RNA–Protein interactions for RNA: YDL212W

SHR3, Transcript of Endoplasmic reticulum packaging chaperone, yeastyeast

Gene SHR3, Length 633 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHR3YDL212W TRM732Q03496 1420 aa1.21□□□□□ -2.22
SHR3YDL212W RPL40AP0CH08 128 aaKnown RBP1.2□□□□□ -2.22
SHR3YDL212W RPL40BP0CH09 128 aaKnown RBP1.2□□□□□ -2.22
SHR3YDL212W YER187WP40102 141 aa1.2□□□□□ -2.22
SHR3YDL212W LST8P41318 303 aa1.2□□□□□ -2.22
SHR3YDL212W SWC7Q06707 132 aa1.2□□□□□ -2.22
SHR3YDL212W YPL261CQ08976 102 aa1.2□□□□□ -2.22
SHR3YDL212W SKI3P17883 1432 aaKnown RBP1.2□□□□□ -2.22
SHR3YDL212W CDC39P25655 2108 aaKnown RBP1.19□□□□□ -2.22
SHR3YDL212W RPL33AP05744 107 aaKnown RBP1.19□□□□□ -2.22
SHR3YDL212W PFY1P07274 126 aa1.19□□□□□ -2.22
SHR3YDL212W YER188C-AP0C0V2 99 aa1.19□□□□□ -2.22
SHR3YDL212W YGL014C-AP0C5N1 53 aa1.19□□□□□ -2.22
SHR3YDL212W YHR130CP38834 111 aa1.19□□□□□ -2.22
SHR3YDL212W GTT1P40582 234 aa1.19□□□□□ -2.22
SHR3YDL212W HUR1P45820 110 aa1.19□□□□□ -2.22
SHR3YDL212W PAU12P53343 120 aa1.19□□□□□ -2.22
SHR3YDL212W YMR090WQ04304 227 aaKnown RBP1.19□□□□□ -2.22
SHR3YDL212W OST5Q92316 86 aa1.19□□□□□ -2.22
SHR3YDL212W YCL001W-BQ96VH2 84 aa1.19□□□□□ -2.22
SHR3YDL212W UBC4P15731 148 aa1.18□□□□□ -2.22
SHR3YDL212W YIR020CP40575 100 aa1.18□□□□□ -2.22
SHR3YDL212W RPL37BP51402 88 aaKnown RBP1.18□□□□□ -2.22
SHR3YDL212W YIL014C-AQ02598 104 aa1.18□□□□□ -2.22
SHR3YDL212W YMR122CQ03879 124 aa1.18□□□□□ -2.22
SHR3YDL212W YLR194CQ05777 254 aa1.18□□□□□ -2.22
SHR3YDL212W DAD1Q12248 94 aa1.18□□□□□ -2.22
SHR3YDL212W YOS1Q3E834 85 aa1.18□□□□□ -2.22
SHR3YDL212W MIC10Q96VH5 97 aa1.18□□□□□ -2.22
SHR3YDL212W LYS2P07702 1392 aa1.18□□□□□ -2.22
SHR3YDL212W RIF1P29539 1916 aa1.17□□□□□ -2.22
SHR3YDL212W GEA1P47102 1408 aaPredicted RBP1.17□□□□□ -2.22
SHR3YDL212W TY1B-HO13535 1793 aa1.17□□□□□ -2.22
SHR3YDL212W ATG8P38182 117 aaRIP-Chip data1.17□□□□□ -2.22not detected
SHR3YDL212W RPL22BP56628 122 aaKnown RBP1.17□□□□□ -2.22
SHR3YDL212W CCW12Q12127 133 aa1.17□□□□□ -2.22
SHR3YDL212W GEA2P39993 1459 aaKnown RBP1.17□□□□□ -2.22
SHR3YDL212W PDR11P40550 1411 aa1.16□□□□□ -2.22
SHR3YDL212W PAU2P32612 120 aa1.16□□□□□ -2.22
SHR3YDL212W YAR064WP39563 99 aa1.16□□□□□ -2.22
SHR3YDL212W VMA21P41806 77 aa1.16□□□□□ -2.22
SHR3YDL212W COA4Q05809 96 aa1.16□□□□□ -2.22
SHR3YDL212W HPA2Q06592 156 aa1.16□□□□□ -2.22
SHR3YDL212W PCC1Q3E833 88 aa1.16□□□□□ -2.22
SHR3YDL212W KSH1Q8TGJ3 72 aa1.16□□□□□ -2.22
SHR3YDL212W PAU24P38155 120 aa1.15□□□□□ -2.23
SHR3YDL212W COX23P38824 151 aa1.15□□□□□ -2.23
SHR3YDL212W POR2P40478 281 aa1.15□□□□□ -2.23
SHR3YDL212W SNN1P48232 102 aa1.15□□□□□ -2.23
SHR3YDL212W SEN15Q04675 128 aa1.15□□□□□ -2.23
SHR3YDL212W PRM3Q08931 133 aa1.15□□□□□ -2.23
SHR3YDL212W TY3B-IQ7LHG5 1498 aaKnown RBP1.15□□□□□ -2.23
SHR3YDL212W YSF3P0C074 85 aaPredicted RBP1.14□□□□□ -2.23
SHR3YDL212W PAU19P0CE85 124 aa1.14□□□□□ -2.23
SHR3YDL212W PAU3P25610 124 aa1.14□□□□□ -2.23
SHR3YDL212W SRX1P36077 127 aa1.14□□□□□ -2.23
SHR3YDL212W YNL122CP53921 115 aaPredicted RBP1.14□□□□□ -2.23
SHR3YDL212W MIX14Q04341 121 aa1.14□□□□□ -2.23
SHR3YDL212W IRC21Q04772 201 aa1.14□□□□□ -2.23
SHR3YDL212W COA6Q3E846 104 aa1.14□□□□□ -2.23
SHR3YDL212W CAT8P39113 1433 aa1.14□□□□□ -2.23
SHR3YDL212W AIM4P38305 123 aaPredicted RBP1.13□□□□□ -2.23
SHR3YDL212W REV3P14284 1504 aa1.13□□□□□ -2.23
SHR3YDL212W NUM1Q00402 2748 aa1.13□□□□□ -2.23
SHR3YDL212W SSN2P38931 1420 aa1.13□□□□□ -2.23
SHR3YDL212W RPL22AP05749 121 aaKnown RBP1.12□□□□□ -2.23
SHR3YDL212W YIL163CP40448 117 aa1.12□□□□□ -2.23
SHR3YDL212W YIL102CP40488 101 aa1.12□□□□□ -2.23
SHR3YDL212W YJL009WP47078 108 aa1.12□□□□□ -2.23
SHR3YDL212W YLR363W-AQ3E747 85 aa1.12□□□□□ -2.23
SHR3YDL212W YCR075W-AQ3E830 75 aa1.12□□□□□ -2.23
SHR3YDL212W FIT3Q08907 204 aa1.11□□□□□ -2.23
SHR3YDL212W YLR419WQ06698 1435 aaKnown RBP1.1□□□□□ -2.23
SHR3YDL212W PAU16P35994 123 aa1.1□□□□□ -2.23
SHR3YDL212W PAU15P40585 124 aa1.1□□□□□ -2.23
SHR3YDL212W ICS3P47034 131 aa1.1□□□□□ -2.23
SHR3YDL212W YLR285C-AQ3E771 56 aa1.1□□□□□ -2.23
SHR3YDL212W GSC2P40989 1895 aa1.09□□□□□ -2.23
SHR3YDL212W YCR001WP25347 104 aa1.09□□□□□ -2.23
SHR3YDL212W YHL005CP38752 130 aa1.09□□□□□ -2.23
SHR3YDL212W CYB5P40312 120 aa1.09□□□□□ -2.23
SHR3YDL212W RSM19P53733 91 aaPredicted RBP1.09□□□□□ -2.23
SHR3YDL212W YMR321CQ04898 105 aa1.09□□□□□ -2.23
SHR3YDL212W YCL048W-AQ2V2Q2 79 aa1.09□□□□□ -2.23
SHR3YDL212W YOL013W-AP0C272 63 aaPredicted RBP1.08□□□□□ -2.24
SHR3YDL212W HMRA2P0CY13 119 aa1.08□□□□□ -2.24
SHR3YDL212W YHR138CP38841 114 aaPredicted RBP1.08□□□□□ -2.24
SHR3YDL212W YOR072WQ08486 104 aa1.08□□□□□ -2.24
SHR3YDL212W ROM2P51862 1356 aaKnown RBP1.08□□□□□ -2.24
SHR3YDL212W BNI1P41832 1953 aa1.07□□□□□ -2.24
SHR3YDL212W HMRA1P0CY11 126 aa1.07□□□□□ -2.24
SHR3YDL212W YBR013CP38215 129 aa1.07□□□□□ -2.24
SHR3YDL212W EMC5P40540 141 aa1.07□□□□□ -2.24
SHR3YDL212W MSL1P40567 111 aaPredicted RBP1.07□□□□□ -2.24
SHR3YDL212W VPS55P47111 140 aa1.07□□□□□ -2.24
SHR3YDL212W MIC27P50945 234 aa1.07□□□□□ -2.24
SHR3YDL212W MGR2Q02889 113 aa1.07□□□□□ -2.24
SHR3YDL212W YMR082CQ04276 118 aa1.07□□□□□ -2.24
SHR3YDL212W LSM6Q06406 86 aaKnown RBP1.07□□□□□ -2.24
SHR3YDL212W YGL041C-BQ3E750 60 aa1.07□□□□□ -2.24
Retrieved 100 of 5,963 RNA–protein pairs in 47.2 ms