RNA–Protein interactions for RNA: YLR086W

SMC4, Transcript of Subunit of the condensin complex, yeast

Gene SMC4, Length 4,257 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SMC4	YLR086W	RPS25B	P0C0T4	108 aa	Known RBP	1.01	□□□□□ -2.25
SMC4	YLR086W	HMRA1	P0CY11	126 aa		1.01	□□□□□ -2.25
SMC4	YLR086W	SPT14	P32363	452 aa		1.01	□□□□□ -2.25
SMC4	YLR086W	AST2	P39945	430 aa	Known RBP	1.01	□□□□□ -2.25
SMC4	YLR086W	PKR1	Q03880	122 aa	Known RBP	1.01	□□□□□ -2.25
SMC4	YLR086W	ELP6	Q04868	273 aa		1.01	□□□□□ -2.25
SMC4	YLR086W	CDD1	Q06549	142 aa		1.01	□□□□□ -2.25
SMC4	YLR086W	YGL258W-A	Q3E740	77 aa		1.01	□□□□□ -2.25
SMC4	YLR086W	RPS25A	Q3E792	108 aa	Predicted RBP	1.01	□□□□□ -2.25
SMC4	YLR086W	LAA1	P39526	2014 aa		1	□□□□□ -2.25
SMC4	YLR086W	QCR2	P07257	368 aa		1	□□□□□ -2.25
SMC4	YLR086W	MDH2	P22133	377 aa		1	□□□□□ -2.25
SMC4	YLR086W	MRS4	P23500	304 aa		1	□□□□□ -2.25
SMC4	YLR086W	TIM12	P32830	109 aa		1	□□□□□ -2.25
SMC4	YLR086W	YER135C	P40082	130 aa		1	□□□□□ -2.25
SMC4	YLR086W	YIL086C	P40503	102 aa		1	□□□□□ -2.25
SMC4	YLR086W	NSE4	P43124	402 aa		1	□□□□□ -2.25
SMC4	YLR086W	MET31	Q03081	177 aa		1	□□□□□ -2.25
SMC4	YLR086W	GIM5	Q04493	163 aa		1	□□□□□ -2.25
SMC4	YLR086W	YOR105W	Q08504	108 aa		1	□□□□□ -2.25
SMC4	YLR086W	YRA1	Q12159	226 aa	Known RBP	1	□□□□□ -2.25
SMC4	YLR086W	MPD1	Q12404	318 aa	Known RBP	1	□□□□□ -2.25
SMC4	YLR086W	YLR412C-A	Q3E742	68 aa		1	□□□□□ -2.25
SMC4	YLR086W	YMR030W-A	Q3E760	96 aa		1	□□□□□ -2.25
SMC4	YLR086W	TDA8	Q6B2U8	126 aa		1	□□□□□ -2.25
SMC4	YLR086W	ADK1	P07170	222 aa	Known RBP	1	□□□□□ -2.25
SMC4	YLR086W	UBI4	P0CG63	381 aa	Known RBP	1	□□□□□ -2.25
SMC4	YLR086W	RPL40A	P0CH08	128 aa	Known RBP	1	□□□□□ -2.25
SMC4	YLR086W	RPL40B	P0CH09	128 aa	Known RBP	1	□□□□□ -2.25
SMC4	YLR086W	SPS18	P32572	300 aa		1	□□□□□ -2.25
SMC4	YLR086W	SRL3	P36167	246 aa		1	□□□□□ -2.25
SMC4	YLR086W	RRT1	P38192	103 aa		1	□□□□□ -2.25
SMC4	YLR086W	SEC72	P39742	193 aa	Known RBP	1	□□□□□ -2.25
SMC4	YLR086W	GTT1	P40582	234 aa		1	□□□□□ -2.25
SMC4	YLR086W	TTI2	P47168	421 aa		1	□□□□□ -2.25
SMC4	YLR086W	ATG10	Q07879	167 aa		1	□□□□□ -2.25
SMC4	YLR086W	BOL1	Q3E793	110 aa		1	□□□□□ -2.25
SMC4	YLR086W	CCW14	O13547	238 aa		1	□□□□□ -2.25
SMC4	YLR086W	ATP15	P21306	62 aa		1	□□□□□ -2.25
SMC4	YLR086W	EMP24	P32803	203 aa	Known RBP	1	□□□□□ -2.25
SMC4	YLR086W	PAU24	P38155	120 aa		1	□□□□□ -2.25
SMC4	YLR086W	SLM6	P38343	150 aa		1	□□□□□ -2.25
SMC4	YLR086W	PAU7	P39545	55 aa		1	□□□□□ -2.25
SMC4	YLR086W	YEA4	P40004	342 aa		1	□□□□□ -2.25
SMC4	YLR086W	TIR3	P40552	269 aa		1	□□□□□ -2.25
SMC4	YLR086W	PAU5	P43575	122 aa		1	□□□□□ -2.25
SMC4	YLR086W	GPI14	P47088	403 aa	Known RBP	1	□□□□□ -2.25
SMC4	YLR086W	DSK2	P48510	373 aa		1	□□□□□ -2.25
SMC4	YLR086W	MPA43	P53583	542 aa	Predicted RBP	1	□□□□□ -2.25
SMC4	YLR086W	POP3	P53833	195 aa	Predicted RBP	1	□□□□□ -2.25
SMC4	YLR086W	RCE1	Q03530	315 aa		1	□□□□□ -2.25
SMC4	YLR086W	MRPS8	Q03799	155 aa		1	□□□□□ -2.25
SMC4	YLR086W	RNH202	Q05635	350 aa		1	□□□□□ -2.25
SMC4	YLR086W	SPC3	Q12133	184 aa		1	□□□□□ -2.25
SMC4	YLR086W	RDI1	Q12434	202 aa		1	□□□□□ -2.25
SMC4	YLR086W	YBR209W	P38311	105 aa		0.99	□□□□□ -2.25
SMC4	YLR086W	SNF11	P38956	169 aa		0.99	□□□□□ -2.25
SMC4	YLR086W	VMA7	P39111	118 aa		0.99	□□□□□ -2.25
SMC4	YLR086W	YER134C	P40081	178 aa		0.99	□□□□□ -2.25
SMC4	YLR086W	ARP3	P47117	449 aa	Known RBP	0.99	□□□□□ -2.25
SMC4	YLR086W	TVP18	Q04767	167 aa		0.99	□□□□□ -2.25
SMC4	YLR086W	COA3	Q3E7B2	85 aa		0.99	□□□□□ -2.25
SMC4	YLR086W	YLR365W	Q7LIF2	110 aa		0.99	□□□□□ -2.25
SMC4	YLR086W	YNL200C	P40165	246 aa	Known RBP	0.99	□□□□□ -2.25
SMC4	YLR086W	AGE2	P40529	298 aa		0.99	□□□□□ -2.25
SMC4	YLR086W	YFR054C	P43622	192 aa		0.99	□□□□□ -2.25
SMC4	YLR086W	GPI2	P46961	280 aa		0.99	□□□□□ -2.25
SMC4	YLR086W	TMA23	Q03525	211 aa		0.99	□□□□□ -2.25
SMC4	YLR086W	MBF1	O14467	151 aa	Known RBP	0.99	□□□□□ -2.25
SMC4	YLR086W	ATP5	P09457	212 aa		0.99	□□□□□ -2.25
SMC4	YLR086W	CKS1	P20486	150 aa	Known RBP	0.99	□□□□□ -2.25
SMC4	YLR086W	MRP49	P32388	137 aa		0.99	□□□□□ -2.25
SMC4	YLR086W	FYV4	P38783	130 aa	Predicted RBP	0.99	□□□□□ -2.25
SMC4	YLR086W	LSM4	P40070	187 aa	Known RBP	0.99	□□□□□ -2.25
SMC4	YLR086W	YER121W	P40076	114 aa		0.99	□□□□□ -2.25
SMC4	YLR086W	RPL33B	P41056	107 aa	Known RBP	0.99	□□□□□ -2.25
SMC4	YLR086W	YLR342W-A	Q3E810	57 aa		0.99	□□□□□ -2.25
SMC4	YLR086W	TIM9	O74700	87 aa		0.98	□□□□□ -2.25
SMC4	YLR086W	YHR032W-A	P0C5N6	59 aa		0.98	□□□□□ -2.25
SMC4	YLR086W	YBR220C	P38318	560 aa		0.98	□□□□□ -2.25
SMC4	YLR086W	GCV3	P39726	170 aa	Predicted RBP	0.98	□□□□□ -2.25
SMC4	YLR086W	EMC5	P40540	141 aa		0.98	□□□□□ -2.25
SMC4	YLR086W	BUD25	P85052	153 aa		0.98	□□□□□ -2.25
SMC4	YLR086W	NMA1	Q06178	401 aa	Known RBP	0.98	□□□□□ -2.25
SMC4	YLR086W	YLR146W-A	Q2V2P1	62 aa		0.98	□□□□□ -2.25
SMC4	YLR086W	YLR099W-A	Q3E798	87 aa		0.98	□□□□□ -2.25
SMC4	YLR086W	PAU19	P0CE85	124 aa		0.98	□□□□□ -2.25
SMC4	YLR086W	PAU21	P0CE86	164 aa		0.98	□□□□□ -2.25
SMC4	YLR086W	PAU22	P0CE87	164 aa		0.98	□□□□□ -2.25
SMC4	YLR086W	TIR1	P10863	254 aa		0.98	□□□□□ -2.25
SMC4	YLR086W	PAU3	P25610	124 aa		0.98	□□□□□ -2.25
SMC4	YLR086W	DSE2	P38844	325 aa		0.98	□□□□□ -2.25
SMC4	YLR086W	HPA3	P39979	161 aa		0.98	□□□□□ -2.25
SMC4	YLR086W	GLE2	P40066	365 aa		0.98	□□□□□ -2.25
SMC4	YLR086W	PAU15	P40585	124 aa		0.98	□□□□□ -2.25
SMC4	YLR086W	YJL218W	P40892	196 aa	Known RBP	0.98	□□□□□ -2.25
SMC4	YLR086W	GLR1	P41921	483 aa	Known RBP	0.98	□□□□□ -2.25
SMC4	YLR086W	SFT1	P43682	97 aa		0.98	□□□□□ -2.25
SMC4	YLR086W	FCY1	Q12178	158 aa		0.98	□□□□□ -2.25
SMC4	YLR086W	YKR041W	P36134	250 aa		0.98	□□□□□ -2.25

Retrieved 100 of 5,963 RNA–protein pairs in 10.6 ms