RNA–Protein interactions for RNA: YFL002C

SPB4, Transcript of Putative ATP-dependent RNA helicase, yeastyeast

Gene SPB4, Length 1,821 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPB4YFL002C YEA6P39953 335 aa2.17□□□□□ -2.06
SPB4YFL002C YER187WP40102 141 aa2.17□□□□□ -2.06
SPB4YFL002C YLR194CQ05777 254 aa2.17□□□□□ -2.06
SPB4YFL002C ZEO1Q08245 113 aa2.17□□□□□ -2.06
SPB4YFL002C ACC1Q00955 2233 aaKnown RBP2.17□□□□□ -2.06
SPB4YFL002C DAD1Q12248 94 aa2.17□□□□□ -2.06
SPB4YFL002C OST5Q92316 86 aa2.17□□□□□ -2.06
SPB4YFL002C PRM3Q08931 133 aa2.16□□□□□ -2.06
SPB4YFL002C TOP2P06786 1428 aaKnown RBP2.16□□□□□ -2.06
SPB4YFL002C COA4Q05809 96 aa2.15□□□□□ -2.06
SPB4YFL002C UBC5P15732 148 aa2.14□□□□□ -2.07
SPB4YFL002C YOR289WQ12012 251 aaPredicted RBP2.14□□□□□ -2.07
SPB4YFL002C PCC1Q3E833 88 aa2.14□□□□□ -2.07
SPB4YFL002C YJL197C-AP0C5P0 93 aa2.14□□□□□ -2.07
SPB4YFL002C AIM4P38305 123 aaPredicted RBP2.14□□□□□ -2.07
SPB4YFL002C GTT1P40582 234 aa2.14□□□□□ -2.07
SPB4YFL002C BUD4P47136 1447 aa2.14□□□□□ -2.07
SPB4YFL002C PAU2P32612 120 aa2.13□□□□□ -2.07
SPB4YFL002C RPL22BP56628 122 aaKnown RBP2.13□□□□□ -2.07
SPB4YFL002C SNN1P48232 102 aa2.12□□□□□ -2.07
SPB4YFL002C IRC21Q04772 201 aa2.12□□□□□ -2.07
SPB4YFL002C KRE5P22023 1365 aa2.12□□□□□ -2.07
SPB4YFL002C BUD23P25627 275 aaPredicted RBP2.12□□□□□ -2.07
SPB4YFL002C PAU24P38155 120 aa2.12□□□□□ -2.07
SPB4YFL002C HUR1P45820 110 aa2.12□□□□□ -2.07
SPB4YFL002C COX23P38824 151 aa2.11□□□□□ -2.07
SPB4YFL002C YMR090WQ04304 227 aaKnown RBP2.11□□□□□ -2.07
SPB4YFL002C SWC7Q06707 132 aa2.11□□□□□ -2.07
SPB4YFL002C UBR2Q07963 1872 aa2.1□□□□□ -2.07
SPB4YFL002C YSF3P0C074 85 aaPredicted RBP2.1□□□□□ -2.07
SPB4YFL002C SRX1P36077 127 aa2.1□□□□□ -2.07
SPB4YFL002C MIC10Q96VH5 97 aa2.1□□□□□ -2.07
SPB4YFL002C VMA21P41806 77 aa2.1□□□□□ -2.07
SPB4YFL002C LYS2P07702 1392 aa2.09□□□□□ -2.07
SPB4YFL002C PAU19P0CE85 124 aa2.09□□□□□ -2.08
SPB4YFL002C PAU3P25610 124 aa2.09□□□□□ -2.08
SPB4YFL002C YIR020CP40575 100 aa2.09□□□□□ -2.08
SPB4YFL002C YOS1Q3E834 85 aa2.09□□□□□ -2.08
SPB4YFL002C UBC4P15731 148 aa2.08□□□□□ -2.08
SPB4YFL002C YIL163CP40448 117 aa2.08□□□□□ -2.08
SPB4YFL002C RPL22AP05749 121 aaKnown RBP2.07□□□□□ -2.08
SPB4YFL002C POR2P40478 281 aa2.07□□□□□ -2.08
SPB4YFL002C YNL122CP53921 115 aaPredicted RBP2.07□□□□□ -2.08
SPB4YFL002C YAR064WP39563 99 aa2.07□□□□□ -2.08
SPB4YFL002C CYB5P40312 120 aa2.07□□□□□ -2.08
SPB4YFL002C YLR285C-AQ3E771 56 aa2.07□□□□□ -2.08
SPB4YFL002C CCW12Q12127 133 aa2.06□□□□□ -2.08
SPB4YFL002C YLR363W-AQ3E747 85 aa2.06□□□□□ -2.08
SPB4YFL002C COA6Q3E846 104 aa2.06□□□□□ -2.08
SPB4YFL002C PDR11P40550 1411 aa2.06□□□□□ -2.08
SPB4YFL002C YCL001W-BQ96VH2 84 aa2.05□□□□□ -2.08
SPB4YFL002C HMRA2P0CY13 119 aa2.05□□□□□ -2.08
SPB4YFL002C YJL009WP47078 108 aa2.05□□□□□ -2.08
SPB4YFL002C SKI3P17883 1432 aaKnown RBP2.04□□□□□ -2.08
SPB4YFL002C GSC2P40989 1895 aa2.04□□□□□ -2.08
SPB4YFL002C YCR001WP25347 104 aa2.04□□□□□ -2.08
SPB4YFL002C MIC27P50945 234 aa2.04□□□□□ -2.08
SPB4YFL002C TY1B-HO13535 1793 aa2.04□□□□□ -2.08
SPB4YFL002C KSH1Q8TGJ3 72 aa2.03□□□□□ -2.08
SPB4YFL002C GEA2P39993 1459 aaKnown RBP2.03□□□□□ -2.08
SPB4YFL002C PAU16P35994 123 aa2.03□□□□□ -2.09
SPB4YFL002C PAU15P40585 124 aa2.03□□□□□ -2.09
SPB4YFL002C GEA1P47102 1408 aaPredicted RBP2.03□□□□□ -2.09
SPB4YFL002C BEM2P39960 2167 aaKnown RBP2.02□□□□□ -2.09
SPB4YFL002C YOL013W-AP0C272 63 aaPredicted RBP2.02□□□□□ -2.09
SPB4YFL002C YBR013CP38215 129 aa2.02□□□□□ -2.09
SPB4YFL002C YOR072WQ08486 104 aa2.02□□□□□ -2.09
SPB4YFL002C ENV10Q99382 181 aa2.02□□□□□ -2.09
SPB4YFL002C YMR007WQ03675 126 aa2.01□□□□□ -2.09
SPB4YFL002C RPS22AP0C0W1 130 aaKnown RBP2□□□□□ -2.09
SPB4YFL002C YIL102CP40488 101 aa2□□□□□ -2.09
SPB4YFL002C FIT3Q08907 204 aa2□□□□□ -2.09
SPB4YFL002C RPS22BQ3E7Y3 130 aaKnown RBP2□□□□□ -2.09
SPB4YFL002C ROM2P51862 1356 aaKnown RBP2□□□□□ -2.09
SPB4YFL002C TY3B-IQ7LHG5 1498 aaKnown RBP1.99□□□□□ -2.09
SPB4YFL002C DNA2P38859 1522 aa1.99□□□□□ -2.09
SPB4YFL002C MIX14Q04341 121 aa1.99□□□□□ -2.09
SPB4YFL002C CAT8P39113 1433 aa1.99□□□□□ -2.09
SPB4YFL002C MGR2Q02889 113 aa1.98□□□□□ -2.09
SPB4YFL002C LCL2Q08045 131 aa1.98□□□□□ -2.09
SPB4YFL002C YGL041C-BQ3E750 60 aa1.98□□□□□ -2.09
SPB4YFL002C SRB6P32570 121 aa1.98□□□□□ -2.09
SPB4YFL002C RSM19P53733 91 aaPredicted RBP1.98□□□□□ -2.09
SPB4YFL002C LSM6Q06406 86 aaKnown RBP1.98□□□□□ -2.09
SPB4YFL002C REV3P14284 1504 aa1.97□□□□□ -2.09
SPB4YFL002C YHR138CP38841 114 aaPredicted RBP1.97□□□□□ -2.09
SPB4YFL002C ICS3P47034 131 aa1.97□□□□□ -2.09
SPB4YFL002C YMR321CQ04898 105 aa1.97□□□□□ -2.09
SPB4YFL002C YLR419WQ06698 1435 aaKnown RBP1.96□□□□□ -2.1
SPB4YFL002C HUA1P40325 198 aa1.96□□□□□ -2.1
SPB4YFL002C MRPL31P14063 131 aaPredicted RBP1.95□□□□□ -2.1
SPB4YFL002C YCL048W-AQ2V2Q2 79 aa1.95□□□□□ -2.1
SPB4YFL002C YGR240C-AQ3E786 66 aa1.95□□□□□ -2.1
SPB4YFL002C YCR075W-AQ3E830 75 aa1.95□□□□□ -2.1
SPB4YFL002C MVB12P42939 101 aa1.94□□□□□ -2.1
SPB4YFL002C VPS55P47111 140 aa1.94□□□□□ -2.1
SPB4YFL002C EMC5P40540 141 aa1.94□□□□□ -2.1
SPB4YFL002C MSL1P40567 111 aaPredicted RBP1.93□□□□□ -2.1
SPB4YFL002C TY4B-JP47024 1803 aa1.92□□□□□ -2.1
SPB4YFL002C HMRA1P0CY11 126 aa1.92□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 66.3 ms