RNA–Protein interactions for RNA: YKL043W

PHD1, Transcript of Transcriptional activator that enhances pseudohyphal growth, yeastyeast

Gene PHD1, Length 1,101 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PHD1YKL043W YGR045CP53229 120 aa2.54□□□□□ -2
PHD1YKL043W RHO5P53879 331 aaKnown RBP2.54□□□□□ -2
PHD1YKL043W SWS2P53937 143 aa2.54□□□□□ -2
PHD1YKL043W NCE101Q02820 53 aa2.54□□□□□ -2
PHD1YKL043W YMR007WQ03675 126 aa2.54□□□□□ -2
PHD1YKL043W ROT1Q03691 256 aa2.54□□□□□ -2
PHD1YKL043W RAV2Q03956 351 aa2.54□□□□□ -2
PHD1YKL043W SHH4Q06236 168 aa2.54□□□□□ -2
PHD1YKL043W FCY1Q12178 158 aa2.54□□□□□ -2
PHD1YKL043W USB1Q12208 290 aaKnown RBP2.54□□□□□ -2
PHD1YKL043W YOR343CQ12484 108 aa2.54□□□□□ -2
PHD1YKL043W YLR412C-AQ3E742 68 aa2.54□□□□□ -2
PHD1YKL043W YAL063C-AQ3E791 96 aa2.54□□□□□ -2
PHD1YKL043W BOL1Q3E793 110 aa2.54□□□□□ -2
PHD1YKL043W SCS22Q6Q595 175 aa2.54□□□□□ -2
PHD1YKL043W ACC1Q00955 2233 aaKnown RBP2.54□□□□□ -2
PHD1YKL043W CDC39P25655 2108 aaKnown RBP2.53□□□□□ -2
PHD1YKL043W ECM12O13529 151 aa2.53□□□□□ -2
PHD1YKL043W VPS63O13549 108 aa2.53□□□□□ -2
PHD1YKL043W YER039C-AP0CD97 72 aa2.53□□□□□ -2
PHD1YKL043W RPL20AP0CX23 172 aaKnown RBP2.53□□□□□ -2
PHD1YKL043W RPL20BP0CX24 172 aaPredicted RBP2.53□□□□□ -2
PHD1YKL043W RPL23AP0CX41 137 aaKnown RBP2.53□□□□□ -2
PHD1YKL043W RPL23BP0CX42 137 aaKnown RBP2.53□□□□□ -2
PHD1YKL043W HSP12P22943 109 aaKnown RBP2.53□□□□□ -2
PHD1YKL043W TOM40P23644 387 aaKnown RBP2.53□□□□□ -2
PHD1YKL043W TOM6P33448 61 aa2.53□□□□□ -2
PHD1YKL043W NRG2P38082 220 aa2.53□□□□□ -2
PHD1YKL043W YGP1P38616 354 aaKnown RBP2.53□□□□□ -2
PHD1YKL043W YHL042WP38729 150 aa2.53□□□□□ -2
PHD1YKL043W ATF1P40353 525 aa2.53□□□□□ -2
PHD1YKL043W YIL059CP40520 121 aa2.53□□□□□ -2
PHD1YKL043W YFR045WP43617 309 aa2.53□□□□□ -2
PHD1YKL043W BRR6P53062 197 aa2.53□□□□□ -2
PHD1YKL043W CAX4P53223 239 aa2.53□□□□□ -2
PHD1YKL043W SUN4P53616 420 aa2.53□□□□□ -2
PHD1YKL043W YNR048WP53740 393 aa2.53□□□□□ -2
PHD1YKL043W YNR071CP53757 342 aa2.53□□□□□ -2
PHD1YKL043W NUP53Q03790 475 aa2.53□□□□□ -2
PHD1YKL043W RRG8Q06109 277 aa2.53□□□□□ -2
PHD1YKL043W LSM6Q06406 86 aaKnown RBP2.53□□□□□ -2
PHD1YKL043W RAF1Q06891 181 aa2.53□□□□□ -2
PHD1YKL043W IRC19Q07843 230 aa2.53□□□□□ -2
PHD1YKL043W YOR376WQ08900 122 aa2.53□□□□□ -2
PHD1YKL043W FIT3Q08907 204 aa2.53□□□□□ -2
PHD1YKL043W YDR119W-AQ2V2P9 66 aa2.53□□□□□ -2
PHD1YKL043W MRPL31P14063 131 aaPredicted RBP2.52□□□□□ -2.01
PHD1YKL043W RPL30P14120 105 aaKnown RBP2.52□□□□□ -2.01
PHD1YKL043W CDC43P18898 376 aa2.52□□□□□ -2.01
PHD1YKL043W YMR31P19955 123 aa2.52□□□□□ -2.01
PHD1YKL043W RPB8P20436 146 aa2.52□□□□□ -2.01
PHD1YKL043W TOA2P32774 122 aa2.52□□□□□ -2.01
PHD1YKL043W MID2P36027 376 aa2.52□□□□□ -2.01
PHD1YKL043W UTH1P36135 365 aa2.52□□□□□ -2.01
PHD1YKL043W MOH1P38191 138 aa2.52□□□□□ -2.01
PHD1YKL043W GPI18P38211 433 aa2.52□□□□□ -2.01
PHD1YKL043W OM14P38325 134 aa2.52□□□□□ -2.01
PHD1YKL043W EGT2P42835 1041 aa2.52□□□□□ -2.01
PHD1YKL043W UBC13P52490 153 aa2.52□□□□□ -2.01
PHD1YKL043W SDS23P53172 527 aa2.52□□□□□ -2.01
PHD1YKL043W MGR2Q02889 113 aa2.52□□□□□ -2.01
PHD1YKL043W YOR186WQ08560 144 aa2.52□□□□□ -2.01
PHD1YKL043W TIM18Q08749 192 aa2.52□□□□□ -2.01
PHD1YKL043W GRE1Q08969 168 aa2.52□□□□□ -2.01
PHD1YKL043W YOR097CQ12274 175 aaPredicted RBP2.52□□□□□ -2.01
PHD1YKL043W YGL258W-AQ3E740 77 aa2.52□□□□□ -2.01
PHD1YKL043W YPL038W-AQ3E7B4 63 aa2.52□□□□□ -2.01
PHD1YKL043W Q0255P03881 472 aa2.51□□□□□ -2.01
PHD1YKL043W YHR180WP38868 163 aa2.51□□□□□ -2.01
PHD1YKL043W YIL163CP40448 117 aa2.51□□□□□ -2.01
PHD1YKL043W MRPL49P40858 161 aaPredicted RBP2.51□□□□□ -2.01
PHD1YKL043W SHR5P41912 237 aa2.51□□□□□ -2.01
PHD1YKL043W SKI6P46948 246 aaPredicted RBP2.51□□□□□ -2.01
PHD1YKL043W YGR164WP53291 111 aa2.51□□□□□ -2.01
PHD1YKL043W HST4P53688 370 aa2.51□□□□□ -2.01
PHD1YKL043W YIL014C-AQ02598 104 aa2.51□□□□□ -2.01
PHD1YKL043W YMR254CQ04838 102 aa2.51□□□□□ -2.01
PHD1YKL043W IRC25Q07951 179 aa2.51□□□□□ -2.01
PHD1YKL043W NIP7Q08962 181 aaKnown RBP2.51□□□□□ -2.01
PHD1YKL043W MRPL23Q12487 163 aaPredicted RBP2.51□□□□□ -2.01
PHD1YKL043W POL2P21951 2222 aaKnown RBP2.51□□□□□ -2.01
PHD1YKL043W NUM1Q00402 2748 aa2.5□□□□□ -2.01
PHD1YKL043W CDC26P14724 124 aa2.5□□□□□ -2.01
PHD1YKL043W YCR006CP25350 157 aa2.5□□□□□ -2.01
PHD1YKL043W IMP1P28627 190 aa2.5□□□□□ -2.01
PHD1YKL043W SPC29P33419 253 aa2.5□□□□□ -2.01
PHD1YKL043W TIR2P33890 251 aa2.5□□□□□ -2.01
PHD1YKL043W LYS1P38998 373 aaRIP-Chip data2.5□□□□□ -2.01not detected
PHD1YKL043W GLE2P40066 365 aa2.5□□□□□ -2.01
PHD1YKL043W GON7P46984 123 aa2.5□□□□□ -2.01
PHD1YKL043W LCB3P47013 409 aa2.5□□□□□ -2.01
PHD1YKL043W TOS6P48560 102 aa2.5□□□□□ -2.01
PHD1YKL043W MST27P53176 234 aa2.5□□□□□ -2.01
PHD1YKL043W YMR103CQ04436 120 aa2.5□□□□□ -2.01
PHD1YKL043W FCF1Q05498 189 aaPredicted RBP2.5□□□□□ -2.01
PHD1YKL043W RDL2Q08742 149 aaKnown RBP2.5□□□□□ -2.01
PHD1YKL043W USV1Q12132 391 aa2.5□□□□□ -2.01
PHD1YKL043W YLR111WQ12528 110 aa2.5□□□□□ -2.01
PHD1YKL043W YHR214C-EQ8TGK0 99 aa2.5□□□□□ -2.01
PHD1YKL043W CCW14O13547 238 aa2.49□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 15.8 ms