RNA–Protein interactions for RNA: YLL050C

COF1, Transcript of Cofilin, involved in pH-dependent actin filament depolarization, yeast

Gene COF1, Length 432 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
COF1	YLL050C	EMP24	P32803	203 aa	Known RBP	0.74	□□□□□ -2.29
COF1	YLL050C	YHR130C	P38834	111 aa		0.74	□□□□□ -2.29
COF1	YLL050C	YER187W	P40102	141 aa		0.74	□□□□□ -2.29
COF1	YLL050C	VMA21	P41806	77 aa		0.74	□□□□□ -2.29
COF1	YLL050C	SNN1	P48232	102 aa		0.74	□□□□□ -2.29
COF1	YLL050C	YIL014C-A	Q02598	104 aa		0.74	□□□□□ -2.29
COF1	YLL050C	YLR194C	Q05777	254 aa		0.74	□□□□□ -2.29
COF1	YLL050C	SWC7	Q06707	132 aa		0.74	□□□□□ -2.29
COF1	YLL050C	PCC1	Q3E833	88 aa		0.74	□□□□□ -2.29
COF1	YLL050C	YLR365W	Q7LIF2	110 aa		0.74	□□□□□ -2.29
COF1	YLL050C	TSC11	P40061	1430 aa		0.73	□□□□□ -2.29
COF1	YLL050C	YSF3	P0C074	85 aa	Predicted RBP	0.73	□□□□□ -2.29
COF1	YLL050C	RPS22A	P0C0W1	130 aa	Known RBP	0.73	□□□□□ -2.29
COF1	YLL050C	AIM4	P38305	123 aa	Predicted RBP	0.73	□□□□□ -2.29
COF1	YLL050C	HUR1	P45820	110 aa		0.73	□□□□□ -2.29
COF1	YLL050C	PAU12	P53343	120 aa		0.73	□□□□□ -2.29
COF1	YLL050C	RPL22B	P56628	122 aa	Known RBP	0.73	□□□□□ -2.29
COF1	YLL050C	YMR103C	Q04436	120 aa		0.73	□□□□□ -2.29
COF1	YLL050C	OCA6	Q12454	224 aa		0.73	□□□□□ -2.29
COF1	YLL050C	YLR363W-A	Q3E747	85 aa		0.73	□□□□□ -2.29
COF1	YLL050C	RPS22B	Q3E7Y3	130 aa	Known RBP	0.73	□□□□□ -2.29
COF1	YLL050C	COA6	Q3E846	104 aa		0.73	□□□□□ -2.29
COF1	YLL050C	RPL22A	P05749	121 aa	Known RBP	0.72	□□□□□ -2.29
COF1	YLL050C	YOL013W-A	P0C272	63 aa	Predicted RBP	0.72	□□□□□ -2.29
COF1	YLL050C	SRX1	P36077	127 aa		0.72	□□□□□ -2.29
COF1	YLL050C	YBR090C	P38253	122 aa		0.72	□□□□□ -2.29
COF1	YLL050C	YEA6	P39953	335 aa		0.72	□□□□□ -2.29
COF1	YLL050C	CYB5	P40312	120 aa		0.72	□□□□□ -2.29
COF1	YLL050C	YIL163C	P40448	117 aa		0.72	□□□□□ -2.29
COF1	YLL050C	POR2	P40478	281 aa		0.72	□□□□□ -2.29
COF1	YLL050C	MIC27	P50945	234 aa		0.72	□□□□□ -2.29
COF1	YLL050C	MGR2	Q02889	113 aa		0.72	□□□□□ -2.29
COF1	YLL050C	YMR090W	Q04304	227 aa	Known RBP	0.72	□□□□□ -2.29
COF1	YLL050C	LCL2	Q08045	131 aa		0.72	□□□□□ -2.29
COF1	YLL050C	YPL225W	Q08971	146 aa	Known RBP	0.72	□□□□□ -2.29
COF1	YLL050C	FAS1	P07149	2051 aa	Known RBP	0.72	□□□□□ -2.29
COF1	YLL050C	ROM2	P51862	1356 aa	Known RBP	0.71	□□□□□ -2.3
COF1	YLL050C	PAU19	P0CE85	124 aa		0.71	□□□□□ -2.3
COF1	YLL050C	UBC5	P15732	148 aa		0.71	□□□□□ -2.3
COF1	YLL050C	PAU3	P25610	124 aa		0.71	□□□□□ -2.3
COF1	YLL050C	YBR013C	P38215	129 aa		0.71	□□□□□ -2.3
COF1	YLL050C	COX23	P38824	151 aa		0.71	□□□□□ -2.3
COF1	YLL050C	HUA1	P40325	198 aa		0.71	□□□□□ -2.3
COF1	YLL050C	MVB12	P42939	101 aa		0.71	□□□□□ -2.3
COF1	YLL050C	ICS3	P47034	131 aa		0.71	□□□□□ -2.3
COF1	YLL050C	ZEO1	Q08245	113 aa		0.71	□□□□□ -2.3
COF1	YLL050C	YGL041C-B	Q3E750	60 aa		0.71	□□□□□ -2.3
COF1	YLL050C	YOS1	Q3E834	85 aa		0.71	□□□□□ -2.3
COF1	YLL050C	ENV10	Q99382	181 aa		0.71	□□□□□ -2.3
COF1	YLL050C	MRPL31	P14063	131 aa	Predicted RBP	0.7	□□□□□ -2.3
COF1	YLL050C	SRB6	P32570	121 aa		0.7	□□□□□ -2.3
COF1	YLL050C	PAU2	P32612	120 aa		0.7	□□□□□ -2.3
COF1	YLL050C	PAU24	P38155	120 aa		0.7	□□□□□ -2.3
COF1	YLL050C	YIR020C	P40575	100 aa		0.7	□□□□□ -2.3
COF1	YLL050C	FIT3	Q08907	204 aa		0.7	□□□□□ -2.3
COF1	YLL050C	YLR285C-A	Q3E771	56 aa		0.7	□□□□□ -2.3
COF1	YLL050C	YHR213W-B	Q8TGK1	99 aa		0.7	□□□□□ -2.3
COF1	YLL050C	MIC10	Q96VH5	97 aa		0.7	□□□□□ -2.3
COF1	YLL050C	LYS2	P07702	1392 aa		0.7	□□□□□ -2.3
COF1	YLL050C	KRE5	P22023	1365 aa		0.7	□□□□□ -2.3
COF1	YLL050C	UBR1	P19812	1950 aa		0.69	□□□□□ -2.3
COF1	YLL050C	HMRA2	P0CY13	119 aa		0.69	□□□□□ -2.3
COF1	YLL050C	UBC4	P15731	148 aa		0.69	□□□□□ -2.3
COF1	YLL050C	YCR101C	P25607	182 aa		0.69	□□□□□ -2.3
COF1	YLL050C	BUD23	P25627	275 aa	Predicted RBP	0.69	□□□□□ -2.3
COF1	YLL050C	YHR138C	P38841	114 aa	Predicted RBP	0.69	□□□□□ -2.3
COF1	YLL050C	HHY1	P39982	102 aa		0.69	□□□□□ -2.3
COF1	YLL050C	YMR321C	Q04898	105 aa		0.69	□□□□□ -2.3
COF1	YLL050C	YCL048W-A	Q2V2Q2	79 aa		0.69	□□□□□ -2.3
COF1	YLL050C	GEA2	P39993	1459 aa	Known RBP	0.68	□□□□□ -2.3
COF1	YLL050C	PAU16	P35994	123 aa		0.68	□□□□□ -2.3
COF1	YLL050C	PAU15	P40585	124 aa		0.68	□□□□□ -2.3
COF1	YLL050C	VPS55	P47111	140 aa		0.68	□□□□□ -2.3
COF1	YLL050C	RPL37A	P49166	88 aa	Known RBP	0.68	□□□□□ -2.3
COF1	YLL050C	LSM6	Q06406	86 aa	Known RBP	0.68	□□□□□ -2.3
COF1	YLL050C	YGR240C-A	Q3E786	66 aa		0.68	□□□□□ -2.3
COF1	YLL050C	HUG1	Q6Q5K6	68 aa		0.68	□□□□□ -2.3
COF1	YLL050C	YPK9	Q12697	1472 aa		0.67	□□□□□ -2.3
COF1	YLL050C	TOP2	P06786	1428 aa	Known RBP	0.67	□□□□□ -2.3
COF1	YLL050C	PDR11	P40550	1411 aa		0.67	□□□□□ -2.3
COF1	YLL050C	GEA1	P47102	1408 aa	Predicted RBP	0.67	□□□□□ -2.3
COF1	YLL050C	YMR141C	P40211	102 aa		0.67	□□□□□ -2.3
COF1	YLL050C	MIX14	Q04341	121 aa		0.67	□□□□□ -2.3
COF1	YLL050C	YOL118C	Q08259	102 aa		0.67	□□□□□ -2.3
COF1	YLL050C	DNA2	P38859	1522 aa		0.67	□□□□□ -2.3
COF1	YLL050C	ACC1	Q00955	2233 aa	Known RBP	0.66	□□□□□ -2.3
COF1	YLL050C	CAT8	P39113	1433 aa		0.66	□□□□□ -2.3
COF1	YLL050C	BUD4	P47136	1447 aa		0.66	□□□□□ -2.3
COF1	YLL050C	YLR419W	Q06698	1435 aa	Known RBP	0.66	□□□□□ -2.3
COF1	YLL050C	REV3	P14284	1504 aa		0.66	□□□□□ -2.3
COF1	YLL050C	YOR289W	Q12012	251 aa	Predicted RBP	0.66	□□□□□ -2.3
COF1	YLL050C	KSH1	Q8TGJ3	72 aa		0.66	□□□□□ -2.3
COF1	YLL050C	UBR2	Q07963	1872 aa		0.66	□□□□□ -2.3
COF1	YLL050C	CCW14	O13547	238 aa		0.65	□□□□□ -2.31
COF1	YLL050C	YHL005C	P38752	130 aa		0.65	□□□□□ -2.31
COF1	YLL050C	IMP2	P46972	177 aa		0.65	□□□□□ -2.31
COF1	YLL050C	YJR128W	P47162	119 aa		0.65	□□□□□ -2.31
COF1	YLL050C	TY3B-I	Q7LHG5	1498 aa	Known RBP	0.65	□□□□□ -2.31
COF1	YLL050C	EMC5	P40540	141 aa		0.64	□□□□□ -2.31
COF1	YLL050C	MSL1	P40567	111 aa	Predicted RBP	0.64	□□□□□ -2.31

Retrieved 100 of 5,963 RNA–protein pairs in 61.7 ms