RNA–Protein interactions for RNA: YPR103W

PRE2, Transcript of Beta 5 subunit of the 20S proteasome, yeastyeast

Gene PRE2, Length 864 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE2YPR103W CSH1P38287 376 aa2.47□□□□□ -2.01
PRE2YPR103W YER121WP40076 114 aa2.47□□□□□ -2.01
PRE2YPR103W YGL204CP53089 101 aa2.46□□□□□ -2.02
PRE2YPR103W HSK3P69852 69 aa2.46□□□□□ -2.02
PRE2YPR103W YDR476CQ03362 224 aa2.46□□□□□ -2.02
PRE2YPR103W RUB1Q03919 77 aa2.46□□□□□ -2.02
PRE2YPR103W YCR023CP25351 611 aa2.45□□□□□ -2.02
PRE2YPR103W GSP1P32835 219 aaKnown RBP2.45□□□□□ -2.02
PRE2YPR103W GTT1P40582 234 aa2.45□□□□□ -2.02
PRE2YPR103W FYV7Q12247 151 aa2.45□□□□□ -2.02
PRE2YPR103W SRP102P36057 244 aaPredicted RBP2.44□□□□□ -2.02
PRE2YPR103W VMA7P39111 118 aa2.44□□□□□ -2.02
PRE2YPR103W TMA20P89886 181 aaPredicted RBP2.44□□□□□ -2.02
PRE2YPR103W YPR127WQ06494 345 aa2.44□□□□□ -2.02
PRE2YPR103W RFU1Q08003 200 aa2.44□□□□□ -2.02
PRE2YPR103W YIL046W-AQ3E7Z4 54 aa2.44□□□□□ -2.02
PRE2YPR103W Q0144Q9ZZW2 109 aa2.44□□□□□ -2.02
PRE2YPR103W PET54P10834 293 aa2.43□□□□□ -2.02
PRE2YPR103W NHP6AP11632 93 aaKnown RBP2.43□□□□□ -2.02
PRE2YPR103W SPT14P32363 452 aa2.43□□□□□ -2.02
PRE2YPR103W FIG1P38224 298 aa2.43□□□□□ -2.02
PRE2YPR103W AIM18P38884 321 aa2.43□□□□□ -2.02
PRE2YPR103W RGI1P40043 161 aaPredicted RBP2.43□□□□□ -2.02
PRE2YPR103W MPM1P40364 252 aa2.43□□□□□ -2.02
PRE2YPR103W PAC10P48363 199 aa2.43□□□□□ -2.02
PRE2YPR103W ARL3Q02804 198 aa2.43□□□□□ -2.02
PRE2YPR103W UPS1Q05776 175 aa2.43□□□□□ -2.02
PRE2YPR103W NKP2Q06162 153 aa2.43□□□□□ -2.02
PRE2YPR103W YOR015WQ12169 119 aa2.43□□□□□ -2.02
PRE2YPR103W YOR381W-AQ3E804 55 aa2.43□□□□□ -2.02
PRE2YPR103W YHR213W-AQ8TGT4 77 aa2.43□□□□□ -2.02
PRE2YPR103W PTC1P35182 281 aa2.42□□□□□ -2.02
PRE2YPR103W CYC2P38909 366 aa2.42□□□□□ -2.02
PRE2YPR103W NSE4P43124 402 aa2.42□□□□□ -2.02
PRE2YPR103W YDC1Q02896 317 aa2.42□□□□□ -2.02
PRE2YPR103W PIR1Q03178 341 aa2.42□□□□□ -2.02
PRE2YPR103W CSN9Q03981 162 aa2.42□□□□□ -2.02
PRE2YPR103W ZEO1Q08245 113 aa2.42□□□□□ -2.02
PRE2YPR103W NSL1Q12143 216 aa2.42□□□□□ -2.02
PRE2YPR103W YOR214CQ12282 236 aa2.42□□□□□ -2.02
PRE2YPR103W GCN1P33892 2672 aaKnown RBP2.42□□□□□ -2.02
PRE2YPR103W BRR2P32639 2163 aaKnown RBP2.42□□□□□ -2.02
PRE2YPR103W VAR1P02381 398 aa2.41□□□□□ -2.02
PRE2YPR103W RPL43AP0CX25 92 aaKnown RBP2.41□□□□□ -2.02
PRE2YPR103W RPL43BP0CX26 92 aa2.41□□□□□ -2.02
PRE2YPR103W PHO13P19881 312 aa2.41□□□□□ -2.02
PRE2YPR103W YCL042WP25572 119 aa2.41□□□□□ -2.02
PRE2YPR103W AME1P38313 324 aa2.41□□□□□ -2.02
PRE2YPR103W YEL067CP39978 195 aa2.41□□□□□ -2.02
PRE2YPR103W LDB18Q07887 179 aa2.41□□□□□ -2.02
PRE2YPR103W QCR2P07257 368 aa2.4□□□□□ -2.03
PRE2YPR103W RPS1AP33442 255 aaKnown RBP2.4□□□□□ -2.03
PRE2YPR103W ETR1P38071 380 aa2.4□□□□□ -2.03
PRE2YPR103W YGR201CP42936 225 aa2.4□□□□□ -2.03
PRE2YPR103W YGR017WP53210 297 aa2.4□□□□□ -2.03
PRE2YPR103W SAE3P89114 91 aa2.4□□□□□ -2.03
PRE2YPR103W VPS28Q02767 242 aa2.4□□□□□ -2.03
PRE2YPR103W UPS3Q04006 179 aa2.4□□□□□ -2.03
PRE2YPR103W YHP1Q04116 353 aa2.4□□□□□ -2.03
PRE2YPR103W RIM9Q04734 239 aa2.4□□□□□ -2.03
PRE2YPR103W GTT2Q12390 233 aa2.4□□□□□ -2.03
PRE2YPR103W WIP1Q2V2P8 89 aa2.4□□□□□ -2.03
PRE2YPR103W EFG1Q3E705 233 aaKnown RBP2.4□□□□□ -2.03
PRE2YPR103W LHP1P33399 275 aaKnown RBP2.39□□□□□ -2.03
PRE2YPR103W MRPL15P36523 253 aa2.39□□□□□ -2.03
PRE2YPR103W YGL235WP53071 178 aa2.39□□□□□ -2.03
PRE2YPR103W ERV14P53173 138 aa2.39□□□□□ -2.03
PRE2YPR103W YCL001W-AP87012 153 aa2.39□□□□□ -2.03
PRE2YPR103W THI74Q04083 370 aa2.39□□□□□ -2.03
PRE2YPR103W DDP1Q99321 188 aaKnown RBP2.39□□□□□ -2.03
PRE2YPR103W PRP8P33334 2413 aaKnown RBP2.38□□□□□ -2.03
PRE2YPR103W YHR212W-AP0CX91 67 aa2.38□□□□□ -2.03
PRE2YPR103W MRPL44P19956 98 aa2.38□□□□□ -2.03
PRE2YPR103W PRE1P22141 198 aaKnown RBP2.38□□□□□ -2.03
PRE2YPR103W GNA1P43577 159 aaPredicted RBP2.38□□□□□ -2.03
PRE2YPR103W XPT1P47165 209 aa2.38□□□□□ -2.03
PRE2YPR103W DIE2P50076 525 aa2.38□□□□□ -2.03
PRE2YPR103W HHO1P53551 258 aa2.38□□□□□ -2.03
PRE2YPR103W YDR278CQ05612 105 aa2.38□□□□□ -2.03
PRE2YPR103W YLR053CQ12026 108 aa2.38□□□□□ -2.03
PRE2YPR103W COA3Q3E7B2 85 aa2.38□□□□□ -2.03
PRE2YPR103W PET20Q99373 253 aa2.38□□□□□ -2.03
PRE2YPR103W YOR304C-AO14468 76 aa2.37□□□□□ -2.03
PRE2YPR103W SEC59P20048 519 aa2.37□□□□□ -2.03
PRE2YPR103W YPT31P38555 223 aaKnown RBP2.37□□□□□ -2.03
PRE2YPR103W SMX2P40204 77 aaKnown RBP2.37□□□□□ -2.03
PRE2YPR103W NQM1P53228 333 aaPredicted RBP2.37□□□□□ -2.03
PRE2YPR103W DYN2Q02647 92 aa2.37□□□□□ -2.03
PRE2YPR103W ELP6Q04868 273 aa2.37□□□□□ -2.03
PRE2YPR103W FRQ1Q06389 190 aa2.37□□□□□ -2.03
PRE2YPR103W HRD1Q08109 551 aa2.37□□□□□ -2.03
PRE2YPR103W ATG41Q12048 136 aa2.37□□□□□ -2.03
PRE2YPR103W YBR056W-AI2HB52 66 aa2.36□□□□□ -2.03
PRE2YPR103W YFR010W-AP0C5N0 62 aa2.36□□□□□ -2.03
PRE2YPR103W SBH2P52871 88 aa2.36□□□□□ -2.03
PRE2YPR103W TVP18Q04767 167 aa2.36□□□□□ -2.03
PRE2YPR103W ATP14Q12349 124 aa2.36□□□□□ -2.03
PRE2YPR103W TAR1Q8TGM6 124 aa2.36□□□□□ -2.03
PRE2YPR103W HYM1P32464 399 aa2.35□□□□□ -2.03
PRE2YPR103W DER1P38307 211 aa2.35□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 43.8 ms