RNA–Protein interactions for RNA: YEL051W

VMA8, Transcript of Subunit D of the V1 peripheral membrane domain of V-ATPase, yeastyeast

Gene VMA8, Length 771 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMA8YEL051W MIC10Q96VH5 97 aa2.33□□□□□ -2.04
VMA8YEL051W ATG40Q99325 256 aa2.33□□□□□ -2.04
VMA8YEL051W RPB9P27999 122 aa2.32□□□□□ -2.04
VMA8YEL051W FYV4P38783 130 aaPredicted RBP2.32□□□□□ -2.04
VMA8YEL051W GCV3P39726 170 aaPredicted RBP2.32□□□□□ -2.04
VMA8YEL051W YGL262WP53054 175 aa2.32□□□□□ -2.04
VMA8YEL051W GRX5Q02784 150 aa2.32□□□□□ -2.04
VMA8YEL051W ELP6Q04868 273 aa2.32□□□□□ -2.04
VMA8YEL051W SYM1Q06563 197 aa2.32□□□□□ -2.04
VMA8YEL051W YLR363W-AQ3E747 85 aa2.32□□□□□ -2.04
VMA8YEL051W YOR376W-AQ3E805 51 aa2.32□□□□□ -2.04
VMA8YEL051W TY4B-HP0C2J7 1802 aa2.32□□□□□ -2.04
VMA8YEL051W YOR093CQ12275 1648 aa2.31□□□□□ -2.04
VMA8YEL051W YHR139C-AO13536 103 aa2.31□□□□□ -2.04
VMA8YEL051W BET1P22804 142 aa2.31□□□□□ -2.04
VMA8YEL051W PAU16P35994 123 aa2.31□□□□□ -2.04
VMA8YEL051W YKR045CP36138 183 aa2.31□□□□□ -2.04
VMA8YEL051W HUR1P45820 110 aa2.31□□□□□ -2.04
VMA8YEL051W SKI6P46948 246 aaPredicted RBP2.31□□□□□ -2.04
VMA8YEL051W MIC27P50945 234 aa2.31□□□□□ -2.04
VMA8YEL051W RPL21AQ02753 160 aaKnown RBP2.31□□□□□ -2.04
VMA8YEL051W LPP1Q04396 274 aa2.31□□□□□ -2.04
VMA8YEL051W SPG3Q04398 127 aaPredicted RBP2.31□□□□□ -2.04
VMA8YEL051W YLR296WQ05898 108 aa2.31□□□□□ -2.04
VMA8YEL051W YPL278CQ08990 100 aa2.31□□□□□ -2.04
VMA8YEL051W YPR011CQ12251 326 aa2.31□□□□□ -2.04
VMA8YEL051W YAL063C-AQ3E791 96 aa2.31□□□□□ -2.04
VMA8YEL051W YPL038W-AQ3E7B4 63 aa2.31□□□□□ -2.04
VMA8YEL051W ODC2Q99297 307 aa2.31□□□□□ -2.04
VMA8YEL051W YHR213WP0CI67 198 aa2.3□□□□□ -2.04
VMA8YEL051W IMP1P28627 190 aa2.3□□□□□ -2.04
VMA8YEL051W YBR292CP38357 123 aa2.3□□□□□ -2.04
VMA8YEL051W YAR068WP39564 161 aa2.3□□□□□ -2.04
VMA8YEL051W YEL028WP39989 153 aa2.3□□□□□ -2.04
VMA8YEL051W YFL019CP43576 117 aa2.3□□□□□ -2.04
VMA8YEL051W YML079WQ03629 201 aa2.3□□□□□ -2.04
VMA8YEL051W YHP1Q04116 353 aa2.3□□□□□ -2.04
VMA8YEL051W NIP7Q08962 181 aaKnown RBP2.3□□□□□ -2.04
VMA8YEL051W EMC6Q12431 108 aa2.3□□□□□ -2.04
VMA8YEL051W YKL023C-AQ2V2P3 75 aa2.3□□□□□ -2.04
VMA8YEL051W DNF2Q12675 1612 aa2.3□□□□□ -2.04
VMA8YEL051W RPA190P10964 1664 aaKnown RBP2.3□□□□□ -2.04
VMA8YEL051W SEC7P11075 2009 aaKnown RBP2.3□□□□□ -2.04
VMA8YEL051W PDR15Q04182 1529 aaKnown RBP2.29□□□□□ -2.04
VMA8YEL051W RPL40AP0CH08 128 aaKnown RBP2.29□□□□□ -2.04
VMA8YEL051W RPL40BP0CH09 128 aaKnown RBP2.29□□□□□ -2.04
VMA8YEL051W GPX1P36014 167 aa2.29□□□□□ -2.04
VMA8YEL051W MRPL27P36526 146 aaPredicted RBP2.29□□□□□ -2.04
VMA8YEL051W YHL042WP38729 150 aa2.29□□□□□ -2.04
VMA8YEL051W YHL005CP38752 130 aa2.29□□□□□ -2.04
VMA8YEL051W HSP10P38910 106 aa2.29□□□□□ -2.04
VMA8YEL051W ASP1P38986 381 aaPredicted RBP2.29□□□□□ -2.04
VMA8YEL051W YER135CP40082 130 aa2.29□□□□□ -2.04
VMA8YEL051W RPL22BP56628 122 aaKnown RBP2.29□□□□□ -2.04
VMA8YEL051W EMI1Q04406 187 aa2.29□□□□□ -2.04
VMA8YEL051W YOR015WQ12169 119 aa2.29□□□□□ -2.04
VMA8YEL051W DAD1Q12248 94 aa2.29□□□□□ -2.04
VMA8YEL051W YOR020W-AQ3E824 90 aa2.29□□□□□ -2.04
VMA8YEL051W URA5P13298 226 aaKnown RBP2.28□□□□□ -2.04
VMA8YEL051W DDR48P18899 430 aaKnown RBP2.28□□□□□ -2.04
VMA8YEL051W NHP2P32495 156 aaPredicted RBP2.28□□□□□ -2.04
VMA8YEL051W MRPS9P38120 278 aa2.28□□□□□ -2.04
VMA8YEL051W UMP1P38293 148 aa2.28□□□□□ -2.04
VMA8YEL051W YAL064WP39711 94 aa2.28□□□□□ -2.04
VMA8YEL051W PAU5P43575 122 aa2.28□□□□□ -2.04
VMA8YEL051W RIM9Q04734 239 aa2.28□□□□□ -2.04
VMA8YEL051W ATG41Q12048 136 aa2.28□□□□□ -2.04
VMA8YEL051W RRT15Q3E811 62 aa2.28□□□□□ -2.04
VMA8YEL051W MYO1P08964 1928 aa2.27□□□□□ -2.05
VMA8YEL051W DUR1,2P32528 1835 aaKnown RBP2.27□□□□□ -2.05
VMA8YEL051W TY4B-JP47024 1803 aa2.27□□□□□ -2.05
VMA8YEL051W YKL044WP36092 106 aa2.27□□□□□ -2.05
VMA8YEL051W RSM18P40033 138 aa2.27□□□□□ -2.05
VMA8YEL051W RRT13P40042 185 aa2.27□□□□□ -2.05
VMA8YEL051W TDA2P40045 126 aa2.27□□□□□ -2.05
VMA8YEL051W YNR064CP53750 290 aa2.27□□□□□ -2.05
VMA8YEL051W MIM1Q08176 113 aa2.27□□□□□ -2.05
VMA8YEL051W FYV12Q08559 129 aa2.27□□□□□ -2.05
VMA8YEL051W YDR381C-AQ3E6R5 114 aa2.27□□□□□ -2.05
VMA8YEL051W YBT1P32386 1661 aa2.27□□□□□ -2.05
VMA8YEL051W IML1P47170 1584 aa2.27□□□□□ -2.05
VMA8YEL051W YLR156WP0CE96 114 aa2.26□□□□□ -2.05
VMA8YEL051W YLR159WP0CE97 114 aa2.26□□□□□ -2.05
VMA8YEL051W YLR161WP0CE98 114 aa2.26□□□□□ -2.05
VMA8YEL051W SEC11P15367 167 aa2.26□□□□□ -2.05
VMA8YEL051W YCR025CP25352 136 aa2.26□□□□□ -2.05
VMA8YEL051W FYV5P25585 152 aa2.26□□□□□ -2.05
VMA8YEL051W ERG2P32352 222 aa2.26□□□□□ -2.05
VMA8YEL051W MSA2P36157 363 aa2.26□□□□□ -2.05
VMA8YEL051W VTC1P40046 129 aaRIP-Chip data2.26□□□□□ -2.05not detected
VMA8YEL051W YNL200CP40165 246 aaKnown RBP2.26□□□□□ -2.05
VMA8YEL051W ATP19P81451 68 aa2.26□□□□□ -2.05
VMA8YEL051W MZM1Q03429 123 aaPredicted RBP2.26□□□□□ -2.05
VMA8YEL051W ICY1Q04329 127 aa2.26□□□□□ -2.05
VMA8YEL051W API2Q04413 109 aa2.26□□□□□ -2.05
VMA8YEL051W SCS22Q6Q595 175 aa2.26□□□□□ -2.05
VMA8YEL051W VMR1P38735 1592 aa2.26□□□□□ -2.05
VMA8YEL051W ECM29P38737 1868 aa2.26□□□□□ -2.05
VMA8YEL051W NUP188P52593 1655 aaKnown RBP2.25□□□□□ -2.05
VMA8YEL051W YAR023CD6VPM8 179 aa2.25□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 29.1 ms