RNA–Protein interactions for RNA: YKR056W

TRM2, Transcript of tRNA methyltransferase, yeastyeast

Gene TRM2, Length 1,920 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRM2YKR056W YHR213WP0CI67 198 aa1.47□□□□□ -2.17
TRM2YKR056W HYP2P23301 157 aaKnown RBP1.47□□□□□ -2.17
TRM2YKR056W YER187WP40102 141 aa1.47□□□□□ -2.17
TRM2YKR056W YGR164WP53291 111 aa1.46□□□□□ -2.18
TRM2YKR056W IGO1P53897 168 aa1.46□□□□□ -2.18
TRM2YKR056W PCC1Q3E833 88 aa1.46□□□□□ -2.18
TRM2YKR056W RPL36BO14455 100 aaKnown RBP1.46□□□□□ -2.18
TRM2YKR056W RPL33AP05744 107 aaKnown RBP1.46□□□□□ -2.18
TRM2YKR056W RPL36AP05745 100 aaPredicted RBP1.46□□□□□ -2.18
TRM2YKR056W COX23P38824 151 aa1.46□□□□□ -2.18
TRM2YKR056W LST8P41318 303 aa1.46□□□□□ -2.18
TRM2YKR056W PRM3Q08931 133 aa1.46□□□□□ -2.18
TRM2YKR056W YHL037CP38733 133 aa1.45□□□□□ -2.18
TRM2YKR056W YIR020CP40575 100 aa1.45□□□□□ -2.18
TRM2YKR056W SED1Q01589 338 aa1.45□□□□□ -2.18
TRM2YKR056W FIT1Q04433 528 aa1.45□□□□□ -2.18
TRM2YKR056W OST5Q92316 86 aa1.45□□□□□ -2.18
TRM2YKR056W PAU19P0CE85 124 aa1.44□□□□□ -2.18
TRM2YKR056W PAU3P25610 124 aa1.44□□□□□ -2.18
TRM2YKR056W MRPL15P36523 253 aa1.44□□□□□ -2.18
TRM2YKR056W YMR122CQ03879 124 aa1.44□□□□□ -2.18
TRM2YKR056W HPA2Q06592 156 aa1.44□□□□□ -2.18
TRM2YKR056W DAD1Q12248 94 aa1.44□□□□□ -2.18
TRM2YKR056W LYS2P07702 1392 aa1.44□□□□□ -2.18
TRM2YKR056W SKI3P17883 1432 aaKnown RBP1.44□□□□□ -2.18
TRM2YKR056W TRM732Q03496 1420 aa1.44□□□□□ -2.18
TRM2YKR056W UBC4P15731 148 aa1.44□□□□□ -2.18
TRM2YKR056W SNN1P48232 102 aa1.44□□□□□ -2.18
TRM2YKR056W BEM2P39960 2167 aaKnown RBP1.43□□□□□ -2.18
TRM2YKR056W YHR212W-AP0CX91 67 aa1.43□□□□□ -2.18
TRM2YKR056W GTT1P40582 234 aa1.43□□□□□ -2.18
TRM2YKR056W YMR090WQ04304 227 aaKnown RBP1.43□□□□□ -2.18
TRM2YKR056W COA4Q05809 96 aa1.43□□□□□ -2.18
TRM2YKR056W YLR285C-AQ3E771 56 aa1.43□□□□□ -2.18
TRM2YKR056W KSH1Q8TGJ3 72 aa1.43□□□□□ -2.18
TRM2YKR056W YJL197C-AP0C5P0 93 aa1.42□□□□□ -2.18
TRM2YKR056W HMRA2P0CY13 119 aa1.42□□□□□ -2.18
TRM2YKR056W SRX1P36077 127 aa1.42□□□□□ -2.18
TRM2YKR056W HUR1P45820 110 aa1.42□□□□□ -2.18
TRM2YKR056W RPL22BP56628 122 aaKnown RBP1.42□□□□□ -2.18
TRM2YKR056W HFA1P32874 2273 aa1.41□□□□□ -2.18
TRM2YKR056W UBR2Q07963 1872 aa1.41□□□□□ -2.18
TRM2YKR056W YSF3P0C074 85 aaPredicted RBP1.41□□□□□ -2.18
TRM2YKR056W CYB5P40312 120 aa1.41□□□□□ -2.18
TRM2YKR056W YIL163CP40448 117 aa1.41□□□□□ -2.18
TRM2YKR056W YCR075W-AQ3E830 75 aa1.41□□□□□ -2.18
TRM2YKR056W YOS1Q3E834 85 aa1.41□□□□□ -2.18
TRM2YKR056W PDR11P40550 1411 aa1.4□□□□□ -2.18
TRM2YKR056W PAU16P35994 123 aa1.4□□□□□ -2.18
TRM2YKR056W PAU15P40585 124 aa1.4□□□□□ -2.18
TRM2YKR056W RRT15Q3E811 62 aa1.4□□□□□ -2.18
TRM2YKR056W YRF1-3P0CX14 1859 aa1.4□□□□□ -2.19
TRM2YKR056W YRF1-7P0CX15 1859 aa1.4□□□□□ -2.19
TRM2YKR056W YRF1-6P53819 1859 aa1.4□□□□□ -2.19
TRM2YKR056W BNI1P41832 1953 aa1.4□□□□□ -2.19
TRM2YKR056W RSM19P53733 91 aaPredicted RBP1.4□□□□□ -2.19
TRM2YKR056W SCP1Q08873 200 aa1.4□□□□□ -2.19
TRM2YKR056W PFY1P07274 126 aa1.39□□□□□ -2.19
TRM2YKR056W YGL194C-AQ2V2P6 80 aa1.39□□□□□ -2.19
TRM2YKR056W POR2P40478 281 aa1.38□□□□□ -2.19
TRM2YKR056W FIT3Q08907 204 aa1.38□□□□□ -2.19
TRM2YKR056W COA6Q3E846 104 aa1.38□□□□□ -2.19
TRM2YKR056W RPL22AP05749 121 aaKnown RBP1.38□□□□□ -2.19
TRM2YKR056W LAA1P39526 2014 aa1.38□□□□□ -2.19
TRM2YKR056W CCW12Q12127 133 aa1.37□□□□□ -2.19
TRM2YKR056W VMA21P41806 77 aa1.36□□□□□ -2.19
TRM2YKR056W PAU5P43575 122 aa1.36□□□□□ -2.19
TRM2YKR056W MIC27P50945 234 aa1.36□□□□□ -2.19
TRM2YKR056W SLH1P53327 1967 aaKnown RBP1.36□□□□□ -2.19
TRM2YKR056W YBR013CP38215 129 aa1.36□□□□□ -2.19
TRM2YKR056W SWC7Q06707 132 aa1.36□□□□□ -2.19
TRM2YKR056W SSN2P38931 1420 aa1.36□□□□□ -2.19
TRM2YKR056W GEA2P39993 1459 aaKnown RBP1.35□□□□□ -2.19
TRM2YKR056W EMC5P40540 141 aa1.35□□□□□ -2.19
TRM2YKR056W YDR029WQ12111 104 aa1.35□□□□□ -2.19
TRM2YKR056W YLR363W-AQ3E747 85 aa1.35□□□□□ -2.19
TRM2YKR056W ENV10Q99382 181 aa1.35□□□□□ -2.19
TRM2YKR056W TY3B-IQ7LHG5 1498 aaKnown RBP1.35□□□□□ -2.19
TRM2YKR056W GEA1P47102 1408 aaPredicted RBP1.35□□□□□ -2.19
TRM2YKR056W RPS22AP0C0W1 130 aaKnown RBP1.34□□□□□ -2.19
TRM2YKR056W DNA2P38859 1522 aa1.34□□□□□ -2.19
TRM2YKR056W HMRA1P0CY11 126 aa1.34□□□□□ -2.2
TRM2YKR056W MSL1P40567 111 aaPredicted RBP1.34□□□□□ -2.2
TRM2YKR056W MRPS12P53732 153 aa1.34□□□□□ -2.2
TRM2YKR056W MIX14Q04341 121 aa1.34□□□□□ -2.2
TRM2YKR056W LSM6Q06406 86 aaKnown RBP1.34□□□□□ -2.2
TRM2YKR056W MYO1P08964 1928 aa1.33□□□□□ -2.2
TRM2YKR056W YOL013W-AP0C272 63 aaPredicted RBP1.33□□□□□ -2.2
TRM2YKR056W SNU13P39990 126 aaKnown RBP1.33□□□□□ -2.2
TRM2YKR056W YNL122CP53921 115 aaPredicted RBP1.33□□□□□ -2.2
TRM2YKR056W CAT8P39113 1433 aa1.33□□□□□ -2.2
TRM2YKR056W YCR001WP25347 104 aa1.32□□□□□ -2.2
TRM2YKR056W IRC21Q04772 201 aa1.32□□□□□ -2.2
TRM2YKR056W RSF2P46974 1380 aa1.31□□□□□ -2.2
TRM2YKR056W TY4B-JP47024 1803 aa1.31□□□□□ -2.2
TRM2YKR056W REV3P14284 1504 aa1.31□□□□□ -2.2
TRM2YKR056W YLR419WQ06698 1435 aaKnown RBP1.31□□□□□ -2.2
TRM2YKR056W ROM2P51862 1356 aaKnown RBP1.31□□□□□ -2.2
TRM2YKR056W VPS55P47111 140 aa1.3□□□□□ -2.2
TRM2YKR056W YKL068W-AQ3E826 78 aa1.3□□□□□ -2.2
Retrieved 100 of 5,963 RNA–protein pairs in 22.1 ms