RNA–Protein interactions for RNA: YKR081C

RPF2, Transcript of Essential protein involved in rRNA maturation and ribosomal assembly, yeastyeast

Gene RPF2, Length 1,035 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPF2YKR081C TTI2P47168 421 aa1.26□□□□□ -2.21
RPF2YKR081C NMA1Q06178 401 aaKnown RBP1.26□□□□□ -2.21
RPF2YKR081C SHH4Q06236 168 aa1.26□□□□□ -2.21
RPF2YKR081C YPR174CQ06616 221 aaPredicted RBP1.26□□□□□ -2.21
RPF2YKR081C DGA1Q08650 418 aa1.26□□□□□ -2.21
RPF2YKR081C YDR029WQ12111 104 aa1.26□□□□□ -2.21
RPF2YKR081C POC4Q12245 148 aaPredicted RBP1.26□□□□□ -2.21
RPF2YKR081C RPS25AQ3E792 108 aaPredicted RBP1.26□□□□□ -2.21
RPF2YKR081C MHF1Q3E835 90 aa1.26□□□□□ -2.21
RPF2YKR081C KSH1Q8TGJ3 72 aa1.26□□□□□ -2.21
RPF2YKR081C YRF1-1P0CX20 1796 aa1.26□□□□□ -2.21
RPF2YKR081C YRF1-5P0CX21 1796 aa1.26□□□□□ -2.21
RPF2YKR081C YRF1-8P0CX22 1796 aa1.26□□□□□ -2.21
RPF2YKR081C PDR12Q02785 1511 aa1.25□□□□□ -2.21
RPF2YKR081C PDR11P40550 1411 aa1.25□□□□□ -2.21
RPF2YKR081C YRF1-3P0CX14 1859 aa1.25□□□□□ -2.21
RPF2YKR081C YRF1-7P0CX15 1859 aa1.25□□□□□ -2.21
RPF2YKR081C YRF1-6P53819 1859 aa1.25□□□□□ -2.21
RPF2YKR081C PBI2P0CT04 75 aaKnown RBP1.25□□□□□ -2.21
RPF2YKR081C YHL042WP38729 150 aa1.25□□□□□ -2.21
RPF2YKR081C HUA1P40325 198 aa1.25□□□□□ -2.21
RPF2YKR081C RPL37BP51402 88 aaKnown RBP1.25□□□□□ -2.21
RPF2YKR081C EMC4P53073 190 aa1.25□□□□□ -2.21
RPF2YKR081C THG1P53215 237 aaKnown RBP1.25□□□□□ -2.21
RPF2YKR081C PGA1P53896 198 aa1.25□□□□□ -2.21
RPF2YKR081C LSM7P53905 115 aaKnown RBP1.25□□□□□ -2.21
RPF2YKR081C GPI19Q04082 140 aa1.25□□□□□ -2.21
RPF2YKR081C UPS1Q05776 175 aa1.25□□□□□ -2.21
RPF2YKR081C NAT3Q06504 195 aa1.25□□□□□ -2.21
RPF2YKR081C YOR097CQ12274 175 aaPredicted RBP1.25□□□□□ -2.21
RPF2YKR081C VMA9Q3E7B6 73 aa1.25□□□□□ -2.21
RPF2YKR081C MIC10Q96VH5 97 aa1.25□□□□□ -2.21
RPF2YKR081C MED11Q99278 115 aa1.25□□□□□ -2.21
RPF2YKR081C ATP15P21306 62 aa1.24□□□□□ -2.21
RPF2YKR081C YCR050CP25630 102 aa1.24□□□□□ -2.21
RPF2YKR081C MRP17P28778 131 aa1.24□□□□□ -2.21
RPF2YKR081C SRP21P32342 167 aa1.24□□□□□ -2.21
RPF2YKR081C YHR138CP38841 114 aaPredicted RBP1.24□□□□□ -2.21
RPF2YKR081C YER181CP40097 107 aa1.24□□□□□ -2.21
RPF2YKR081C YNL200CP40165 246 aaKnown RBP1.24□□□□□ -2.21
RPF2YKR081C YNL033WP53964 284 aa1.24□□□□□ -2.21
RPF2YKR081C YNL019CP53975 284 aa1.24□□□□□ -2.21
RPF2YKR081C KEI1Q06346 221 aa1.24□□□□□ -2.21
RPF2YKR081C YDR119W-AQ2V2P9 66 aa1.24□□□□□ -2.21
RPF2YKR081C YFR032C-BQ8TGU2 87 aa1.24□□□□□ -2.21
RPF2YKR081C DDP1Q99321 188 aaKnown RBP1.24□□□□□ -2.21
RPF2YKR081C RKR1Q04781 1562 aa1.24□□□□□ -2.21
RPF2YKR081C PDR5P33302 1511 aaKnown RBP1.24□□□□□ -2.21
RPF2YKR081C PDR15Q04182 1529 aaKnown RBP1.24□□□□□ -2.21
RPF2YKR081C GDB1Q06625 1536 aa1.24□□□□□ -2.21
RPF2YKR081C YRF1-2P40105 1681 aa1.23□□□□□ -2.21
RPF2YKR081C ECM12O13529 151 aa1.23□□□□□ -2.21
RPF2YKR081C CKS1P20486 150 aaKnown RBP1.23□□□□□ -2.21
RPF2YKR081C MAK31P23059 88 aa1.23□□□□□ -2.21
RPF2YKR081C YCR085WP25650 117 aa1.23□□□□□ -2.21
RPF2YKR081C YBR032WP38223 100 aa1.23□□□□□ -2.21
RPF2YKR081C NSA2P40078 261 aaKnown RBP1.23□□□□□ -2.21
RPF2YKR081C EMC5P40540 141 aa1.23□□□□□ -2.21
RPF2YKR081C PHS1P40857 217 aa1.23□□□□□ -2.21
RPF2YKR081C GPI2P46961 280 aa1.23□□□□□ -2.21
RPF2YKR081C FYV12Q08559 129 aa1.23□□□□□ -2.21
RPF2YKR081C MPD1Q12404 318 aaKnown RBP1.23□□□□□ -2.21
RPF2YKR081C YLR412C-AQ3E742 68 aa1.23□□□□□ -2.21
RPF2YKR081C KTI11Q3E840 82 aa1.23□□□□□ -2.21
RPF2YKR081C SNQ2P32568 1501 aaKnown RBP1.23□□□□□ -2.21
RPF2YKR081C CHC1P22137 1653 aaKnown RBP1.23□□□□□ -2.21
RPF2YKR081C TOM1Q03280 3268 aa1.22□□□□□ -2.21
RPF2YKR081C POR1P04840 283 aaKnown RBP1.22□□□□□ -2.21
RPF2YKR081C YHR212W-AP0CX91 67 aa1.22□□□□□ -2.21
RPF2YKR081C UBC4P15731 148 aa1.22□□□□□ -2.21
RPF2YKR081C YCR099CP25657 155 aa1.22□□□□□ -2.21
RPF2YKR081C AHT1P29589 182 aa1.22□□□□□ -2.21
RPF2YKR081C FYV4P38783 130 aaPredicted RBP1.22□□□□□ -2.21
RPF2YKR081C YAL064WP39711 94 aa1.22□□□□□ -2.21
RPF2YKR081C CYB5P40312 120 aa1.22□□□□□ -2.21
RPF2YKR081C YFR035CP43608 114 aa1.22□□□□□ -2.21
RPF2YKR081C MPC1P53157 130 aaKnown RBP1.22□□□□□ -2.21
RPF2YKR081C YGR164WP53291 111 aa1.22□□□□□ -2.21
RPF2YKR081C EST3Q03096 181 aa1.22□□□□□ -2.21
RPF2YKR081C FIT1Q04433 528 aa1.22□□□□□ -2.21
RPF2YKR081C RAF1Q06891 181 aa1.22□□□□□ -2.21
RPF2YKR081C PAU23Q07987 124 aa1.22□□□□□ -2.21
RPF2YKR081C YDL157CQ12082 118 aa1.22□□□□□ -2.21
RPF2YKR081C PAU17Q12370 124 aa1.22□□□□□ -2.21
RPF2YKR081C YMR175W-AQ3E766 64 aa1.22□□□□□ -2.21
RPF2YKR081C VTH1P40438 1549 aa1.21□□□□□ -2.22
RPF2YKR081C VTH2P40890 1549 aa1.21□□□□□ -2.22
RPF2YKR081C NUM1Q00402 2748 aa1.21□□□□□ -2.22
RPF2YKR081C SPO14P36126 1683 aa1.21□□□□□ -2.22
RPF2YKR081C MLP2P40457 1679 aa1.21□□□□□ -2.22
RPF2YKR081C MDM35O60200 86 aa1.21□□□□□ -2.22
RPF2YKR081C DDR48P18899 430 aaKnown RBP1.21□□□□□ -2.22
RPF2YKR081C HSP12P22943 109 aaKnown RBP1.21□□□□□ -2.22
RPF2YKR081C SFT2P38166 215 aa1.21□□□□□ -2.22
RPF2YKR081C ATX1P38636 73 aa1.21□□□□□ -2.22
RPF2YKR081C SWM2P40342 146 aa1.21□□□□□ -2.22
RPF2YKR081C MSL1P40567 111 aaPredicted RBP1.21□□□□□ -2.22
RPF2YKR081C YFL019CP43576 117 aa1.21□□□□□ -2.22
RPF2YKR081C YGL193CP53097 103 aa1.21□□□□□ -2.22
RPF2YKR081C YNR064CP53750 290 aa1.21□□□□□ -2.22
Retrieved 100 of 5,963 RNA–protein pairs in 33.7 ms