RNA–Protein interactions for RNA: YKL195W

MIA40, Transcript of Mitochondrial oxidoreductase, yeast

Gene MIA40, Length 1,212 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MIA40	YKL195W	SEC72	P39742	193 aa	Known RBP	5.19	□□□□□ -1.58
MIA40	YKL195W	YER134C	P40081	178 aa		5.19	□□□□□ -1.58
MIA40	YKL195W	WWM1	P43582	211 aa	Known RBP	5.19	□□□□□ -1.58
MIA40	YKL195W	RPA43	P46669	326 aa		5.19	□□□□□ -1.58
MIA40	YKL195W	IMP2	P46972	177 aa		5.19	□□□□□ -1.58
MIA40	YKL195W	IZH1	Q03419	316 aa		5.19	□□□□□ -1.58
MIA40	YKL195W	YMR317W	Q04893	1140 aa		5.19	□□□□□ -1.58
MIA40	YKL195W	TIM18	Q08749	192 aa		5.19	□□□□□ -1.58
MIA40	YKL195W	FYV7	Q12247	151 aa		5.19	□□□□□ -1.58
MIA40	YKL195W	SEC4	P07560	215 aa	Known RBP	5.18	□□□□□ -1.58
MIA40	YKL195W	RPL23A	P0CX41	137 aa	Known RBP	5.18	□□□□□ -1.58
MIA40	YKL195W	RPL23B	P0CX42	137 aa	Known RBP	5.18	□□□□□ -1.58
MIA40	YKL195W	PRS4	P38063	326 aa	Predicted RBP	5.18	□□□□□ -1.58
MIA40	YKL195W	YMR141C	P40211	102 aa		5.18	□□□□□ -1.58
MIA40	YKL195W	POR2	P40478	281 aa		5.18	□□□□□ -1.58
MIA40	YKL195W	YJL027C	P47063	138 aa	Predicted RBP	5.18	□□□□□ -1.58
MIA40	YKL195W	TEL1	P38110	2787 aa		5.17	□□□□□ -1.58
MIA40	YKL195W	DIF1	O13577	133 aa		5.17	□□□□□ -1.58
MIA40	YKL195W	MDM10	P18409	493 aa		5.17	□□□□□ -1.58
MIA40	YKL195W	YGL118C	P53132	145 aa		5.17	□□□□□ -1.58
MIA40	YKL195W	THG1	P53215	237 aa	Known RBP	5.17	□□□□□ -1.58
MIA40	YKL195W	YGR219W	P53307	113 aa		5.17	□□□□□ -1.58
MIA40	YKL195W	CAB4	P53332	305 aa		5.17	□□□□□ -1.58
MIA40	YKL195W	Q0297	Q9ZZV8	51 aa		5.17	□□□□□ -1.58
MIA40	YKL195W	RPL43A	P0CX25	92 aa	Known RBP	5.16	□□□□□ -1.58
MIA40	YKL195W	RPL43B	P0CX26	92 aa		5.16	□□□□□ -1.58
MIA40	YKL195W	SNF11	P38956	169 aa		5.16	□□□□□ -1.58
MIA40	YKL195W	GLE2	P40066	365 aa		5.16	□□□□□ -1.58
MIA40	YKL195W	PRE5	P40302	234 aa	Known RBP	5.16	□□□□□ -1.58
MIA40	YKL195W	CDC40	P40968	455 aa	Predicted RBP	5.16	□□□□□ -1.58
MIA40	YKL195W	AIM24	P47127	394 aa		5.16	□□□□□ -1.58
MIA40	YKL195W	YMR181C	Q03231	154 aa		5.16	□□□□□ -1.58
MIA40	YKL195W	UPS3	Q04006	179 aa		5.16	□□□□□ -1.58
MIA40	YKL195W	GTO3	Q04806	366 aa		5.16	□□□□□ -1.58
MIA40	YKL195W	FSF1	Q12029	327 aa	Known RBP	5.16	□□□□□ -1.58
MIA40	YKL195W	UTP23	Q12339	254 aa	Known RBP	5.16	□□□□□ -1.58
MIA40	YKL195W	YLR342W-A	Q3E810	57 aa		5.16	□□□□□ -1.58
MIA40	YKL195W	GSP1	P32835	219 aa	Known RBP	5.15	□□□□□ -1.59
MIA40	YKL195W	GSP2	P32836	220 aa	Known RBP	5.15	□□□□□ -1.59
MIA40	YKL195W	PAU16	P35994	123 aa		5.15	□□□□□ -1.59
MIA40	YKL195W	CMC1	P36064	111 aa		5.15	□□□□□ -1.59
MIA40	YKL195W	MIC12	P38341	106 aa		5.15	□□□□□ -1.59
MIA40	YKL195W	TEM1	P38987	245 aa		5.15	□□□□□ -1.59
MIA40	YKL195W	SAE3	P89114	91 aa		5.15	□□□□□ -1.59
MIA40	YKL195W	ARC18	Q05933	178 aa	Known RBP	5.15	□□□□□ -1.59
MIA40	YKL195W	CNL1	Q06333	122 aa		5.15	□□□□□ -1.59
MIA40	YKL195W	ATG33	Q06485	197 aa		5.15	□□□□□ -1.59
MIA40	YKL195W	YOL160W	Q08321	113 aa		5.15	□□□□□ -1.59
MIA40	YKL195W	GEP3	Q08622	556 aa		5.15	□□□□□ -1.59
MIA40	YKL195W	SRL1	Q08673	210 aa		5.15	□□□□□ -1.59
MIA40	YKL195W	BPH1	P25356	2167 aa		5.15	□□□□□ -1.59
MIA40	YKL195W	YER188W	P40103	239 aa		5.14	□□□□□ -1.59
MIA40	YKL195W	YPI1	P43587	155 aa		5.14	□□□□□ -1.59
MIA40	YKL195W	YGR017W	P53210	297 aa		5.14	□□□□□ -1.59
MIA40	YKL195W	PKR1	Q03880	122 aa	Known RBP	5.14	□□□□□ -1.59
MIA40	YKL195W	TRA1	P38811	3744 aa		5.13	□□□□□ -1.59
MIA40	YKL195W	TOR1	P35169	2470 aa		5.13	□□□□□ -1.59
MIA40	YKL195W	RPL27A	P0C2H6	136 aa	Known RBP	5.13	□□□□□ -1.59
MIA40	YKL195W	RPL12A	P0CX53	165 aa	Known RBP	5.13	□□□□□ -1.59
MIA40	YKL195W	RPL12B	P0CX54	165 aa		5.13	□□□□□ -1.59
MIA40	YKL195W	INO2	P26798	304 aa		5.13	□□□□□ -1.59
MIA40	YKL195W	YKL102C	P34249	101 aa		5.13	□□□□□ -1.59
MIA40	YKL195W	YPT53	P36019	220 aa		5.13	□□□□□ -1.59
MIA40	YKL195W	YJL028W	P47062	111 aa		5.13	□□□□□ -1.59
MIA40	YKL195W	TOS8	P53147	276 aa		5.13	□□□□□ -1.59
MIA40	YKL195W	RPL15B	P54780	204 aa	Predicted RBP	5.13	□□□□□ -1.59
MIA40	YKL195W	YML122C	Q03207	126 aa		5.13	□□□□□ -1.59
MIA40	YKL195W	TPT1	Q12272	230 aa	Known RBP	5.13	□□□□□ -1.59
MIA40	YKL195W	YDL085C-A	Q3E7B7	68 aa	Known RBP	5.13	□□□□□ -1.59
MIA40	YKL195W	MEC1	P38111	2368 aa		5.12	□□□□□ -1.59
MIA40	YKL195W	YLR415C	O13578	112 aa		5.12	□□□□□ -1.59
MIA40	YKL195W	ATP5	P09457	212 aa		5.12	□□□□□ -1.59
MIA40	YKL195W	YHR140W	P38842	239 aa		5.12	□□□□□ -1.59
MIA40	YKL195W	YNL200C	P40165	246 aa	Known RBP	5.12	□□□□□ -1.59
MIA40	YKL195W	GLC8	P41818	229 aa		5.12	□□□□□ -1.59
MIA40	YKL195W	LCB3	P47013	409 aa		5.12	□□□□□ -1.59
MIA40	YKL195W	VPS55	P47111	140 aa		5.12	□□□□□ -1.59
MIA40	YKL195W	MST27	P53176	234 aa		5.12	□□□□□ -1.59
MIA40	YKL195W	DIA1	P54005	336 aa		5.12	□□□□□ -1.59
MIA40	YKL195W	SPG4	Q04438	115 aa		5.12	□□□□□ -1.59
MIA40	YKL195W	NAT5	Q08689	176 aa		5.12	□□□□□ -1.59
MIA40	YKL195W	TIM22	Q12328	207 aa		5.12	□□□□□ -1.59
MIA40	YKL195W	HTL1	Q9URQ5	78 aa		5.12	□□□□□ -1.59
MIA40	YKL195W	CPT1	P17898	393 aa		5.11	□□□□□ -1.59
MIA40	YKL195W	COX16	P47081	118 aa		5.11	□□□□□ -1.59
MIA40	YKL195W	GPI19	Q04082	140 aa		5.11	□□□□□ -1.59
MIA40	YKL195W	MSC3	Q05812	728 aa		5.11	□□□□□ -1.59
MIA40	YKL195W	HOR7	Q05827	59 aa		5.11	□□□□□ -1.59
MIA40	YKL195W	RPB9	P27999	122 aa		5.1	□□□□□ -1.59
MIA40	YKL195W	YNL194C	P40169	301 aa		5.1	□□□□□ -1.59
MIA40	YKL195W	HAC1	P41546	238 aa		5.1	□□□□□ -1.59
MIA40	YKL195W	BRP1	P53194	125 aa		5.1	□□□□□ -1.59
MIA40	YKL195W	POP3	P53833	195 aa	Predicted RBP	5.1	□□□□□ -1.59
MIA40	YKL195W	DPP1	Q05521	289 aa		5.1	□□□□□ -1.59
MIA40	YKL195W	YFL068W	P0CX99	160 aa		5.09	□□□□□ -1.59
MIA40	YKL195W	YLL066W-A	P0CY00	160 aa		5.09	□□□□□ -1.59
MIA40	YKL195W	YLL067W-A	P0CY01	160 aa		5.09	□□□□□ -1.59
MIA40	YKL195W	VMA16	P23968	213 aa		5.09	□□□□□ -1.59
MIA40	YKL195W	RRG8	Q06109	277 aa		5.09	□□□□□ -1.59
MIA40	YKL195W	IZH3	Q07959	543 aa		5.09	□□□□□ -1.59

Retrieved 100 of 5,963 RNA–protein pairs in 16.3 ms