RNA–Protein interactions for RNA: YFR002W

NIC96, Transcript of Linker nucleoporin component of the nuclear pore complex (NPC), yeastyeast

Gene NIC96, Length 2,520 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NIC96YFR002W YLR099W-AQ3E798 87 aa1.35□□□□□ -2.19
NIC96YFR002W URA2P07259 2214 aaKnown RBP1.35□□□□□ -2.19
NIC96YFR002W RPL22AP05749 121 aaKnown RBP1.34□□□□□ -2.19
NIC96YFR002W INO4P13902 151 aa1.34□□□□□ -2.19
NIC96YFR002W YCR101CP25607 182 aa1.34□□□□□ -2.19
NIC96YFR002W SFT1P43682 97 aa1.34□□□□□ -2.19
NIC96YFR002W DAD4P69851 72 aa1.34□□□□□ -2.19
NIC96YFR002W PRP11Q07350 266 aaPredicted RBP1.34□□□□□ -2.19
NIC96YFR002W ATG41Q12048 136 aa1.34□□□□□ -2.19
NIC96YFR002W FCY1Q12178 158 aa1.34□□□□□ -2.19
NIC96YFR002W YNL277W-AQ3E7Z0 62 aa1.34□□□□□ -2.19
NIC96YFR002W SLH1P53327 1967 aaKnown RBP1.34□□□□□ -2.19
NIC96YFR002W MPM1P40364 252 aa1.34□□□□□ -2.2
NIC96YFR002W GEP7P53171 287 aa1.34□□□□□ -2.2
NIC96YFR002W RUB1Q03919 77 aa1.34□□□□□ -2.2
NIC96YFR002W UPS3Q04006 179 aa1.34□□□□□ -2.2
NIC96YFR002W YHP1Q04116 353 aa1.34□□□□□ -2.2
NIC96YFR002W SDH7Q04401 133 aa1.34□□□□□ -2.2
NIC96YFR002W COX8P04039 78 aa1.33□□□□□ -2.2
NIC96YFR002W ADK1P07170 222 aaKnown RBP1.33□□□□□ -2.2
NIC96YFR002W NMT1P14743 455 aa1.33□□□□□ -2.2
NIC96YFR002W YKR045CP36138 183 aa1.33□□□□□ -2.2
NIC96YFR002W YEL067CP39978 195 aa1.33□□□□□ -2.2
NIC96YFR002W YIR020CP40575 100 aa1.33□□□□□ -2.2
NIC96YFR002W SAY1P53324 424 aa1.33□□□□□ -2.2
NIC96YFR002W SML1Q04964 104 aa1.33□□□□□ -2.2
NIC96YFR002W FIT2Q08906 153 aa1.33□□□□□ -2.2
NIC96YFR002W MDH2P22133 377 aa1.33□□□□□ -2.2
NIC96YFR002W GSP2P32836 220 aaKnown RBP1.33□□□□□ -2.2
NIC96YFR002W VMA7P39111 118 aa1.33□□□□□ -2.2
NIC96YFR002W DAN1P47178 298 aa1.33□□□□□ -2.2
NIC96YFR002W YGR017WP53210 297 aa1.33□□□□□ -2.2
NIC96YFR002W TVP18Q04767 167 aa1.33□□□□□ -2.2
NIC96YFR002W YPR174CQ06616 221 aaPredicted RBP1.33□□□□□ -2.2
NIC96YFR002W SCS22Q6Q595 175 aa1.33□□□□□ -2.2
NIC96YFR002W KIN28P06242 306 aa1.32□□□□□ -2.2
NIC96YFR002W GPA2P10823 449 aa1.32□□□□□ -2.2
NIC96YFR002W TFC1P32367 649 aa1.32□□□□□ -2.2
NIC96YFR002W UTP11P34247 250 aaPredicted RBP1.32□□□□□ -2.2
NIC96YFR002W BOL1Q3E793 110 aa1.32□□□□□ -2.2
NIC96YFR002W YFR035CP43608 114 aa1.32□□□□□ -2.2
NIC96YFR002W ERG25P53045 309 aa1.32□□□□□ -2.2
NIC96YFR002W ELC1Q03071 99 aa1.32□□□□□ -2.2
NIC96YFR002W RRT7Q07829 113 aa1.32□□□□□ -2.2
NIC96YFR002W CYR1P08678 2026 aaKnown RBP1.31□□□□□ -2.2
NIC96YFR002W DSE2P38844 325 aa1.31□□□□□ -2.2
NIC96YFR002W CCS1P40202 249 aaKnown RBP1.31□□□□□ -2.2
NIC96YFR002W TMA23Q03525 211 aa1.31□□□□□ -2.2
NIC96YFR002W UIP4Q08926 304 aa1.31□□□□□ -2.2
NIC96YFR002W YOR289WQ12012 251 aaPredicted RBP1.31□□□□□ -2.2
NIC96YFR002W YLR118CQ12354 227 aa1.31□□□□□ -2.2
NIC96YFR002W YOR304C-AO14468 76 aa1.31□□□□□ -2.2
NIC96YFR002W SPS2P08459 502 aa1.31□□□□□ -2.2
NIC96YFR002W YHR214C-DP0CX93 97 aa1.31□□□□□ -2.2
NIC96YFR002W YCR050CP25630 102 aa1.31□□□□□ -2.2
NIC96YFR002W YGR269WP40326 108 aa1.31□□□□□ -2.2
NIC96YFR002W ARL3Q02804 198 aa1.31□□□□□ -2.2
NIC96YFR002W ELP6Q04868 273 aa1.31□□□□□ -2.2
NIC96YFR002W STF2P16965 84 aa1.3□□□□□ -2.2
NIC96YFR002W RPS27AP35997 82 aaKnown RBP1.3□□□□□ -2.2
NIC96YFR002W RPS27BP38711 82 aa1.3□□□□□ -2.2
NIC96YFR002W YHL042WP38729 150 aa1.3□□□□□ -2.2
NIC96YFR002W YAL064WP39711 94 aa1.3□□□□□ -2.2
NIC96YFR002W PHS1P40857 217 aa1.3□□□□□ -2.2
NIC96YFR002W APS2Q00381 147 aa1.3□□□□□ -2.2
NIC96YFR002W IRC19Q07843 230 aa1.3□□□□□ -2.2
NIC96YFR002W YKL068W-AQ3E826 78 aa1.3□□□□□ -2.2
NIC96YFR002W COX5BP00425 151 aa1.3□□□□□ -2.2
NIC96YFR002W BUD23P25627 275 aaPredicted RBP1.3□□□□□ -2.2
NIC96YFR002W YBL010CP32788 280 aa1.3□□□□□ -2.2
NIC96YFR002W GSP1P32835 219 aaKnown RBP1.3□□□□□ -2.2
NIC96YFR002W YCL001W-AP87012 153 aa1.3□□□□□ -2.2
NIC96YFR002W YML079WQ03629 201 aa1.3□□□□□ -2.2
NIC96YFR002W YOR385WQ08909 290 aa1.3□□□□□ -2.2
NIC96YFR002W YPL225WQ08971 146 aaKnown RBP1.3□□□□□ -2.2
NIC96YFR002W ROX3P25046 220 aa1.29□□□□□ -2.2
NIC96YFR002W AIM18P38884 321 aa1.29□□□□□ -2.2
NIC96YFR002W GAT4P40569 121 aa1.29□□□□□ -2.2
NIC96YFR002W GRX5Q02784 150 aa1.29□□□□□ -2.2
NIC96YFR002W YIR021W-AQ3E739 70 aa1.29□□□□□ -2.2
NIC96YFR002W YOR376W-AQ3E805 51 aa1.29□□□□□ -2.2
NIC96YFR002W TMA19P35691 167 aaKnown RBP1.29□□□□□ -2.2
NIC96YFR002W RGI1P40043 161 aaPredicted RBP1.29□□□□□ -2.2
NIC96YFR002W FLX1P40464 311 aa1.29□□□□□ -2.2
NIC96YFR002W AIM11P87275 137 aa1.29□□□□□ -2.2
NIC96YFR002W SAE3P89114 91 aa1.29□□□□□ -2.2
NIC96YFR002W RAF1Q06891 181 aa1.29□□□□□ -2.2
NIC96YFR002W YHR086W-AQ3E746 53 aa1.29□□□□□ -2.2
NIC96YFR002W YCL001W-BQ96VH2 84 aa1.29□□□□□ -2.2
NIC96YFR002W DDP1Q99321 188 aaKnown RBP1.29□□□□□ -2.2
NIC96YFR002W SWC7Q06707 132 aa1.28□□□□□ -2.2
NIC96YFR002W CMC4Q3E7A9 73 aa1.28□□□□□ -2.2
NIC96YFR002W MHF1Q3E835 90 aa1.28□□□□□ -2.2
NIC96YFR002W FYV5P25585 152 aa1.28□□□□□ -2.2
NIC96YFR002W LSM8P47093 109 aaKnown RBP1.28□□□□□ -2.2
NIC96YFR002W AIM36Q03798 255 aa1.28□□□□□ -2.2
NIC96YFR002W AVO2Q04749 426 aa1.28□□□□□ -2.2
NIC96YFR002W YMR252CQ04814 134 aa1.28□□□□□ -2.2
NIC96YFR002W NMA1Q06178 401 aaKnown RBP1.28□□□□□ -2.2
NIC96YFR002W YSF3P0C074 85 aaPredicted RBP1.27□□□□□ -2.21
Retrieved 100 of 5,963 RNA–protein pairs in 24.5 ms