RNA–Protein interactions for RNA: YGL011C

SCL1, Transcript of Alpha 1 subunit of the 20S proteasome, yeastyeast

Gene SCL1, Length 759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SCL1YGL011C YOR015WQ12169 119 aa1.9□□□□□ -2.11
SCL1YGL011C YCR075W-AQ3E830 75 aa1.9□□□□□ -2.11
SCL1YGL011C COA6Q3E846 104 aa1.9□□□□□ -2.11
SCL1YGL011C RPS28BP0C0X0 67 aaKnown RBP1.89□□□□□ -2.11
SCL1YGL011C MRPL24P36525 258 aaPredicted RBP1.89□□□□□ -2.11
SCL1YGL011C MOB1P40484 314 aa1.89□□□□□ -2.11
SCL1YGL011C SBH2P52871 88 aa1.89□□□□□ -2.11
SCL1YGL011C HHT1P61830 136 aa1.89□□□□□ -2.11
SCL1YGL011C GRX5Q02784 150 aa1.89□□□□□ -2.11
SCL1YGL011C GPI11Q06636 219 aa1.89□□□□□ -2.11
SCL1YGL011C YLR050CQ12155 161 aaKnown RBP1.89□□□□□ -2.11
SCL1YGL011C RDI1Q12434 202 aa1.89□□□□□ -2.11
SCL1YGL011C VMA9Q3E7B6 73 aa1.89□□□□□ -2.11
SCL1YGL011C RPS28AQ3E7X9 67 aaPredicted RBP1.89□□□□□ -2.11
SCL1YGL011C IML1P47170 1584 aa1.89□□□□□ -2.11
SCL1YGL011C FKS3Q04952 1785 aa1.88□□□□□ -2.11
SCL1YGL011C MYO1P08964 1928 aa1.88□□□□□ -2.11
SCL1YGL011C YRF1-2P40105 1681 aa1.88□□□□□ -2.11
SCL1YGL011C CSH1P38287 376 aa1.88□□□□□ -2.11
SCL1YGL011C YEA6P39953 335 aa1.88□□□□□ -2.11
SCL1YGL011C MPM1P40364 252 aa1.88□□□□□ -2.11
SCL1YGL011C YGL235WP53071 178 aa1.88□□□□□ -2.11
SCL1YGL011C YOL131WQ08270 108 aa1.88□□□□□ -2.11
SCL1YGL011C NAT5Q08689 176 aa1.88□□□□□ -2.11
SCL1YGL011C YPR145C-AQ2V2P0 78 aa1.88□□□□□ -2.11
SCL1YGL011C COA3Q3E7B2 85 aa1.88□□□□□ -2.11
SCL1YGL011C YOS1Q3E834 85 aa1.88□□□□□ -2.11
SCL1YGL011C MHF1Q3E835 90 aa1.88□□□□□ -2.11
SCL1YGL011C YNR034W-AQ3E841 98 aa1.88□□□□□ -2.11
SCL1YGL011C SUS1Q6WNK7 96 aa1.88□□□□□ -2.11
SCL1YGL011C RIB3Q99258 208 aa1.88□□□□□ -2.11
SCL1YGL011C RPL22AP05749 121 aaKnown RBP1.87□□□□□ -2.11
SCL1YGL011C RPS25BP0C0T4 108 aaKnown RBP1.87□□□□□ -2.11
SCL1YGL011C EMP24P32803 203 aaKnown RBP1.87□□□□□ -2.11
SCL1YGL011C TRS20P38334 175 aa1.87□□□□□ -2.11
SCL1YGL011C VMR1P38735 1592 aa1.87□□□□□ -2.11
SCL1YGL011C IPT1P38954 527 aa1.87□□□□□ -2.11
SCL1YGL011C GSC2P40989 1895 aa1.87□□□□□ -2.11
SCL1YGL011C YMR320WQ04897 101 aa1.87□□□□□ -2.11
SCL1YGL011C YDR278CQ05612 105 aa1.87□□□□□ -2.11
SCL1YGL011C HUT1Q12520 339 aa1.87□□□□□ -2.11
SCL1YGL011C RPS25AQ3E792 108 aaPredicted RBP1.87□□□□□ -2.11
SCL1YGL011C YOR381W-AQ3E804 55 aa1.87□□□□□ -2.11
SCL1YGL011C BCK1Q01389 1478 aa1.87□□□□□ -2.11
SCL1YGL011C BNI1P41832 1953 aa1.87□□□□□ -2.11
SCL1YGL011C RAD6P06104 172 aa1.86□□□□□ -2.11
SCL1YGL011C PBI2P0CT04 75 aaKnown RBP1.86□□□□□ -2.11
SCL1YGL011C HYP2P23301 157 aaKnown RBP1.86□□□□□ -2.11
SCL1YGL011C BUB2P26448 306 aaPredicted RBP1.86□□□□□ -2.11
SCL1YGL011C RPL14BP38754 138 aaKnown RBP1.86□□□□□ -2.11
SCL1YGL011C YJR015WP47090 510 aa1.86□□□□□ -2.11
SCL1YGL011C YNL019CP53975 284 aa1.86□□□□□ -2.11
SCL1YGL011C RAV2Q03956 351 aa1.86□□□□□ -2.11
SCL1YGL011C THI74Q04083 370 aa1.86□□□□□ -2.11
SCL1YGL011C YHP1Q04116 353 aa1.86□□□□□ -2.11
SCL1YGL011C RIM9Q04734 239 aa1.86□□□□□ -2.11
SCL1YGL011C ATG41Q12048 136 aa1.86□□□□□ -2.11
SCL1YGL011C NUP192P47054 1683 aa1.86□□□□□ -2.11
SCL1YGL011C BUD3P25558 1636 aa1.85□□□□□ -2.11
SCL1YGL011C HMRA1P0CY11 126 aa1.85□□□□□ -2.11
SCL1YGL011C PEX34P25584 144 aa1.85□□□□□ -2.11
SCL1YGL011C ATX1P38636 73 aa1.85□□□□□ -2.11
SCL1YGL011C CWP2P43497 92 aa1.85□□□□□ -2.11
SCL1YGL011C YGR039WP53225 103 aa1.85□□□□□ -2.11
SCL1YGL011C RPL22BP56628 122 aaKnown RBP1.85□□□□□ -2.11
SCL1YGL011C HSK3P69852 69 aa1.85□□□□□ -2.11
SCL1YGL011C FIT1Q04433 528 aa1.85□□□□□ -2.11
SCL1YGL011C ELP6Q04868 273 aa1.85□□□□□ -2.11
SCL1YGL011C YPR114WQ06107 315 aa1.85□□□□□ -2.11
SCL1YGL011C YLR042CQ07990 161 aa1.85□□□□□ -2.11
SCL1YGL011C YPR203WQ08994 102 aa1.85□□□□□ -2.11
SCL1YGL011C SLH1P53327 1967 aaKnown RBP1.85□□□□□ -2.11
SCL1YGL011C YER039C-AP0CD97 72 aa1.84□□□□□ -2.11
SCL1YGL011C UBI4P0CG63 381 aaKnown RBP1.84□□□□□ -2.11
SCL1YGL011C MRP17P28778 131 aa1.84□□□□□ -2.11
SCL1YGL011C SLM6P38343 150 aa1.84□□□□□ -2.11
SCL1YGL011C RPS20P38701 121 aaKnown RBP1.84□□□□□ -2.11
SCL1YGL011C GCV3P39726 170 aaPredicted RBP1.84□□□□□ -2.11
SCL1YGL011C EMC5P40540 141 aa1.84□□□□□ -2.11
SCL1YGL011C MET31Q03081 177 aa1.84□□□□□ -2.11
SCL1YGL011C PAU23Q07987 124 aa1.84□□□□□ -2.11
SCL1YGL011C YLR118CQ12354 227 aa1.84□□□□□ -2.11
SCL1YGL011C PAU17Q12370 124 aa1.84□□□□□ -2.11
SCL1YGL011C TAR1Q8TGM6 124 aa1.84□□□□□ -2.11
SCL1YGL011C RIM15P43565 1770 aa1.84□□□□□ -2.12
SCL1YGL011C RPB11P38902 120 aa1.83□□□□□ -2.12
SCL1YGL011C DLS1P40366 167 aa1.83□□□□□ -2.12
SCL1YGL011C PAU15P40585 124 aa1.83□□□□□ -2.12
SCL1YGL011C PAM16P42949 149 aa1.83□□□□□ -2.12
SCL1YGL011C COF1Q03048 143 aaKnown RBP1.83□□□□□ -2.12
SCL1YGL011C AVO2Q04749 426 aa1.83□□□□□ -2.12
SCL1YGL011C SWC7Q06707 132 aa1.83□□□□□ -2.12
SCL1YGL011C FMP49A0A023PZB3 126 aa1.82□□□□□ -2.12
SCL1YGL011C RPL40AP0CH08 128 aaKnown RBP1.82□□□□□ -2.12
SCL1YGL011C RPL40BP0CH09 128 aaKnown RBP1.82□□□□□ -2.12
SCL1YGL011C SHB17P36136 271 aaKnown RBP1.82□□□□□ -2.12
SCL1YGL011C YHR138CP38841 114 aaPredicted RBP1.82□□□□□ -2.12
SCL1YGL011C MSL1P40567 111 aaPredicted RBP1.82□□□□□ -2.12
SCL1YGL011C AIM11P87275 137 aa1.82□□□□□ -2.12
SCL1YGL011C YDR029WQ12111 104 aa1.82□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 57.2 ms