RNA–Protein interactions for RNA: YPR108W

RPN7, Transcript of Essential non-ATPase regulatory subunit of the 26S proteasome, yeast

Gene RPN7, Length 1,290 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPN7	YPR108W	TEM1	P38987	245 aa		4.72	□□□□□ -1.65
RPN7	YPR108W	THG1	P53215	237 aa	Known RBP	4.72	□□□□□ -1.65
RPN7	YPR108W	YNL092W	P53934	400 aa		4.72	□□□□□ -1.65
RPN7	YPR108W	RPL15B	P54780	204 aa	Predicted RBP	4.72	□□□□□ -1.65
RPN7	YPR108W	IZH1	Q03419	316 aa		4.72	□□□□□ -1.65
RPN7	YPR108W	ARC18	Q05933	178 aa	Known RBP	4.72	□□□□□ -1.65
RPN7	YPR108W	RXT3	Q07458	294 aa		4.72	□□□□□ -1.65
RPN7	YPR108W	TOR2	P32600	2474 aa	Known RBP	4.71	□□□□□ -1.65
RPN7	YPR108W	CMC1	P36064	111 aa		4.71	□□□□□ -1.66
RPN7	YPR108W	MIC12	P38341	106 aa		4.71	□□□□□ -1.66
RPN7	YPR108W	YHR140W	P38842	239 aa		4.71	□□□□□ -1.66
RPN7	YPR108W	GET2	P40056	285 aa		4.71	□□□□□ -1.66
RPN7	YPR108W	PRE5	P40302	234 aa	Known RBP	4.71	□□□□□ -1.66
RPN7	YPR108W	SNA4	Q07549	140 aa		4.71	□□□□□ -1.66
RPN7	YPR108W	TIM18	Q08749	192 aa		4.71	□□□□□ -1.66
RPN7	YPR108W	YOR352W	Q08816	343 aa		4.71	□□□□□ -1.66
RPN7	YPR108W	PRM3	Q08931	133 aa		4.71	□□□□□ -1.66
RPN7	YPR108W	RDL1	Q12305	139 aa	Known RBP	4.71	□□□□□ -1.66
RPN7	YPR108W	MRPL31	P14063	131 aa	Predicted RBP	4.7	□□□□□ -1.66
RPN7	YPR108W	YPS1	P32329	569 aa		4.7	□□□□□ -1.66
RPN7	YPR108W	YKL102C	P34249	101 aa		4.7	□□□□□ -1.66
RPN7	YPR108W	GPP2	P40106	250 aa	Known RBP	4.7	□□□□□ -1.66
RPN7	YPR108W	GZF3	P42944	551 aa	Known RBP	4.7	□□□□□ -1.66
RPN7	YPR108W	YGR219W	P53307	113 aa		4.7	□□□□□ -1.66
RPN7	YPR108W	RAV2	Q03956	351 aa		4.7	□□□□□ -1.66
RPN7	YPR108W	SPG4	Q04438	115 aa		4.7	□□□□□ -1.66
RPN7	YPR108W	SRL1	Q08673	210 aa		4.7	□□□□□ -1.66
RPN7	YPR108W	YOR029W	Q12243	111 aa		4.7	□□□□□ -1.66
RPN7	YPR108W	TIM22	Q12328	207 aa		4.7	□□□□□ -1.66
RPN7	YPR108W	ATO3	Q12359	275 aa		4.7	□□□□□ -1.66
RPN7	YPR108W	YFL068W	P0CX99	160 aa		4.69	□□□□□ -1.66
RPN7	YPR108W	YLL066W-A	P0CY00	160 aa		4.69	□□□□□ -1.66
RPN7	YPR108W	YLL067W-A	P0CY01	160 aa		4.69	□□□□□ -1.66
RPN7	YPR108W	APS1	P35181	156 aa		4.69	□□□□□ -1.66
RPN7	YPR108W	YFL015C	P43578	164 aa		4.69	□□□□□ -1.66
RPN7	YPR108W	TOM7	P53507	60 aa		4.69	□□□□□ -1.66
RPN7	YPR108W	TVP18	Q04767	167 aa		4.69	□□□□□ -1.66
RPN7	YPR108W	YHR213W	P0CI67	198 aa		4.68	□□□□□ -1.66
RPN7	YPR108W	RPL23A	P0CX41	137 aa	Known RBP	4.68	□□□□□ -1.66
RPN7	YPR108W	RPL23B	P0CX42	137 aa	Known RBP	4.68	□□□□□ -1.66
RPN7	YPR108W	LSM2	P38203	95 aa	Known RBP	4.68	□□□□□ -1.66
RPN7	YPR108W	GAT2	P40209	560 aa		4.68	□□□□□ -1.66
RPN7	YPR108W	YIL012W	P40551	113 aa		4.68	□□□□□ -1.66
RPN7	YPR108W	DUO1	P53168	247 aa	Known RBP	4.68	□□□□□ -1.66
RPN7	YPR108W	SDS23	P53172	527 aa		4.68	□□□□□ -1.66
RPN7	YPR108W	GPI19	Q04082	140 aa		4.68	□□□□□ -1.66
RPN7	YPR108W	HOR7	Q05827	59 aa		4.68	□□□□□ -1.66
RPN7	YPR108W	TMC1	Q08422	150 aa	Predicted RBP	4.68	□□□□□ -1.66
RPN7	YPR108W	RPL27B	P0C2H7	136 aa	Known RBP	4.67	□□□□□ -1.66
RPN7	YPR108W	SCM4	P32564	187 aa		4.67	□□□□□ -1.66
RPN7	YPR108W	GRH1	Q04410	372 aa	Known RBP	4.67	□□□□□ -1.66
RPN7	YPR108W	PBP4	Q07362	185 aa	Known RBP	4.67	□□□□□ -1.66
RPN7	YPR108W	ERG27	Q12452	347 aa	Known RBP	4.67	□□□□□ -1.66
RPN7	YPR108W	RPL31A	P0C2H8	113 aa	Known RBP	4.66	□□□□□ -1.66
RPN7	YPR108W	RPB9	P27999	122 aa		4.66	□□□□□ -1.66
RPN7	YPR108W	VMA11	P32842	164 aa		4.66	□□□□□ -1.66
RPN7	YPR108W	YKR045C	P36138	183 aa		4.66	□□□□□ -1.66
RPN7	YPR108W	PAM17	P36147	197 aa		4.66	□□□□□ -1.66
RPN7	YPR108W	FYV4	P38783	130 aa	Predicted RBP	4.66	□□□□□ -1.66
RPN7	YPR108W	MRPL49	P40858	161 aa	Predicted RBP	4.66	□□□□□ -1.66
RPN7	YPR108W	HAC1	P41546	238 aa		4.66	□□□□□ -1.66
RPN7	YPR108W	IMP2	P46972	177 aa		4.66	□□□□□ -1.66
RPN7	YPR108W	TOS8	P53147	276 aa		4.66	□□□□□ -1.66
RPN7	YPR108W	YMR317W	Q04893	1140 aa		4.66	□□□□□ -1.66
RPN7	YPR108W	ATG39	Q06159	398 aa		4.66	□□□□□ -1.66
RPN7	YPR108W	PAU23	Q07987	124 aa		4.66	□□□□□ -1.66
RPN7	YPR108W	FSF1	Q12029	327 aa	Known RBP	4.66	□□□□□ -1.66
RPN7	YPR108W	FCY1	Q12178	158 aa		4.66	□□□□□ -1.66
RPN7	YPR108W	PAU17	Q12370	124 aa		4.66	□□□□□ -1.66
RPN7	YPR108W	SEC4	P07560	215 aa	Known RBP	4.65	□□□□□ -1.67
RPN7	YPR108W	RPL42A	P0CX27	106 aa	Known RBP	4.65	□□□□□ -1.67
RPN7	YPR108W	RPL42B	P0CX28	106 aa	Known RBP	4.65	□□□□□ -1.67
RPN7	YPR108W	YCR023C	P25351	611 aa		4.65	□□□□□ -1.67
RPN7	YPR108W	INO2	P26798	304 aa		4.65	□□□□□ -1.67
RPN7	YPR108W	UIP3	P39547	235 aa		4.65	□□□□□ -1.67
RPN7	YPR108W	MSL1	P40567	111 aa	Predicted RBP	4.65	□□□□□ -1.67
RPN7	YPR108W	YCH1	P42937	148 aa		4.65	□□□□□ -1.67
RPN7	YPR108W	VPS55	P47111	140 aa		4.65	□□□□□ -1.67
RPN7	YPR108W	YDR366C	P87287	132 aa		4.65	□□□□□ -1.67
RPN7	YPR108W	YBR126W-A	Q8TGU7	68 aa		4.65	□□□□□ -1.67
RPN7	YPR108W	MRP49	P32388	137 aa		4.64	□□□□□ -1.67
RPN7	YPR108W	GSP1	P32835	219 aa	Known RBP	4.64	□□□□□ -1.67
RPN7	YPR108W	GSP2	P32836	220 aa	Known RBP	4.64	□□□□□ -1.67
RPN7	YPR108W	YKL044W	P36092	106 aa		4.64	□□□□□ -1.67
RPN7	YPR108W	YJL027C	P47063	138 aa	Predicted RBP	4.64	□□□□□ -1.67
RPN7	YPR108W	YIP3	P53633	176 aa		4.64	□□□□□ -1.67
RPN7	YPR108W	YNL234W	P53857	426 aa		4.64	□□□□□ -1.67
RPN7	YPR108W	DPP1	Q05521	289 aa		4.64	□□□□□ -1.67
RPN7	YPR108W	YCR075W-A	Q3E830	75 aa		4.64	□□□□□ -1.67
RPN7	YPR108W	YER134C	P40081	178 aa		4.63	□□□□□ -1.67
RPN7	YPR108W	CDC40	P40968	455 aa	Predicted RBP	4.63	□□□□□ -1.67
RPN7	YPR108W	ALG13	P53178	202 aa		4.63	□□□□□ -1.67
RPN7	YPR108W	SEN15	Q04675	128 aa		4.63	□□□□□ -1.67
RPN7	YPR108W	CCW12	Q12127	133 aa		4.63	□□□□□ -1.67
RPN7	YPR108W	TPT1	Q12272	230 aa	Known RBP	4.63	□□□□□ -1.67
RPN7	YPR108W	YNL146C-A	Q3E7Z1	64 aa		4.63	□□□□□ -1.67
RPN7	YPR108W	YCR024C-B	Q3E7Z8	88 aa		4.63	□□□□□ -1.67
RPN7	YPR108W	YER145C-A	A0A023PYF4	145 aa		4.62	□□□□□ -1.67
RPN7	YPR108W	RPL43A	P0CX25	92 aa	Known RBP	4.62	□□□□□ -1.67
RPN7	YPR108W	RPL43B	P0CX26	92 aa		4.62	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 70 ms