RNA–Protein interactions for RNA: YPL176C

TRE1, Transcript of Transferrin receptor-like protein, yeastyeast

Gene TRE1, Length 2,352 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRE1YPL176C YDR274CP87283 123 aa3.53□□□□□ -1.84
TRE1YPL176C SEN15Q04675 128 aa3.53□□□□□ -1.84
TRE1YPL176C RAD6P06104 172 aa3.53□□□□□ -1.84
TRE1YPL176C YGL010WP25338 174 aa3.53□□□□□ -1.84
TRE1YPL176C ERG25P53045 309 aa3.53□□□□□ -1.84
TRE1YPL176C YGL118CP53132 145 aa3.53□□□□□ -1.84
TRE1YPL176C YMR090WQ04304 227 aaKnown RBP3.53□□□□□ -1.84
TRE1YPL176C FIT1Q04433 528 aa3.53□□□□□ -1.84
TRE1YPL176C ATP20Q12233 115 aa3.53□□□□□ -1.84
TRE1YPL176C DFM1Q12743 341 aaKnown RBP3.53□□□□□ -1.84
TRE1YPL176C KSH1Q8TGJ3 72 aa3.53□□□□□ -1.84
TRE1YPL176C NUP192P47054 1683 aa3.53□□□□□ -1.84
TRE1YPL176C DUR1,2P32528 1835 aaKnown RBP3.52□□□□□ -1.85
TRE1YPL176C RPB9P27999 122 aa3.52□□□□□ -1.85
TRE1YPL176C YET1P35723 206 aa3.52□□□□□ -1.85
TRE1YPL176C TVP15Q03860 143 aa3.52□□□□□ -1.85
TRE1YPL176C ODC2Q99297 307 aa3.52□□□□□ -1.85
TRE1YPL176C TIM9O74700 87 aa3.52□□□□□ -1.85
TRE1YPL176C COX5BP00425 151 aa3.52□□□□□ -1.85
TRE1YPL176C RAS2P01120 322 aaKnown RBP3.52□□□□□ -1.85
TRE1YPL176C YCR099CP25657 155 aa3.52□□□□□ -1.85
TRE1YPL176C LSM2P38203 95 aaKnown RBP3.52□□□□□ -1.85
TRE1YPL176C YNL162W-AQ3E7A8 72 aa3.52□□□□□ -1.85
TRE1YPL176C APC1P53886 1748 aa3.52□□□□□ -1.85
TRE1YPL176C UBR1P19812 1950 aa3.51□□□□□ -1.85
TRE1YPL176C TOR1P35169 2470 aa3.51□□□□□ -1.85
TRE1YPL176C ASP1P38986 381 aaPredicted RBP3.51□□□□□ -1.85
TRE1YPL176C SCW4P53334 386 aaKnown RBP3.51□□□□□ -1.85
TRE1YPL176C YLR281CQ05863 155 aa3.51□□□□□ -1.85
TRE1YPL176C PIN3Q06449 215 aa3.51□□□□□ -1.85
TRE1YPL176C CUP1-1P0CX80 61 aa3.51□□□□□ -1.85
TRE1YPL176C CUP1-2P0CX81 61 aa3.51□□□□□ -1.85
TRE1YPL176C MDH2P22133 377 aa3.51□□□□□ -1.85
TRE1YPL176C MAK31P23059 88 aa3.51□□□□□ -1.85
TRE1YPL176C YHL042WP38729 150 aa3.51□□□□□ -1.85
TRE1YPL176C YOL029CQ08187 201 aa3.51□□□□□ -1.85
TRE1YPL176C FEX1Q08913 375 aa3.51□□□□□ -1.85
TRE1YPL176C FEX2Q08991 375 aa3.51□□□□□ -1.85
TRE1YPL176C SDH3P33421 198 aa3.5□□□□□ -1.85
TRE1YPL176C MRPL11P36521 249 aaPredicted RBP3.5□□□□□ -1.85
TRE1YPL176C YMR082CQ04276 118 aa3.5□□□□□ -1.85
TRE1YPL176C CSI2Q08054 341 aa3.5□□□□□ -1.85
TRE1YPL176C GPI18P38211 433 aa3.49□□□□□ -1.85
TRE1YPL176C CTR2P38865 189 aa3.49□□□□□ -1.85
TRE1YPL176C TIR3P40552 269 aa3.49□□□□□ -1.85
TRE1YPL176C YFR035CP43608 114 aa3.49□□□□□ -1.85
TRE1YPL176C YER078W-AQ3E7A2 54 aa3.49□□□□□ -1.85
TRE1YPL176C YBR013CP38215 129 aa3.49□□□□□ -1.85
TRE1YPL176C ARC15P40518 154 aaRIP-Chip data3.49□□□□□ -1.85not detected
TRE1YPL176C YNR064CP53750 290 aa3.49□□□□□ -1.85
TRE1YPL176C UPS3Q04006 179 aa3.49□□□□□ -1.85
TRE1YPL176C RRT7Q07829 113 aa3.49□□□□□ -1.85
TRE1YPL176C MIC10Q96VH5 97 aa3.49□□□□□ -1.85
TRE1YPL176C DAN1P47178 298 aa3.48□□□□□ -1.85
TRE1YPL176C SPG1P50088 95 aa3.48□□□□□ -1.85
TRE1YPL176C YCL021W-AQ96VH3 125 aa3.48□□□□□ -1.85
TRE1YPL176C POR1P04840 283 aaKnown RBP3.48□□□□□ -1.85
TRE1YPL176C YFR010W-AP0C5N0 62 aa3.48□□□□□ -1.85
TRE1YPL176C UBC4P15731 148 aa3.48□□□□□ -1.85
TRE1YPL176C RAF1Q06891 181 aa3.48□□□□□ -1.85
TRE1YPL176C YOS1Q3E834 85 aa3.48□□□□□ -1.85
TRE1YPL176C TY3B-IQ7LHG5 1498 aaKnown RBP3.48□□□□□ -1.85
TRE1YPL176C INO4P13902 151 aa3.47□□□□□ -1.85
TRE1YPL176C UMP1P38293 148 aa3.47□□□□□ -1.85
TRE1YPL176C SNF11P38956 169 aa3.47□□□□□ -1.85
TRE1YPL176C YIL054WP40524 105 aa3.47□□□□□ -1.85
TRE1YPL176C DSK2P48510 373 aa3.47□□□□□ -1.85
TRE1YPL176C HAL1Q01766 294 aa3.47□□□□□ -1.85
TRE1YPL176C MRPS8Q03799 155 aa3.47□□□□□ -1.85
TRE1YPL176C SCS22Q6Q595 175 aa3.47□□□□□ -1.85
TRE1YPL176C ECM12O13529 151 aa3.47□□□□□ -1.85
TRE1YPL176C RRT1P38192 103 aa3.47□□□□□ -1.85
TRE1YPL176C YHR125WP38831 101 aa3.47□□□□□ -1.85
TRE1YPL176C MSL1P40567 111 aaPredicted RBP3.47□□□□□ -1.85
TRE1YPL176C MPC3P53311 146 aa3.47□□□□□ -1.85
TRE1YPL176C YAL067W-AQ8TGK6 75 aa3.47□□□□□ -1.85
TRE1YPL176C YHR213W-AQ8TGT4 77 aa3.47□□□□□ -1.85
TRE1YPL176C YOL162WP0CF19 215 aa3.46□□□□□ -1.86
TRE1YPL176C YKL044WP36092 106 aa3.46□□□□□ -1.86
TRE1YPL176C MIG3P39943 394 aa3.46□□□□□ -1.86
TRE1YPL176C CWP2P43497 92 aa3.46□□□□□ -1.86
TRE1YPL176C KNH1P50112 268 aa3.46□□□□□ -1.86
TRE1YPL176C YML122CQ03207 126 aa3.46□□□□□ -1.86
TRE1YPL176C YOR385WQ08909 290 aa3.46□□□□□ -1.86
TRE1YPL176C TVP23P38962 199 aa3.46□□□□□ -1.86
TRE1YPL176C YEL073CP39974 107 aa3.46□□□□□ -1.86
TRE1YPL176C TDA2P40045 126 aa3.46□□□□□ -1.86
TRE1YPL176C FLX1P40464 311 aa3.46□□□□□ -1.86
TRE1YPL176C EMC5P40540 141 aa3.46□□□□□ -1.86
TRE1YPL176C IGD1P43598 195 aa3.46□□□□□ -1.86
TRE1YPL176C PIR5P46999 287 aa3.46□□□□□ -1.86
TRE1YPL176C RIM9Q04734 239 aa3.46□□□□□ -1.86
TRE1YPL176C IRC25Q07951 179 aa3.46□□□□□ -1.86
TRE1YPL176C YLR365WQ7LIF2 110 aa3.46□□□□□ -1.86
TRE1YPL176C SWD3P38123 315 aa3.45□□□□□ -1.86
TRE1YPL176C PTH1P38876 190 aaKnown RBP3.45□□□□□ -1.86
TRE1YPL176C LIP1Q03579 150 aa3.45□□□□□ -1.86
TRE1YPL176C SRL1Q08673 210 aa3.45□□□□□ -1.86
TRE1YPL176C TY4B-HP0C2J7 1802 aa3.45□□□□□ -1.86
TRE1YPL176C TY4B-JP47024 1803 aa3.45□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 42.4 ms