RNA–Protein interactions for RNA: YLR039C

RIC1, Transcript of Protein involved in retrograde transport to the cis-Golgi network, yeast

Gene RIC1, Length 3,171 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RIC1	YLR039C	EFM5	P53200	248 aa	Known RBP	1.02	□□□□□ -2.25
RIC1	YLR039C	YHR007C-A	Q07074	71 aa		1.02	□□□□□ -2.25
RIC1	YLR039C	YHL037C	P38733	133 aa		1.02	□□□□□ -2.25
RIC1	YLR039C	LSM3	P57743	89 aa	Known RBP	1.02	□□□□□ -2.25
RIC1	YLR039C	DML1	Q03652	475 aa		1.02	□□□□□ -2.25
RIC1	YLR039C	YDR391C	Q04170	232 aa		1.02	□□□□□ -2.25
RIC1	YLR039C	SYM1	Q06563	197 aa		1.02	□□□□□ -2.25
RIC1	YLR039C	RPL30	P14120	105 aa	Known RBP	1.02	□□□□□ -2.25
RIC1	YLR039C	NSE4	P43124	402 aa		1.02	□□□□□ -2.25
RIC1	YLR039C	TMA20	P89886	181 aa	Predicted RBP	1.02	□□□□□ -2.25
RIC1	YLR039C	ELP6	Q04868	273 aa		1.02	□□□□□ -2.25
RIC1	YLR039C	ATG41	Q12048	136 aa		1.02	□□□□□ -2.25
RIC1	YLR039C	SEC16	P48415	2195 aa	Known RBP	1.01	□□□□□ -2.25
RIC1	YLR039C	SUI1	P32911	108 aa	Known RBP	1.01	□□□□□ -2.25
RIC1	YLR039C	RIO2	P40160	425 aa	Known RBP	1.01	□□□□□ -2.25
RIC1	YLR039C	FLX1	P40464	311 aa		1.01	□□□□□ -2.25
RIC1	YLR039C	FIP1	P45976	327 aa		1.01	□□□□□ -2.25
RIC1	YLR039C	XPT1	P47165	209 aa		1.01	□□□□□ -2.25
RIC1	YLR039C	TIM13	P53299	105 aa		1.01	□□□□□ -2.25
RIC1	YLR039C	YMR252C	Q04814	134 aa		1.01	□□□□□ -2.25
RIC1	YLR039C	YNL146C-A	Q3E7Z1	64 aa		1.01	□□□□□ -2.25
RIC1	YLR039C	RAD6	P06104	172 aa		1.01	□□□□□ -2.25
RIC1	YLR039C	RPB7	P34087	171 aa		1.01	□□□□□ -2.25
RIC1	YLR039C	PTC1	P35182	281 aa		1.01	□□□□□ -2.25
RIC1	YLR039C	SFK1	P35735	353 aa		1.01	□□□□□ -2.25
RIC1	YLR039C	ALB1	P47019	175 aa	Predicted RBP	1.01	□□□□□ -2.25
RIC1	YLR039C	YHP1	Q04116	353 aa		1.01	□□□□□ -2.25
RIC1	YLR039C	ATP5	P09457	212 aa		1	□□□□□ -2.25
RIC1	YLR039C	AQY2	P0CD90	149 aa		1	□□□□□ -2.25
RIC1	YLR039C	UBC8	P28263	218 aa		1	□□□□□ -2.25
RIC1	YLR039C	NQM1	P53228	333 aa	Predicted RBP	1	□□□□□ -2.25
RIC1	YLR039C	MAK3	Q03503	176 aa		1	□□□□□ -2.25
RIC1	YLR039C	UPS3	Q04006	179 aa		1	□□□□□ -2.25
RIC1	YLR039C	RRP17	Q04031	235 aa	Predicted RBP	1	□□□□□ -2.25
RIC1	YLR039C	STF2	P16965	84 aa		1	□□□□□ -2.25
RIC1	YLR039C	YEL067C	P39978	195 aa		1	□□□□□ -2.25
RIC1	YLR039C	APQ12	P40532	138 aa		1	□□□□□ -2.25
RIC1	YLR039C	YAE1	P47118	141 aa	Predicted RBP	1	□□□□□ -2.25
RIC1	YLR039C	CCC1	P47818	322 aa		1	□□□□□ -2.25
RIC1	YLR039C	SWC7	Q06707	132 aa		1	□□□□□ -2.25
RIC1	YLR039C	TOM1	Q03280	3268 aa		1	□□□□□ -2.25
RIC1	YLR039C	YCL042W	P25572	119 aa		1	□□□□□ -2.25
RIC1	YLR039C	BUB2	P26448	306 aa	Predicted RBP	1	□□□□□ -2.25
RIC1	YLR039C	HPA3	P39979	161 aa		1	□□□□□ -2.25
RIC1	YLR039C	YDR476C	Q03362	224 aa		1	□□□□□ -2.25
RIC1	YLR039C	YDL241W	Q07738	123 aa		1	□□□□□ -2.25
RIC1	YLR039C	OCA6	Q12454	224 aa		1	□□□□□ -2.25
RIC1	YLR039C	MHF1	Q3E835	90 aa		1	□□□□□ -2.25
RIC1	YLR039C	NUF2	P33895	451 aa		0.99	□□□□□ -2.25
RIC1	YLR039C	RPS12	P48589	143 aa	Known RBP	0.99	□□□□□ -2.25
RIC1	YLR039C	UBC7	Q02159	165 aa		0.99	□□□□□ -2.25
RIC1	YLR039C	YDC1	Q02896	317 aa		0.99	□□□□□ -2.25
RIC1	YLR039C	BRR2	P32639	2163 aa	Known RBP	0.99	□□□□□ -2.25
RIC1	YLR039C	ACP1	P32463	125 aa		0.99	□□□□□ -2.25
RIC1	YLR039C	YJL218W	P40892	196 aa	Known RBP	0.99	□□□□□ -2.25
RIC1	YLR039C	YDR102C	Q03864	110 aa		0.99	□□□□□ -2.25
RIC1	YLR039C	PET54	P10834	293 aa		0.98	□□□□□ -2.25
RIC1	YLR039C	SEN2	P16658	377 aa		0.98	□□□□□ -2.25
RIC1	YLR039C	CCS1	P40202	249 aa	Known RBP	0.98	□□□□□ -2.25
RIC1	YLR039C	YGL193C	P53097	103 aa		0.98	□□□□□ -2.25
RIC1	YLR039C	HHT1	P61830	136 aa		0.98	□□□□□ -2.25
RIC1	YLR039C	AVO2	Q04749	426 aa		0.98	□□□□□ -2.25
RIC1	YLR039C	HTD2	P38790	280 aa	Known RBP	0.98	□□□□□ -2.25
RIC1	YLR039C	DLS1	P40366	167 aa		0.98	□□□□□ -2.25
RIC1	YLR039C	CWC27	Q02770	301 aa		0.98	□□□□□ -2.25
RIC1	YLR039C	RCE1	Q03530	315 aa		0.98	□□□□□ -2.25
RIC1	YLR039C	LIP1	Q03579	150 aa		0.98	□□□□□ -2.25
RIC1	YLR039C	MRS4	P23500	304 aa		0.98	□□□□□ -2.25
RIC1	YLR039C	SPT14	P32363	452 aa		0.98	□□□□□ -2.25
RIC1	YLR039C	DYN1	P36022	4092 aa		0.97	□□□□□ -2.25
RIC1	YLR039C	ETR1	P38071	380 aa		0.97	□□□□□ -2.25
RIC1	YLR039C	YFL065C	P43539	102 aa		0.97	□□□□□ -2.25
RIC1	YLR039C	TAR1	Q8TGM6	124 aa		0.97	□□□□□ -2.25
RIC1	YLR039C	YCR101C	P25607	182 aa		0.97	□□□□□ -2.25
RIC1	YLR039C	PRS3	P38689	320 aa	Known RBP	0.97	□□□□□ -2.25
RIC1	YLR039C	SOK1	P40317	901 aa		0.97	□□□□□ -2.25
RIC1	YLR039C	PAC10	P48363	199 aa		0.97	□□□□□ -2.25
RIC1	YLR039C	FMN1	Q03778	218 aa		0.97	□□□□□ -2.25
RIC1	YLR039C	RFU1	Q08003	200 aa		0.97	□□□□□ -2.25
RIC1	YLR039C	COX9	P07255	59 aa		0.96	□□□□□ -2.26
RIC1	YLR039C	YHR214C-D	P0CX93	97 aa		0.96	□□□□□ -2.26
RIC1	YLR039C	YHL042W	P38729	150 aa		0.96	□□□□□ -2.26
RIC1	YLR039C	ATG10	Q07879	167 aa		0.96	□□□□□ -2.26
RIC1	YLR039C	YHR212W-A	P0CX91	67 aa		0.96	□□□□□ -2.26
RIC1	YLR039C	YRA2	P36036	203 aa	Known RBP RIP-Chip data	0.96	□□□□□ -2.26	not detected
RIC1	YLR039C	YPT31	P38555	223 aa	Known RBP	0.96	□□□□□ -2.26
RIC1	YLR039C	LSM1	P47017	172 aa	Known RBP	0.96	□□□□□ -2.26
RIC1	YLR039C	YNR064C	P53750	290 aa		0.96	□□□□□ -2.26
RIC1	YLR039C	NCE101	Q02820	53 aa		0.96	□□□□□ -2.26
RIC1	YLR039C	MET31	Q03081	177 aa		0.96	□□□□□ -2.26
RIC1	YLR039C	COA3	Q3E7B2	85 aa		0.96	□□□□□ -2.26
RIC1	YLR039C	INO4	P13902	151 aa		0.96	□□□□□ -2.26
RIC1	YLR039C	RPS1B	P23248	255 aa	Known RBP	0.96	□□□□□ -2.26
RIC1	YLR039C	YER181C	P40097	107 aa		0.96	□□□□□ -2.26
RIC1	YLR039C	TAO3	P40468	2376 aa		0.95	□□□□□ -2.26
RIC1	YLR039C	YBL010C	P32788	280 aa		0.95	□□□□□ -2.26
RIC1	YLR039C	IPI1	P38803	334 aa	Predicted RBP	0.95	□□□□□ -2.26
RIC1	YLR039C	YJR015W	P47090	510 aa		0.95	□□□□□ -2.26
RIC1	YLR039C	MHF2	Q3E829	80 aa		0.95	□□□□□ -2.26
RIC1	YLR039C	PBI2	P0CT04	75 aa	Known RBP	0.95	□□□□□ -2.26

Retrieved 100 of 5,963 RNA–protein pairs in 33.8 ms