RNA–Protein interactions for RNA: YDL064W

UBC9, Transcript of SUMO-conjugating enzyme involved in the Smt3p conjugation pathway, yeastyeast

Gene UBC9, Length 474 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBC9YDL064W UTP11P34247 250 aaPredicted RBP0.76□□□□□ -2.29
UBC9YDL064W HPM1P40481 377 aa0.76□□□□□ -2.29
UBC9YDL064W TY1B-DR3Q99231 1755 aa0.75□□□□□ -2.29
UBC9YDL064W SPO14P36126 1683 aa0.75□□□□□ -2.29
UBC9YDL064W ULS1Q08562 1619 aa0.75□□□□□ -2.29
UBC9YDL064W NUP170P38181 1502 aa0.75□□□□□ -2.29
UBC9YDL064W SCC2Q04002 1493 aa0.75□□□□□ -2.29
UBC9YDL064W YPK9Q12697 1472 aa0.75□□□□□ -2.29
UBC9YDL064W RPL43AP0CX25 92 aaKnown RBP0.75□□□□□ -2.29
UBC9YDL064W RPL43BP0CX26 92 aa0.75□□□□□ -2.29
UBC9YDL064W YCR050CP25630 102 aa0.75□□□□□ -2.29
UBC9YDL064W MVB12P42939 101 aa0.75□□□□□ -2.29
UBC9YDL064W EMC4P53073 190 aa0.75□□□□□ -2.29
UBC9YDL064W YGL149WP53116 101 aa0.75□□□□□ -2.29
UBC9YDL064W FIT3Q08907 204 aa0.75□□□□□ -2.29
UBC9YDL064W YLR307C-AQ3E825 87 aa0.75□□□□□ -2.29
UBC9YDL064W TOM1Q03280 3268 aa0.75□□□□□ -2.29
UBC9YDL064W TY1B-JR2P47100 1755 aaKnown RBP0.75□□□□□ -2.29
UBC9YDL064W TY1B-ER2Q03619 1755 aa0.75□□□□□ -2.29
UBC9YDL064W TY1B-MR1Q04214 1755 aa0.75□□□□□ -2.29
UBC9YDL064W TY1B-MR2Q04670 1755 aaKnown RBP0.75□□□□□ -2.29
UBC9YDL064W TY1B-LR1Q12088 1755 aaKnown RBP0.75□□□□□ -2.29
UBC9YDL064W TY1B-NL1Q12112 1755 aa0.75□□□□□ -2.29
UBC9YDL064W TY1B-GR1Q12141 1755 aa0.75□□□□□ -2.29
UBC9YDL064W TY1B-BLQ12490 1755 aa0.75□□□□□ -2.29
UBC9YDL064W NUP159P40477 1460 aa0.74□□□□□ -2.29
UBC9YDL064W MRPL44P19956 98 aa0.74□□□□□ -2.29
UBC9YDL064W YAL064WP39711 94 aa0.74□□□□□ -2.29
UBC9YDL064W HUG1Q6Q5K6 68 aa0.74□□□□□ -2.29
UBC9YDL064W RPO21P04050 1733 aaKnown RBP0.74□□□□□ -2.29
UBC9YDL064W GCN2P15442 1659 aa0.74□□□□□ -2.29
UBC9YDL064W ESP1Q03018 1630 aa0.74□□□□□ -2.29
UBC9YDL064W GDB1Q06625 1536 aa0.74□□□□□ -2.29
UBC9YDL064W GSC2P40989 1895 aa0.73□□□□□ -2.29
UBC9YDL064W YRF1-2P40105 1681 aa0.73□□□□□ -2.29
UBC9YDL064W RPL14AP36105 138 aaKnown RBP0.73□□□□□ -2.29
UBC9YDL064W RPL14BP38754 138 aaKnown RBP0.73□□□□□ -2.29
UBC9YDL064W TY3B-GQ99315 1547 aa0.73□□□□□ -2.29
UBC9YDL064W SPP41P38904 1435 aa0.72□□□□□ -2.29
UBC9YDL064W CHC1P22137 1653 aaKnown RBP0.72□□□□□ -2.29
UBC9YDL064W TOR2P32600 2474 aaKnown RBP0.72□□□□□ -2.29
UBC9YDL064W YLR157W-EP0CF00 54 aa0.72□□□□□ -2.29
UBC9YDL064W YLR296WQ05898 108 aa0.72□□□□□ -2.29
UBC9YDL064W KTI11Q3E840 82 aa0.72□□□□□ -2.29
UBC9YDL064W TRM732Q03496 1420 aa0.72□□□□□ -2.29
UBC9YDL064W YSF3P0C074 85 aaPredicted RBP0.71□□□□□ -2.3
UBC9YDL064W MRPL11P36521 249 aaPredicted RBP0.71□□□□□ -2.3
UBC9YDL064W YBR013CP38215 129 aa0.71□□□□□ -2.3
UBC9YDL064W MIC27P50945 234 aa0.71□□□□□ -2.3
UBC9YDL064W YOR034C-AQ3E735 80 aa0.71□□□□□ -2.3
UBC9YDL064W COA6Q3E846 104 aa0.71□□□□□ -2.3
UBC9YDL064W UTP20P35194 2493 aaKnown RBP0.7□□□□□ -2.3
UBC9YDL064W PFY1P07274 126 aa0.7□□□□□ -2.3
UBC9YDL064W GTT2Q12390 233 aa0.7□□□□□ -2.3
UBC9YDL064W PRP8P33334 2413 aaKnown RBP0.69□□□□□ -2.3
UBC9YDL064W YBT1P32386 1661 aa0.69□□□□□ -2.3
UBC9YDL064W MLP2P40457 1679 aa0.69□□□□□ -2.3
UBC9YDL064W POL1P13382 1468 aa0.69□□□□□ -2.3
UBC9YDL064W MMS22Q06164 1454 aa0.69□□□□□ -2.3
UBC9YDL064W AIM18P38884 321 aa0.69□□□□□ -2.3
UBC9YDL064W SDH7Q04401 133 aa0.69□□□□□ -2.3
UBC9YDL064W VPS13Q07878 3144 aa0.69□□□□□ -2.3
UBC9YDL064W SEN1Q00416 2231 aaKnown RBP0.69□□□□□ -2.3
UBC9YDL064W BCK1Q01389 1478 aa0.68□□□□□ -2.3
UBC9YDL064W IQG1Q12280 1495 aa0.68□□□□□ -2.3
UBC9YDL064W TOP2P06786 1428 aaKnown RBP0.68□□□□□ -2.3
UBC9YDL064W TVP18Q04767 167 aa0.68□□□□□ -2.3
UBC9YDL064W NUP188P52593 1655 aaKnown RBP0.68□□□□□ -2.3
UBC9YDL064W SNQ2P32568 1501 aaKnown RBP0.68□□□□□ -2.3
UBC9YDL064W FAS2P19097 1887 aaKnown RBP0.67□□□□□ -2.3
UBC9YDL064W RRP5Q05022 1729 aaKnown RBP0.67□□□□□ -2.3
UBC9YDL064W GCN1P33892 2672 aaKnown RBP0.67□□□□□ -2.3
UBC9YDL064W SSN2P38931 1420 aa0.67□□□□□ -2.3
UBC9YDL064W RPC19P28000 142 aaKnown RBP0.67□□□□□ -2.3
UBC9YDL064W ELC1Q03071 99 aa0.67□□□□□ -2.3
UBC9YDL064W YDR034W-BQ6Q5X2 51 aa0.67□□□□□ -2.3
UBC9YDL064W HAP1P0CE41 1502 aa0.67□□□□□ -2.3
UBC9YDL064W FKS3Q04952 1785 aa0.67□□□□□ -2.3
UBC9YDL064W LAA1P39526 2014 aa0.67□□□□□ -2.3
UBC9YDL064W IML1P47170 1584 aa0.66□□□□□ -2.3
UBC9YDL064W PDR11P40550 1411 aa0.66□□□□□ -2.3
UBC9YDL064W URB1P34241 1764 aaKnown RBP0.66□□□□□ -2.3
UBC9YDL064W STU1P38198 1513 aa0.66□□□□□ -2.3
UBC9YDL064W PAU21P0CE86 164 aa0.66□□□□□ -2.3
UBC9YDL064W PAU22P0CE87 164 aa0.66□□□□□ -2.3
UBC9YDL064W MYO4P32492 1471 aa0.66□□□□□ -2.3
UBC9YDL064W FMP27Q06179 2628 aa0.66□□□□□ -2.3
UBC9YDL064W TSC11P40061 1430 aa0.65□□□□□ -2.3
UBC9YDL064W SNT2P53127 1403 aa0.65□□□□□ -2.3
UBC9YDL064W VTH1P40438 1549 aa0.65□□□□□ -2.31
UBC9YDL064W VTH2P40890 1549 aa0.65□□□□□ -2.31
UBC9YDL064W SNF2P22082 1703 aa0.65□□□□□ -2.31
UBC9YDL064W CYC2P38909 366 aa0.65□□□□□ -2.31
UBC9YDL064W HSP10P38910 106 aa0.65□□□□□ -2.31
UBC9YDL064W CSN9Q03981 162 aa0.65□□□□□ -2.31
UBC9YDL064W PDR5P33302 1511 aaKnown RBP0.64□□□□□ -2.31
UBC9YDL064W HAP3P13434 144 aa0.64□□□□□ -2.31
UBC9YDL064W PRS3P38689 320 aaKnown RBP0.64□□□□□ -2.31
UBC9YDL064W PHS1P40857 217 aa0.64□□□□□ -2.31
UBC9YDL064W VMR1P38735 1592 aa0.64□□□□□ -2.31
Retrieved 100 of 5,963 RNA–protein pairs in 30.1 ms