RNA–Protein interactions for RNA: YBR106W

PHO88, Transcript of Probable membrane protein, yeastyeast

Gene PHO88, Length 567 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PHO88YBR106W SHH3Q04487 196 aa2.3□□□□□ -2.04
PHO88YBR106W GAL83Q04739 417 aa2.3□□□□□ -2.04
PHO88YBR106W UPS1Q05776 175 aa2.3□□□□□ -2.04
PHO88YBR106W ATG40Q99325 256 aa2.3□□□□□ -2.04
PHO88YBR106W RAS2P01120 322 aaKnown RBP2.29□□□□□ -2.04
PHO88YBR106W ANB1P19211 157 aa2.29□□□□□ -2.04
PHO88YBR106W HYP2P23301 157 aaKnown RBP2.29□□□□□ -2.04
PHO88YBR106W RPB11P38902 120 aa2.29□□□□□ -2.04
PHO88YBR106W YAR029WP39549 74 aa2.29□□□□□ -2.04
PHO88YBR106W YEL028WP39989 153 aa2.29□□□□□ -2.04
PHO88YBR106W CCS1P40202 249 aaKnown RBP2.29□□□□□ -2.04
PHO88YBR106W CUP9P41817 306 aa2.29□□□□□ -2.04
PHO88YBR106W RCE1Q03530 315 aa2.29□□□□□ -2.04
PHO88YBR106W MIX17Q03667 156 aa2.29□□□□□ -2.04
PHO88YBR106W YOR097CQ12274 175 aaPredicted RBP2.29□□□□□ -2.04
PHO88YBR106W YOR376W-AQ3E805 51 aa2.29□□□□□ -2.04
PHO88YBR106W YAR023CD6VPM8 179 aa2.28□□□□□ -2.04
PHO88YBR106W HSP12P22943 109 aaKnown RBP2.28□□□□□ -2.04
PHO88YBR106W PAM17P36147 197 aa2.28□□□□□ -2.04
PHO88YBR106W SNU13P39990 126 aaKnown RBP2.28□□□□□ -2.04
PHO88YBR106W GNA1P43577 159 aaPredicted RBP2.28□□□□□ -2.04
PHO88YBR106W ANT1Q06497 328 aa2.28□□□□□ -2.04
PHO88YBR106W DDP1Q99321 188 aaKnown RBP2.28□□□□□ -2.04
PHO88YBR106W MDH2P22133 377 aa2.27□□□□□ -2.05
PHO88YBR106W YHR022CP38763 256 aa2.27□□□□□ -2.05
PHO88YBR106W DSE2P38844 325 aa2.27□□□□□ -2.05
PHO88YBR106W NSA2P40078 261 aaKnown RBP2.27□□□□□ -2.05
PHO88YBR106W YGR164WP53291 111 aa2.27□□□□□ -2.05
PHO88YBR106W ELC1Q03071 99 aa2.27□□□□□ -2.05
PHO88YBR106W CUE4Q04201 117 aaPredicted RBP2.27□□□□□ -2.05
PHO88YBR106W YMR103CQ04436 120 aa2.27□□□□□ -2.05
PHO88YBR106W POR1P04840 283 aaKnown RBP2.26□□□□□ -2.05
PHO88YBR106W DDR48P18899 430 aaKnown RBP2.26□□□□□ -2.05
PHO88YBR106W YCR050CP25630 102 aa2.26□□□□□ -2.05
PHO88YBR106W GAA1P39012 614 aa2.26□□□□□ -2.05
PHO88YBR106W NSE4P43124 402 aa2.26□□□□□ -2.05
PHO88YBR106W BOL2P53082 120 aa2.26□□□□□ -2.05
PHO88YBR106W RIM9Q04734 239 aa2.26□□□□□ -2.05
PHO88YBR106W YHR130CP38834 111 aa2.25□□□□□ -2.05
PHO88YBR106W YER135CP40082 130 aa2.25□□□□□ -2.05
PHO88YBR106W PAM16P42949 149 aa2.25□□□□□ -2.05
PHO88YBR106W RGM1Q00453 211 aa2.25□□□□□ -2.05
PHO88YBR106W KEI1Q06346 221 aa2.25□□□□□ -2.05
PHO88YBR106W SYM1Q06563 197 aa2.25□□□□□ -2.05
PHO88YBR106W UIP4Q08926 304 aa2.25□□□□□ -2.05
PHO88YBR106W RAD28Q12021 506 aa2.25□□□□□ -2.05
PHO88YBR106W RAD6P06104 172 aa2.24□□□□□ -2.05
PHO88YBR106W FZF1P32805 299 aa2.24□□□□□ -2.05
PHO88YBR106W TMA19P35691 167 aaKnown RBP2.24□□□□□ -2.05
PHO88YBR106W YAL064WP39711 94 aa2.24□□□□□ -2.05
PHO88YBR106W SPC25P40014 221 aa2.24□□□□□ -2.05
PHO88YBR106W YFR035CP43608 114 aa2.24□□□□□ -2.05
PHO88YBR106W CYT2Q00873 224 aa2.24□□□□□ -2.05
PHO88YBR106W ATP20Q12233 115 aa2.24□□□□□ -2.05
PHO88YBR106W SEC16P48415 2195 aaKnown RBP2.23□□□□□ -2.05
PHO88YBR106W YLR236CA0A023PZG4 107 aa2.23□□□□□ -2.05
PHO88YBR106W PEP8P40335 379 aa2.23□□□□□ -2.05
PHO88YBR106W GTT1P40582 234 aa2.23□□□□□ -2.05
PHO88YBR106W YNR064CP53750 290 aa2.23□□□□□ -2.05
PHO88YBR106W YDR102CQ03864 110 aa2.23□□□□□ -2.05
PHO88YBR106W CSI2Q08054 341 aa2.23□□□□□ -2.05
PHO88YBR106W RPL13AQ12690 199 aaPredicted RBP2.23□□□□□ -2.05
PHO88YBR106W KSH1Q8TGJ3 72 aa2.23□□□□□ -2.05
PHO88YBR106W MAK31P23059 88 aa2.22□□□□□ -2.05
PHO88YBR106W YCR099CP25657 155 aa2.22□□□□□ -2.05
PHO88YBR106W EMP24P32803 203 aaKnown RBP2.22□□□□□ -2.05
PHO88YBR106W MPC3P53311 146 aa2.22□□□□□ -2.05
PHO88YBR106W YCL001W-AP87012 153 aa2.22□□□□□ -2.05
PHO88YBR106W YMR082CQ04276 118 aa2.22□□□□□ -2.05
PHO88YBR106W YPR174CQ06616 221 aaPredicted RBP2.22□□□□□ -2.05
PHO88YBR106W MED11Q99278 115 aa2.22□□□□□ -2.05
PHO88YBR106W COX5BP00425 151 aa2.21□□□□□ -2.06
PHO88YBR106W UBC4P15731 148 aa2.21□□□□□ -2.06
PHO88YBR106W NRG2P38082 220 aa2.21□□□□□ -2.06
PHO88YBR106W SML1Q04964 104 aa2.21□□□□□ -2.06
PHO88YBR106W HMRA1P0CY11 126 aa2.2□□□□□ -2.06
PHO88YBR106W SEC11P15367 167 aa2.2□□□□□ -2.06
PHO88YBR106W RRT1P38192 103 aa2.2□□□□□ -2.06
PHO88YBR106W YHL042WP38729 150 aa2.2□□□□□ -2.06
PHO88YBR106W KNH1P50112 268 aa2.2□□□□□ -2.06
PHO88YBR106W YNR077CP53758 84 aa2.2□□□□□ -2.06
PHO88YBR106W POP3P53833 195 aaPredicted RBP2.2□□□□□ -2.06
PHO88YBR106W LIP1Q03579 150 aa2.2□□□□□ -2.06
PHO88YBR106W FIT1Q04433 528 aa2.2□□□□□ -2.06
PHO88YBR106W COA4Q05809 96 aa2.2□□□□□ -2.06
PHO88YBR106W YHR007C-AQ07074 71 aa2.2□□□□□ -2.06
PHO88YBR106W YOR385WQ08909 290 aa2.2□□□□□ -2.06
PHO88YBR106W YOL162WP0CF19 215 aa2.19□□□□□ -2.06
PHO88YBR106W SRB6P32570 121 aa2.19□□□□□ -2.06
PHO88YBR106W IPT1P38954 527 aa2.19□□□□□ -2.06
PHO88YBR106W DAN1P47178 298 aa2.19□□□□□ -2.06
PHO88YBR106W SPG1P50088 95 aa2.19□□□□□ -2.06
PHO88YBR106W MZM1Q03429 123 aaPredicted RBP2.19□□□□□ -2.06
PHO88YBR106W GPI11Q06636 219 aa2.19□□□□□ -2.06
PHO88YBR106W RRT7Q07829 113 aa2.19□□□□□ -2.06
PHO88YBR106W FIT3Q08907 204 aa2.19□□□□□ -2.06
PHO88YBR106W YOR015WQ12169 119 aa2.19□□□□□ -2.06
PHO88YBR106W CDC39P25655 2108 aaKnown RBP2.18□□□□□ -2.06
PHO88YBR106W RPL13BP40212 199 aaKnown RBP2.18□□□□□ -2.06
PHO88YBR106W FLX1P40464 311 aa2.18□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 38.3 ms