RNA–Protein interactions for RNA: YGR143W

SKN1, Transcript of Protein involved in sphingolipid biosynthesis, yeastyeast

Gene SKN1, Length 2,316 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SKN1YGR143W YPL038W-AQ3E7B4 63 aa4.83□□□□□ -1.64
SKN1YGR143W RRT15Q3E811 62 aa4.83□□□□□ -1.64
SKN1YGR143W YCR006CP25350 157 aa4.83□□□□□ -1.64
SKN1YGR143W YCR025CP25352 136 aa4.83□□□□□ -1.64
SKN1YGR143W MTC7P32633 139 aa4.83□□□□□ -1.64
SKN1YGR143W RRT13P40042 185 aa4.83□□□□□ -1.64
SKN1YGR143W GAT4P40569 121 aa4.83□□□□□ -1.64
SKN1YGR143W COX12Q01519 83 aa4.83□□□□□ -1.64
SKN1YGR143W SHH4Q06236 168 aa4.83□□□□□ -1.64
SKN1YGR143W YDL007C-AQ2V2Q0 85 aa4.83□□□□□ -1.64
SKN1YGR143W BET1P22804 142 aa4.82□□□□□ -1.64
SKN1YGR143W YGL118CP53132 145 aa4.82□□□□□ -1.64
SKN1YGR143W FHN1P53279 174 aa4.82□□□□□ -1.64
SKN1YGR143W CSL4P53859 292 aaPredicted RBP4.82□□□□□ -1.64
SKN1YGR143W MCH4Q08268 501 aa4.82□□□□□ -1.64
SKN1YGR143W TIM18Q08749 192 aa4.82□□□□□ -1.64
SKN1YGR143W YHR139C-AO13536 103 aa4.81□□□□□ -1.64
SKN1YGR143W COX9P07255 59 aa4.81□□□□□ -1.64
SKN1YGR143W AHT1P29589 182 aa4.81□□□□□ -1.64
SKN1YGR143W CSH1P38287 376 aa4.81□□□□□ -1.64
SKN1YGR143W YIL014C-AQ02598 104 aa4.81□□□□□ -1.64
SKN1YGR143W FZF1P32805 299 aa4.81□□□□□ -1.64
SKN1YGR143W OST1P41543 476 aaKnown RBP4.81□□□□□ -1.64
SKN1YGR143W FIP1P45976 327 aa4.81□□□□□ -1.64
SKN1YGR143W TDA4P47153 279 aa4.81□□□□□ -1.64
SKN1YGR143W MIM1Q08176 113 aa4.81□□□□□ -1.64
SKN1YGR143W COA2Q3E823 68 aa4.81□□□□□ -1.64
SKN1YGR143W RPP1P38786 293 aa4.8□□□□□ -1.64
SKN1YGR143W SKI6P46948 246 aaPredicted RBP4.8□□□□□ -1.64
SKN1YGR143W SMT3Q12306 101 aaKnown RBP4.8□□□□□ -1.64
SKN1YGR143W AQY1P0CD91 305 aa4.8□□□□□ -1.64
SKN1YGR143W YER181CP40097 107 aa4.8□□□□□ -1.64
SKN1YGR143W PET191Q02772 108 aa4.8□□□□□ -1.64
SKN1YGR143W NIP7Q08962 181 aaKnown RBP4.8□□□□□ -1.64
SKN1YGR143W YOR376W-AQ3E805 51 aa4.8□□□□□ -1.64
SKN1YGR143W MIC10Q96VH5 97 aa4.8□□□□□ -1.64
SKN1YGR143W MDM35O60200 86 aa4.79□□□□□ -1.64
SKN1YGR143W QRI5P32344 111 aa4.79□□□□□ -1.64
SKN1YGR143W SFT2P38166 215 aa4.79□□□□□ -1.64
SKN1YGR143W YIL029CP40538 142 aa4.79□□□□□ -1.64
SKN1YGR143W TOS8P53147 276 aa4.79□□□□□ -1.64
SKN1YGR143W YNL046WP53956 172 aa4.79□□□□□ -1.64
SKN1YGR143W YPR011CQ12251 326 aa4.79□□□□□ -1.64
SKN1YGR143W YMR316C-AI2HB70 103 aa4.79□□□□□ -1.64
SKN1YGR143W GGC1P38988 300 aa4.79□□□□□ -1.64
SKN1YGR143W BRP1P53194 125 aa4.79□□□□□ -1.64
SKN1YGR143W YNL234WP53857 426 aa4.79□□□□□ -1.64
SKN1YGR143W RLM1Q12224 676 aa4.79□□□□□ -1.64
SKN1YGR143W EMC6Q12431 108 aa4.79□□□□□ -1.64
SKN1YGR143W SMD1Q02260 146 aaPredicted RBP4.78□□□□□ -1.64
SKN1YGR143W ECM15P35195 104 aa4.78□□□□□ -1.64
SKN1YGR143W UBC9P50623 157 aaPredicted RBP4.78□□□□□ -1.64
SKN1YGR143W RRS1Q08746 203 aaKnown RBP4.78□□□□□ -1.64
SKN1YGR143W AIR2Q12476 344 aaKnown RBP4.78□□□□□ -1.64
SKN1YGR143W YDR381C-AQ3E6R5 114 aa4.78□□□□□ -1.64
SKN1YGR143W MRPL31P14063 131 aaPredicted RBP4.77□□□□□ -1.65
SKN1YGR143W YFL019CP43576 117 aa4.77□□□□□ -1.65
SKN1YGR143W YGL034CP53186 121 aa4.77□□□□□ -1.65
SKN1YGR143W CRH1P53301 507 aa4.77□□□□□ -1.65
SKN1YGR143W HAL1Q01766 294 aa4.77□□□□□ -1.65
SKN1YGR143W PBP4Q07362 185 aaKnown RBP4.77□□□□□ -1.65
SKN1YGR143W RPS22AP0C0W1 130 aaKnown RBP4.77□□□□□ -1.65
SKN1YGR143W MXR2P25566 168 aa4.77□□□□□ -1.65
SKN1YGR143W SPT4P32914 102 aaPredicted RBP4.77□□□□□ -1.65
SKN1YGR143W PIR5P46999 287 aa4.77□□□□□ -1.65
SKN1YGR143W TRS23Q03784 219 aa4.77□□□□□ -1.65
SKN1YGR143W MET32Q12041 191 aa4.77□□□□□ -1.65
SKN1YGR143W CUZ1P53899 274 aa4.76□□□□□ -1.65
SKN1YGR143W LSM6Q06406 86 aaKnown RBP4.76□□□□□ -1.65
SKN1YGR143W YBR056W-AI2HB52 66 aa4.75□□□□□ -1.65
SKN1YGR143W Q0255P03881 472 aa4.75□□□□□ -1.65
SKN1YGR143W PIS1P06197 220 aaKnown RBP4.75□□□□□ -1.65
SKN1YGR143W RPL16AP26784 199 aaKnown RBP4.75□□□□□ -1.65
SKN1YGR143W FPR2P32472 135 aa4.75□□□□□ -1.65
SKN1YGR143W DSE2P38844 325 aa4.75□□□□□ -1.65
SKN1YGR143W FUN19P28003 413 aaPredicted RBP4.75□□□□□ -1.65
SKN1YGR143W YKL044WP36092 106 aa4.75□□□□□ -1.65
SKN1YGR143W SWD3P38123 315 aa4.75□□□□□ -1.65
SKN1YGR143W YIL163CP40448 117 aa4.75□□□□□ -1.65
SKN1YGR143W GCN1P33892 2672 aaKnown RBP4.75□□□□□ -1.65
SKN1YGR143W YIL086CP40503 102 aa4.74□□□□□ -1.65
SKN1YGR143W YOR186WQ08560 144 aa4.74□□□□□ -1.65
SKN1YGR143W IMP1P28627 190 aa4.74□□□□□ -1.65
SKN1YGR143W TIM12P32830 109 aa4.74□□□□□ -1.65
SKN1YGR143W PEX17P40155 199 aa4.74□□□□□ -1.65
SKN1YGR143W YOR268CQ08734 132 aa4.74□□□□□ -1.65
SKN1YGR143W TRA1P38811 3744 aa4.74□□□□□ -1.65
SKN1YGR143W YBR255C-AQ3E776 120 aa4.73□□□□□ -1.65
SKN1YGR143W RPL42AP0CX27 106 aaKnown RBP4.73□□□□□ -1.65
SKN1YGR143W RPL42BP0CX28 106 aaKnown RBP4.73□□□□□ -1.65
SKN1YGR143W YER187WP40102 141 aa4.73□□□□□ -1.65
SKN1YGR143W RSM19P53733 91 aaPredicted RBP4.73□□□□□ -1.65
SKN1YGR143W YNL217WP40152 326 aa4.72□□□□□ -1.65
SKN1YGR143W YPL261CQ08976 102 aa4.72□□□□□ -1.65
SKN1YGR143W YHR213WP0CI67 198 aa4.72□□□□□ -1.65
SKN1YGR143W RPL16BP26785 198 aaKnown RBP4.72□□□□□ -1.65
SKN1YGR143W KEG1P43614 200 aa4.72□□□□□ -1.65
SKN1YGR143W SUT1P53032 299 aaKnown RBP4.72□□□□□ -1.65
SKN1YGR143W YDR102CQ03864 110 aa4.72□□□□□ -1.65
SKN1YGR143W YPL278CQ08990 100 aa4.72□□□□□ -1.65
Retrieved 100 of 5,963 RNA–protein pairs in 13.6 ms