RNA–Protein interactions for RNA: YAL030W

SNC1, Transcript of Vesicle membrane receptor protein (v-SNARE), yeastyeast

Gene SNC1, Length 354 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytosol, Endoplasmic reticulum, Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNC1YAL030W YCR001WP25347 104 aa1.01□□□□□ -2.25
SNC1YAL030W YJL009WP47078 108 aa1.01□□□□□ -2.25
SNC1YAL030W YNL122CP53921 115 aaPredicted RBP1.01□□□□□ -2.25
SNC1YAL030W DNA2P38859 1522 aa1□□□□□ -2.25
SNC1YAL030W SEC7P11075 2009 aaKnown RBP1□□□□□ -2.25
SNC1YAL030W RPS22AP0C0W1 130 aaKnown RBP1□□□□□ -2.25
SNC1YAL030W YHR130CP38834 111 aa1□□□□□ -2.25
SNC1YAL030W HUA1P40325 198 aa1□□□□□ -2.25
SNC1YAL030W PAM16P42949 149 aa1□□□□□ -2.25
SNC1YAL030W YOR097CQ12274 175 aaPredicted RBP1□□□□□ -2.25
SNC1YAL030W RPS22BQ3E7Y3 130 aaKnown RBP1□□□□□ -2.25
SNC1YAL030W HFA1P32874 2273 aa1□□□□□ -2.25
SNC1YAL030W ROM2P51862 1356 aaKnown RBP0.99□□□□□ -2.25
SNC1YAL030W YCR099CP25657 155 aa0.99□□□□□ -2.25
SNC1YAL030W LHP1P33399 275 aaKnown RBP0.99□□□□□ -2.25
SNC1YAL030W YFR035CP43608 114 aa0.99□□□□□ -2.25
SNC1YAL030W YIL014C-AQ02598 104 aa0.99□□□□□ -2.25
SNC1YAL030W YLR194CQ05777 254 aa0.99□□□□□ -2.25
SNC1YAL030W YSF3P0C074 85 aaPredicted RBP0.98□□□□□ -2.25
SNC1YAL030W YER137CP40083 148 aaKnown RBP0.98□□□□□ -2.25
SNC1YAL030W MVB12P42939 101 aa0.98□□□□□ -2.25
SNC1YAL030W MGR2Q02889 113 aa0.98□□□□□ -2.25
SNC1YAL030W YPL261CQ08976 102 aa0.98□□□□□ -2.25
SNC1YAL030W DAD1Q12248 94 aa0.98□□□□□ -2.25
SNC1YAL030W COA6Q3E846 104 aa0.98□□□□□ -2.25
SNC1YAL030W OST5Q92316 86 aa0.98□□□□□ -2.25
SNC1YAL030W RPL22AP05749 121 aaKnown RBP0.97□□□□□ -2.25
SNC1YAL030W YBR013CP38215 129 aa0.97□□□□□ -2.25
SNC1YAL030W MIC27P50945 234 aa0.97□□□□□ -2.25
SNC1YAL030W PAU12P53343 120 aa0.97□□□□□ -2.25
SNC1YAL030W PCC1Q3E833 88 aa0.97□□□□□ -2.25
SNC1YAL030W ENV10Q99382 181 aa0.97□□□□□ -2.25
SNC1YAL030W YER039C-AP0CD97 72 aa0.96□□□□□ -2.26
SNC1YAL030W EMP24P32803 203 aaKnown RBP0.96□□□□□ -2.26
SNC1YAL030W SRX1P36077 127 aa0.96□□□□□ -2.26
SNC1YAL030W HHY1P39982 102 aa0.96□□□□□ -2.26
SNC1YAL030W YER187WP40102 141 aa0.96□□□□□ -2.26
SNC1YAL030W CYB5P40312 120 aa0.96□□□□□ -2.26
SNC1YAL030W YIL163CP40448 117 aa0.96□□□□□ -2.26
SNC1YAL030W SNN1P48232 102 aa0.96□□□□□ -2.26
SNC1YAL030W YLR365WQ7LIF2 110 aa0.96□□□□□ -2.26
SNC1YAL030W YHR213W-BQ8TGK1 99 aa0.96□□□□□ -2.26
SNC1YAL030W TY4B-HP0C2J7 1802 aa0.96□□□□□ -2.26
SNC1YAL030W YJL197C-AP0C5P0 93 aa0.95□□□□□ -2.26
SNC1YAL030W RGI1P40043 161 aaPredicted RBP0.95□□□□□ -2.26
SNC1YAL030W RPL37AP49166 88 aaKnown RBP0.95□□□□□ -2.26
SNC1YAL030W RPL22BP56628 122 aaKnown RBP0.95□□□□□ -2.26
SNC1YAL030W YPK9Q12697 1472 aa0.94□□□□□ -2.26
SNC1YAL030W MRPL31P14063 131 aaPredicted RBP0.94□□□□□ -2.26
SNC1YAL030W PAU2P32612 120 aa0.94□□□□□ -2.26
SNC1YAL030W COX23P38824 151 aa0.94□□□□□ -2.26
SNC1YAL030W GTT1P40582 234 aa0.94□□□□□ -2.26
SNC1YAL030W RPS12P48589 143 aaKnown RBP0.94□□□□□ -2.26
SNC1YAL030W FIT3Q08907 204 aa0.94□□□□□ -2.26
SNC1YAL030W YGL041C-BQ3E750 60 aa0.94□□□□□ -2.26
SNC1YAL030W HUG1Q6Q5K6 68 aa0.94□□□□□ -2.26
SNC1YAL030W HMRA2P0CY13 119 aa0.93□□□□□ -2.26
SNC1YAL030W YMR141CP40211 102 aa0.93□□□□□ -2.26
SNC1YAL030W POR2P40478 281 aa0.93□□□□□ -2.26
SNC1YAL030W VMA21P41806 77 aa0.93□□□□□ -2.26
SNC1YAL030W GNA1P43577 159 aaPredicted RBP0.93□□□□□ -2.26
SNC1YAL030W YLR363W-AQ3E747 85 aa0.93□□□□□ -2.26
SNC1YAL030W YLR285C-AQ3E771 56 aa0.93□□□□□ -2.26
SNC1YAL030W YRF1-1P0CX20 1796 aa0.93□□□□□ -2.26
SNC1YAL030W YRF1-5P0CX21 1796 aa0.93□□□□□ -2.26
SNC1YAL030W YRF1-8P0CX22 1796 aa0.93□□□□□ -2.26
SNC1YAL030W TSC11P40061 1430 aa0.92□□□□□ -2.26
SNC1YAL030W PAU19P0CE85 124 aa0.92□□□□□ -2.26
SNC1YAL030W PAU3P25610 124 aa0.92□□□□□ -2.26
SNC1YAL030W PAU24P38155 120 aa0.92□□□□□ -2.26
SNC1YAL030W YMR321CQ04898 105 aa0.92□□□□□ -2.26
SNC1YAL030W OCA6Q12454 224 aa0.92□□□□□ -2.26
SNC1YAL030W YGR240C-AQ3E786 66 aa0.92□□□□□ -2.26
SNC1YAL030W BNI1P41832 1953 aa0.91□□□□□ -2.26
SNC1YAL030W BUD23P25627 275 aaPredicted RBP0.91□□□□□ -2.26
SNC1YAL030W YEA6P39953 335 aa0.91□□□□□ -2.26
SNC1YAL030W HUR1P45820 110 aa0.91□□□□□ -2.26
SNC1YAL030W ICS3P47034 131 aa0.91□□□□□ -2.26
SNC1YAL030W VPS55P47111 140 aa0.91□□□□□ -2.26
SNC1YAL030W YGR164WP53291 111 aa0.91□□□□□ -2.26
SNC1YAL030W SWC7Q06707 132 aa0.91□□□□□ -2.26
SNC1YAL030W FYV7Q12247 151 aa0.91□□□□□ -2.26
SNC1YAL030W RPA190P10964 1664 aaKnown RBP0.91□□□□□ -2.26
SNC1YAL030W PDR11P40550 1411 aa0.9□□□□□ -2.26
SNC1YAL030W SRB6P32570 121 aa0.9□□□□□ -2.27
SNC1YAL030W FAS2P19097 1887 aaKnown RBP0.89□□□□□ -2.27
SNC1YAL030W LYS2P07702 1392 aa0.89□□□□□ -2.27
SNC1YAL030W YER188C-AP0C0V2 99 aa0.89□□□□□ -2.27
SNC1YAL030W YHR138CP38841 114 aaPredicted RBP0.89□□□□□ -2.27
SNC1YAL030W YIR020CP40575 100 aa0.89□□□□□ -2.27
SNC1YAL030W YMR090WQ04304 227 aaKnown RBP0.89□□□□□ -2.27
SNC1YAL030W YMR103CQ04436 120 aa0.89□□□□□ -2.27
SNC1YAL030W SEC16P48415 2195 aaKnown RBP0.89□□□□□ -2.27
SNC1YAL030W TY3B-IQ7LHG5 1498 aaKnown RBP0.88□□□□□ -2.27
SNC1YAL030W RPL43AP0CX25 92 aaKnown RBP0.88□□□□□ -2.27
SNC1YAL030W RPL43BP0CX26 92 aa0.88□□□□□ -2.27
SNC1YAL030W PAU16P35994 123 aa0.88□□□□□ -2.27
SNC1YAL030W PAU15P40585 124 aa0.88□□□□□ -2.27
SNC1YAL030W RPL37BP51402 88 aaKnown RBP0.88□□□□□ -2.27
SNC1YAL030W LSM6Q06406 86 aaKnown RBP0.88□□□□□ -2.27
Retrieved 100 of 5,963 RNA–protein pairs in 108.5 ms