RNA–Protein interactions for RNA: YOL112W

MSB4, Transcript of GTPase-activating protein of the Ras superfamily, yeast

Gene MSB4, Length 1,479 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MSB4	YOL112W	RPL2B	P0CX46	254 aa	Known RBP	7.06	□□□□□ -1.28
MSB4	YOL112W	RPS11A	P0CX47	156 aa	Known RBP	7.06	□□□□□ -1.28
MSB4	YOL112W	RPS11B	P0CX48	156 aa	Known RBP	7.06	□□□□□ -1.28
MSB4	YOL112W	YGL185C	P53100	379 aa		7.06	□□□□□ -1.28
MSB4	YOL112W	FMP49	A0A023PZB3	126 aa		7.05	□□□□□ -1.28
MSB4	YOL112W	VAR1	P02381	398 aa		7.05	□□□□□ -1.28
MSB4	YOL112W	TIR1	P10863	254 aa		7.05	□□□□□ -1.28
MSB4	YOL112W	POF1	P25576	258 aa		7.05	□□□□□ -1.28
MSB4	YOL112W	PGD1	P40356	397 aa		7.05	□□□□□ -1.28
MSB4	YOL112W	YFR045W	P43617	309 aa		7.05	□□□□□ -1.28
MSB4	YOL112W	ORM2	Q06144	216 aa		7.05	□□□□□ -1.28
MSB4	YOL112W	YOR105W	Q08504	108 aa		7.05	□□□□□ -1.28
MSB4	YOL112W	SMT3	Q12306	101 aa	Known RBP	7.05	□□□□□ -1.28
MSB4	YOL112W	YCL001W-B	Q96VH2	84 aa		7.05	□□□□□ -1.28
MSB4	YOL112W	MRPL4	P36517	319 aa		7.04	□□□□□ -1.28
MSB4	YOL112W	MRPS9	P38120	278 aa		7.04	□□□□□ -1.28
MSB4	YOL112W	SAP30	P38429	201 aa		7.04	□□□□□ -1.28
MSB4	YOL112W	YDL183C	P48569	320 aa		7.04	□□□□□ -1.28
MSB4	YOL112W	DCN1	Q12395	269 aa		7.04	□□□□□ -1.28
MSB4	YOL112W	CYC7	P00045	113 aa		7.04	□□□□□ -1.28
MSB4	YOL112W	TY1A-LR4	P0C2I8	440 aa	Known RBP	7.04	□□□□□ -1.28
MSB4	YOL112W	TY1A-DR6	P0CX70	440 aa		7.04	□□□□□ -1.28
MSB4	YOL112W	TY1A-ER1	P0CX71	440 aa		7.04	□□□□□ -1.28
MSB4	YOL112W	TY1A-LR2	P0CX72	440 aa		7.04	□□□□□ -1.28
MSB4	YOL112W	TY1A-PL	P0CX73	440 aa		7.04	□□□□□ -1.28
MSB4	YOL112W	TY1A-JR1	P0CX74	440 aa		7.04	□□□□□ -1.28
MSB4	YOL112W	TY1A-LR3	P0CX75	440 aa		7.04	□□□□□ -1.28
MSB4	YOL112W	TY1A-ML2	P0CX76	440 aa		7.04	□□□□□ -1.28
MSB4	YOL112W	CNB1	P25296	175 aa		7.04	□□□□□ -1.28
MSB4	YOL112W	TY1A-GR1	Q12085	440 aa		7.04	□□□□□ -1.28
MSB4	YOL112W	TY1A-PR3	Q6Q5H1	440 aa	Known RBP	7.04	□□□□□ -1.28
MSB4	YOL112W	TY1A-OL	Q92392	440 aa	Known RBP	7.04	□□□□□ -1.28
MSB4	YOL112W	VMA16	P23968	213 aa		7.03	□□□□□ -1.28
MSB4	YOL112W	YCR001W	P25347	104 aa		7.03	□□□□□ -1.28
MSB4	YOL112W	TIM21	P53220	239 aa		7.03	□□□□□ -1.28
MSB4	YOL112W	ADH3	P07246	375 aa	Known RBP	7.02	□□□□□ -1.29
MSB4	YOL112W	QRI5	P32344	111 aa		7.02	□□□□□ -1.29
MSB4	YOL112W	VHS2	P40463	436 aa		7.02	□□□□□ -1.29
MSB4	YOL112W	UTP23	Q12339	254 aa	Known RBP	7.02	□□□□□ -1.29
MSB4	YOL112W	TY1A-H	P0C2I4	478 aa	Known RBP	7.01	□□□□□ -1.29
MSB4	YOL112W	VMA21	P41806	77 aa		7.01	□□□□□ -1.29
MSB4	YOL112W	YDR215C	Q12240	137 aa		7.01	□□□□□ -1.29
MSB4	YOL112W	YLR118C	Q12354	227 aa		7.01	□□□□□ -1.29
MSB4	YOL112W	Q0255	P03881	472 aa		7	□□□□□ -1.29
MSB4	YOL112W	MRPL31	P14063	131 aa	Predicted RBP	7	□□□□□ -1.29
MSB4	YOL112W	YGL010W	P25338	174 aa		7	□□□□□ -1.29
MSB4	YOL112W	AGA1	P32323	725 aa		7	□□□□□ -1.29
MSB4	YOL112W	ATG8	P38182	117 aa	RIP-Chip data	7	□□□□□ -1.29	not detected
MSB4	YOL112W	TIM22	Q12328	207 aa		7	□□□□□ -1.29
MSB4	YOL112W	CUP2	P15315	225 aa		6.99	□□□□□ -1.29
MSB4	YOL112W	MOG1	P47123	218 aa		6.99	□□□□□ -1.29
MSB4	YOL112W	GIM5	Q04493	163 aa		6.99	□□□□□ -1.29
MSB4	YOL112W	TMA17	Q12513	150 aa		6.99	□□□□□ -1.29
MSB4	YOL112W	RPL16B	P26785	198 aa	Known RBP	6.98	□□□□□ -1.29
MSB4	YOL112W	MIX23	P38162	196 aa		6.98	□□□□□ -1.29
MSB4	YOL112W	RPB11	P38902	120 aa		6.98	□□□□□ -1.29
MSB4	YOL112W	HSP10	P38910	106 aa		6.98	□□□□□ -1.29
MSB4	YOL112W	KEG1	P43614	200 aa		6.98	□□□□□ -1.29
MSB4	YOL112W	YGR017W	P53210	297 aa		6.98	□□□□□ -1.29
MSB4	YOL112W	VAM10	Q08474	114 aa		6.98	□□□□□ -1.29
MSB4	YOL112W	YBR200W-A	Q3E755	54 aa		6.98	□□□□□ -1.29
MSB4	YOL112W	RPL12A	P0CX53	165 aa	Known RBP	6.98	□□□□□ -1.29
MSB4	YOL112W	RPL12B	P0CX54	165 aa		6.98	□□□□□ -1.29
MSB4	YOL112W	RRT13	P40042	185 aa		6.98	□□□□□ -1.29
MSB4	YOL112W	YGR026W	P53217	278 aa		6.98	□□□□□ -1.29
MSB4	YOL112W	UPS3	Q04006	179 aa		6.98	□□□□□ -1.29
MSB4	YOL112W	YOP1	Q12402	180 aa		6.98	□□□□□ -1.29
MSB4	YOL112W	NHP6A	P11632	93 aa	Known RBP	6.97	□□□□□ -1.29
MSB4	YOL112W	PAM17	P36147	197 aa		6.97	□□□□□ -1.29
MSB4	YOL112W	COX16	P47081	118 aa		6.97	□□□□□ -1.29
MSB4	YOL112W	DAN1	P47178	298 aa		6.97	□□□□□ -1.29
MSB4	YOL112W	DIA1	P54005	336 aa		6.97	□□□□□ -1.29
MSB4	YOL112W	APS2	Q00381	147 aa		6.97	□□□□□ -1.29
MSB4	YOL112W	HAL1	Q01766	294 aa		6.97	□□□□□ -1.29
MSB4	YOL112W	PAU15	P40585	124 aa		6.96	□□□□□ -1.3
MSB4	YOL112W	MGA1	P53050	456 aa		6.96	□□□□□ -1.3
MSB4	YOL112W	YPS5	P53057	165 aa		6.96	□□□□□ -1.3
MSB4	YOL112W	BRP1	P53194	125 aa		6.96	□□□□□ -1.3
MSB4	YOL112W	YDR366C	P87287	132 aa		6.96	□□□□□ -1.3
MSB4	YOL112W	SGF11	Q03067	99 aa		6.96	□□□□□ -1.3
MSB4	YOL112W	YNR034W-A	Q3E841	98 aa		6.96	□□□□□ -1.3
MSB4	YOL112W	CSM4	Q08955	156 aa		6.95	□□□□□ -1.3
MSB4	YOL112W	YPR053C	Q6Q5F3	151 aa		6.95	□□□□□ -1.3
MSB4	YOL112W	HMRA1	P0CY11	126 aa		6.94	□□□□□ -1.3
MSB4	YOL112W	DAD2	P36162	133 aa		6.94	□□□□□ -1.3
MSB4	YOL112W	THG1	P53215	237 aa	Known RBP	6.93	□□□□□ -1.3
MSB4	YOL112W	AIM34	Q03673	198 aa		6.93	□□□□□ -1.3
MSB4	YOL112W	YCR075W-A	Q3E830	75 aa		6.93	□□□□□ -1.3
MSB4	YOL112W	ARC18	Q05933	178 aa	Known RBP	6.92	□□□□□ -1.3
MSB4	YOL112W	SNU23	Q12368	194 aa	Predicted RBP	6.92	□□□□□ -1.3
MSB4	YOL112W	PAU5	P43575	122 aa		6.92	□□□□□ -1.3
MSB4	YOL112W	YBR013C	P38215	129 aa		6.91	□□□□□ -1.3
MSB4	YOL112W	YHR140W	P38842	239 aa		6.91	□□□□□ -1.3
MSB4	YOL112W	YCH1	P42937	148 aa		6.91	□□□□□ -1.3
MSB4	YOL112W	NSE4	P43124	402 aa		6.91	□□□□□ -1.3
MSB4	YOL112W	GPI19	Q04082	140 aa		6.91	□□□□□ -1.3
MSB4	YOL112W	DXO1	Q06349	442 aa		6.91	□□□□□ -1.3
MSB4	YOL112W	YBR126W-A	Q8TGU7	68 aa		6.91	□□□□□ -1.3
MSB4	YOL112W	ZRT1	P32804	376 aa		6.9	□□□□□ -1.31
MSB4	YOL112W	PAU7	P39545	55 aa		6.9	□□□□□ -1.31

Retrieved 100 of 5,963 RNA–protein pairs in 27.5 ms