211 102 aa0.1□□□□□ -2.39
YNL054W-BYNL054W-B POR2P40478 281 aa0.1□□□□□ -2.39
YNL054W-BYNL054W-B ARC15P40518 154 aaRIP-Chip data0.1□□□□□ -2.39not detected
YNL054W-BYNL054W-B GNA1P43577 159 aaPredicted RBP0.1□□□□□ -2.39
YNL054W-BYNL054W-B CGR1P53188 120 aa0.1□□□□□ -2.39
YNL054W-BYNL054W-B TOM7P53507 60 aa0.1□□□□□ -2.39
YNL054W-BYNL054W-B CAB5Q03941 241 aa0.1□□□□□ -2.39
YNL054W-BYNL054W-B DPP1Q05521 289 aa0.1□□□□□ -2.39
YNL054W-BYNL054W-B RRT7Q07829 113 aa0.1□□□□□ -2.39
YNL054W-BYNL054W-B LDS2Q08218 356 aa0.1□□□□□ -2.39
YNL054W-BYNL054W-B YGL194C-AQ2V2P6 80 aa0.1□□□□□ -2.39
YNL054W-BYNL054W-B YOR020W-AQ3E824 90 aa0.1□□□□□ -2.39
YNL054W-BYNL054W-B RNA14P25298 677 aaKnown RBP0.1□□□□□ -2.39
Retrieved 100 of 5,963 RNA–protein pairs in 7.9 ms