RNA–Protein interactions for RNA: YBR148W

YSW1, Transcript of Protein required for normal prospore membrane formation, yeast

Gene YSW1, Length 1,830 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YSW1	YBR148W	YLR296W	Q05898	108 aa		0.88	□□□□□ -2.27
YSW1	YBR148W	YLR365W	Q7LIF2	110 aa		0.88	□□□□□ -2.27
YSW1	YBR148W	TSC11	P40061	1430 aa		0.88	□□□□□ -2.27
YSW1	YBR148W	TRM732	Q03496	1420 aa		0.88	□□□□□ -2.27
YSW1	YBR148W	RPL36B	O14455	100 aa	Known RBP	0.87	□□□□□ -2.27
YSW1	YBR148W	RPL36A	P05745	100 aa	Predicted RBP	0.87	□□□□□ -2.27
YSW1	YBR148W	HYP2	P23301	157 aa	Known RBP	0.87	□□□□□ -2.27
YSW1	YBR148W	BUD23	P25627	275 aa	Predicted RBP	0.87	□□□□□ -2.27
YSW1	YBR148W	COX23	P38824	151 aa		0.87	□□□□□ -2.27
YSW1	YBR148W	GNA1	P43577	159 aa	Predicted RBP	0.87	□□□□□ -2.27
YSW1	YBR148W	HPA2	Q06592	156 aa		0.87	□□□□□ -2.27
YSW1	YBR148W	YPL261C	Q08976	102 aa		0.87	□□□□□ -2.27
YSW1	YBR148W	PCC1	Q3E833	88 aa		0.87	□□□□□ -2.27
YSW1	YBR148W	MIC10	Q96VH5	97 aa		0.87	□□□□□ -2.27
YSW1	YBR148W	PAU19	P0CE85	124 aa		0.87	□□□□□ -2.27
YSW1	YBR148W	PAU3	P25610	124 aa		0.87	□□□□□ -2.27
YSW1	YBR148W	YER187W	P40102	141 aa		0.87	□□□□□ -2.27
YSW1	YBR148W	COA4	Q05809	96 aa		0.87	□□□□□ -2.27
YSW1	YBR148W	TOP2	P06786	1428 aa	Known RBP	0.86	□□□□□ -2.27
YSW1	YBR148W	HMRA2	P0CY13	119 aa		0.86	□□□□□ -2.27
YSW1	YBR148W	DAD1	Q12248	94 aa		0.86	□□□□□ -2.27
YSW1	YBR148W	YLR285C-A	Q3E771	56 aa		0.86	□□□□□ -2.27
YSW1	YBR148W	OST5	Q92316	86 aa		0.86	□□□□□ -2.27
YSW1	YBR148W	YSF3	P0C074	85 aa	Predicted RBP	0.85	□□□□□ -2.27
YSW1	YBR148W	UBC5	P15732	148 aa		0.85	□□□□□ -2.27
YSW1	YBR148W	YBR090C	P38253	122 aa		0.85	□□□□□ -2.27
YSW1	YBR148W	CYB5	P40312	120 aa		0.85	□□□□□ -2.27
YSW1	YBR148W	SNN1	P48232	102 aa		0.85	□□□□□ -2.27
YSW1	YBR148W	ZEO1	Q08245	113 aa		0.85	□□□□□ -2.27
YSW1	YBR148W	LYS2	P07702	1392 aa		0.85	□□□□□ -2.27
YSW1	YBR148W	KRE5	P22023	1365 aa		0.85	□□□□□ -2.27
YSW1	YBR148W	SRX1	P36077	127 aa		0.85	□□□□□ -2.27
YSW1	YBR148W	YIL163C	P40448	117 aa		0.85	□□□□□ -2.27
YSW1	YBR148W	YIR020C	P40575	100 aa		0.85	□□□□□ -2.27
YSW1	YBR148W	GTT1	P40582	234 aa		0.85	□□□□□ -2.27
YSW1	YBR148W	RPL22B	P56628	122 aa	Known RBP	0.85	□□□□□ -2.27
YSW1	YBR148W	SLH1	P53327	1967 aa	Known RBP	0.84	□□□□□ -2.28
YSW1	YBR148W	YJL197C-A	P0C5P0	93 aa		0.84	□□□□□ -2.28
YSW1	YBR148W	PAU16	P35994	123 aa		0.84	□□□□□ -2.28
YSW1	YBR148W	PAU15	P40585	124 aa		0.84	□□□□□ -2.28
YSW1	YBR148W	YGR164W	P53291	111 aa		0.84	□□□□□ -2.28
YSW1	YBR148W	YOR289W	Q12012	251 aa	Predicted RBP	0.84	□□□□□ -2.28
YSW1	YBR148W	RPL22A	P05749	121 aa	Known RBP	0.83	□□□□□ -2.28
YSW1	YBR148W	YOL013W-A	P0C272	63 aa	Predicted RBP	0.83	□□□□□ -2.28
YSW1	YBR148W	PDR11	P40550	1411 aa		0.83	□□□□□ -2.28
YSW1	YBR148W	MIC27	P50945	234 aa		0.83	□□□□□ -2.28
YSW1	YBR148W	CCW12	Q12127	133 aa		0.83	□□□□□ -2.28
YSW1	YBR148W	YCL001W-B	Q96VH2	84 aa		0.83	□□□□□ -2.28
YSW1	YBR148W	DNA2	P38859	1522 aa		0.83	□□□□□ -2.28
YSW1	YBR148W	PFY1	P07274	126 aa		0.82	□□□□□ -2.28
YSW1	YBR148W	UBC4	P15731	148 aa		0.82	□□□□□ -2.28
YSW1	YBR148W	YBR013C	P38215	129 aa		0.82	□□□□□ -2.28
YSW1	YBR148W	HUR1	P45820	110 aa		0.82	□□□□□ -2.28
YSW1	YBR148W	YMR090W	Q04304	227 aa	Known RBP	0.82	□□□□□ -2.28
YSW1	YBR148W	LCL2	Q08045	131 aa		0.82	□□□□□ -2.28
YSW1	YBR148W	ENV10	Q99382	181 aa		0.82	□□□□□ -2.28
YSW1	YBR148W	YRF1-3	P0CX14	1859 aa		0.82	□□□□□ -2.28
YSW1	YBR148W	YRF1-7	P0CX15	1859 aa		0.82	□□□□□ -2.28
YSW1	YBR148W	YRF1-6	P53819	1859 aa		0.82	□□□□□ -2.28
YSW1	YBR148W	POR2	P40478	281 aa		0.82	□□□□□ -2.28
YSW1	YBR148W	RSM19	P53733	91 aa	Predicted RBP	0.82	□□□□□ -2.28
YSW1	YBR148W	FIT3	Q08907	204 aa		0.82	□□□□□ -2.28
YSW1	YBR148W	RRT15	Q3E811	62 aa		0.82	□□□□□ -2.28
YSW1	YBR148W	KSH1	Q8TGJ3	72 aa		0.82	□□□□□ -2.28
YSW1	YBR148W	HFA1	P32874	2273 aa		0.81	□□□□□ -2.28
YSW1	YBR148W	YCR001W	P25347	104 aa		0.81	□□□□□ -2.28
YSW1	YBR148W	PAU5	P43575	122 aa		0.81	□□□□□ -2.28
YSW1	YBR148W	YOS1	Q3E834	85 aa		0.81	□□□□□ -2.28
YSW1	YBR148W	ROM2	P51862	1356 aa	Known RBP	0.81	□□□□□ -2.28
YSW1	YBR148W	TY4B-J	P47024	1803 aa		0.81	□□□□□ -2.28
YSW1	YBR148W	MRPS12	P53732	153 aa		0.8	□□□□□ -2.28
YSW1	YBR148W	YNL122C	P53921	115 aa	Predicted RBP	0.8	□□□□□ -2.28
YSW1	YBR148W	COA6	Q3E846	104 aa		0.8	□□□□□ -2.28
YSW1	YBR148W	SKI3	P17883	1432 aa	Known RBP	0.8	□□□□□ -2.28
YSW1	YBR148W	RPS22A	P0C0W1	130 aa	Known RBP	0.8	□□□□□ -2.28
YSW1	YBR148W	VMA21	P41806	77 aa		0.8	□□□□□ -2.28
YSW1	YBR148W	VPS55	P47111	140 aa		0.8	□□□□□ -2.28
YSW1	YBR148W	IRC21	Q04772	201 aa		0.8	□□□□□ -2.28
YSW1	YBR148W	YLR363W-A	Q3E747	85 aa		0.8	□□□□□ -2.28
YSW1	YBR148W	YCR075W-A	Q3E830	75 aa		0.8	□□□□□ -2.28
YSW1	YBR148W	LAA1	P39526	2014 aa		0.79	□□□□□ -2.28
YSW1	YBR148W	TY3B-I	Q7LHG5	1498 aa	Known RBP	0.79	□□□□□ -2.28
YSW1	YBR148W	YAR064W	P39563	99 aa		0.79	□□□□□ -2.28
YSW1	YBR148W	MVB12	P42939	101 aa		0.79	□□□□□ -2.28
YSW1	YBR148W	LSM6	Q06406	86 aa	Known RBP	0.79	□□□□□ -2.28
YSW1	YBR148W	SCP1	Q08873	200 aa		0.79	□□□□□ -2.28
YSW1	YBR148W	YGL194C-A	Q2V2P6	80 aa		0.79	□□□□□ -2.28
YSW1	YBR148W	BNI1	P41832	1953 aa		0.79	□□□□□ -2.28
YSW1	YBR148W	HMRA1	P0CY11	126 aa		0.78	□□□□□ -2.28
YSW1	YBR148W	HHY1	P39982	102 aa		0.78	□□□□□ -2.28
YSW1	YBR148W	EMC5	P40540	141 aa		0.78	□□□□□ -2.28
YSW1	YBR148W	SWC7	Q06707	132 aa		0.78	□□□□□ -2.28
YSW1	YBR148W	MYO1	P08964	1928 aa		0.78	□□□□□ -2.28
YSW1	YBR148W	MSL1	P40567	111 aa	Predicted RBP	0.78	□□□□□ -2.29
YSW1	YBR148W	MGR2	Q02889	113 aa		0.78	□□□□□ -2.29
YSW1	YBR148W	YDR029W	Q12111	104 aa		0.78	□□□□□ -2.29
YSW1	YBR148W	HUG1	Q6Q5K6	68 aa		0.78	□□□□□ -2.29
YSW1	YBR148W	GEA1	P47102	1408 aa	Predicted RBP	0.78	□□□□□ -2.29
YSW1	YBR148W	GEA2	P39993	1459 aa	Known RBP	0.77	□□□□□ -2.29
YSW1	YBR148W	YLR419W	Q06698	1435 aa	Known RBP	0.77	□□□□□ -2.29

Retrieved 100 of 5,963 RNA–protein pairs in 40.2 ms