RNA–Protein interactions for RNA: YDL217C

TIM22, Transcript of Essential core component of the mitochondrial TIM22 complex, yeast

Gene TIM22, Length 624 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TIM22	YDL217C	MIX17	Q03667	156 aa		4.97	□□□□□ -1.61
TIM22	YDL217C	NMA1	Q06178	401 aa	Known RBP	4.97	□□□□□ -1.61
TIM22	YDL217C	POS5	Q06892	414 aa		4.97	□□□□□ -1.61
TIM22	YDL217C	TIR4	Q12218	487 aa	Predicted RBP	4.97	□□□□□ -1.61
TIM22	YDL217C	YPR145C-A	Q2V2P0	78 aa		4.97	□□□□□ -1.61
TIM22	YDL217C	YNL277W-A	Q3E7Z0	62 aa		4.97	□□□□□ -1.61
TIM22	YDL217C	IGO2	Q9P305	131 aa		4.97	□□□□□ -1.61
TIM22	YDL217C	AAC1	P04710	309 aa		4.96	□□□□□ -1.62
TIM22	YDL217C	YJL213W	P40896	331 aa		4.96	□□□□□ -1.62
TIM22	YDL217C	PAM16	P42949	149 aa		4.96	□□□□□ -1.62
TIM22	YDL217C	YGR219W	P53307	113 aa		4.96	□□□□□ -1.62
TIM22	YDL217C	YIF1	P53845	314 aa	Known RBP	4.96	□□□□□ -1.62
TIM22	YDL217C	LPP1	Q04396	274 aa		4.96	□□□□□ -1.62
TIM22	YDL217C	JID1	Q12350	301 aa		4.96	□□□□□ -1.62
TIM22	YDL217C	YOS1	Q3E834	85 aa		4.96	□□□□□ -1.62
TIM22	YDL217C	YBR182C-A	Q8TGU6	64 aa		4.96	□□□□□ -1.62
TIM22	YDL217C	MRS1	P07266	363 aa		4.95	□□□□□ -1.62
TIM22	YDL217C	NOP1	P15646	327 aa	Known RBP	4.95	□□□□□ -1.62
TIM22	YDL217C	SDH4	P37298	181 aa		4.95	□□□□□ -1.62
TIM22	YDL217C	GPX2	P38143	162 aa		4.95	□□□□□ -1.62
TIM22	YDL217C	TEM1	P38987	245 aa		4.95	□□□□□ -1.62
TIM22	YDL217C	YPL073C	P40323	161 aa		4.95	□□□□□ -1.62
TIM22	YDL217C	MSL1	P40567	111 aa	Predicted RBP	4.95	□□□□□ -1.62
TIM22	YDL217C	SAS2	P40963	338 aa		4.95	□□□□□ -1.62
TIM22	YDL217C	YFL065C	P43539	102 aa		4.95	□□□□□ -1.62
TIM22	YDL217C	CAB4	P53332	305 aa		4.95	□□□□□ -1.62
TIM22	YDL217C	HOR7	Q05827	59 aa		4.95	□□□□□ -1.62
TIM22	YDL217C	PRM3	Q08931	133 aa		4.95	□□□□□ -1.62
TIM22	YDL217C	YPL264C	Q08980	353 aa		4.95	□□□□□ -1.62
TIM22	YDL217C	YPR203W	Q08994	102 aa		4.95	□□□□□ -1.62
TIM22	YDL217C	CYC1	P00044	109 aa	Predicted RBP	4.94	□□□□□ -1.62
TIM22	YDL217C	COX10	P21592	462 aa		4.94	□□□□□ -1.62
TIM22	YDL217C	UTR5	P32630	166 aa		4.94	□□□□□ -1.62
TIM22	YDL217C	YBR144C	P34215	104 aa		4.94	□□□□□ -1.62
TIM22	YDL217C	SWD3	P38123	315 aa		4.94	□□□□□ -1.62
TIM22	YDL217C	RPB11	P38902	120 aa		4.94	□□□□□ -1.62
TIM22	YDL217C	VMA21	P41806	77 aa		4.94	□□□□□ -1.62
TIM22	YDL217C	SMD3	P43321	101 aa	Known RBP	4.94	□□□□□ -1.62
TIM22	YDL217C	SFT1	P43682	97 aa		4.94	□□□□□ -1.62
TIM22	YDL217C	YGL262W	P53054	175 aa		4.94	□□□□□ -1.62
TIM22	YDL217C	CPD1	P53314	239 aa		4.94	□□□□□ -1.62
TIM22	YDL217C	ALG9	P53868	555 aa	Known RBP	4.94	□□□□□ -1.62
TIM22	YDL217C	VPS71	Q03433	280 aa		4.94	□□□□□ -1.62
TIM22	YDL217C	VBA1	Q04301	562 aa		4.94	□□□□□ -1.62
TIM22	YDL217C	NAT5	Q08689	176 aa		4.94	□□□□□ -1.62
TIM22	YDL217C	ODC2	Q99297	307 aa		4.94	□□□□□ -1.62
TIM22	YDL217C	Q0142	Q9ZZW4	58 aa		4.94	□□□□□ -1.62
TIM22	YDL217C	ACB1	P31787	87 aa		4.93	□□□□□ -1.62
TIM22	YDL217C	MTC7	P32633	139 aa		4.93	□□□□□ -1.62
TIM22	YDL217C	ZRT1	P32804	376 aa		4.93	□□□□□ -1.62
TIM22	YDL217C	ARP3	P47117	449 aa	Known RBP	4.93	□□□□□ -1.62
TIM22	YDL217C	VHT1	P53241	593 aa		4.93	□□□□□ -1.62
TIM22	YDL217C	FCF1	Q05498	189 aa	Predicted RBP	4.93	□□□□□ -1.62
TIM22	YDL217C	KEI1	Q06346	221 aa		4.93	□□□□□ -1.62
TIM22	YDL217C	PBP4	Q07362	185 aa	Known RBP	4.93	□□□□□ -1.62
TIM22	YDL217C	ATO3	Q12359	275 aa		4.93	□□□□□ -1.62
TIM22	YDL217C	SUS1	Q6WNK7	96 aa		4.93	□□□□□ -1.62
TIM22	YDL217C	MRPL20	P22354	195 aa	Predicted RBP	4.92	□□□□□ -1.62
TIM22	YDL217C	TRS20	P38334	175 aa		4.92	□□□□□ -1.62
TIM22	YDL217C	YHR138C	P38841	114 aa	Predicted RBP	4.92	□□□□□ -1.62
TIM22	YDL217C	YJL218W	P40892	196 aa	Known RBP	4.92	□□□□□ -1.62
TIM22	YDL217C	VPS55	P47111	140 aa		4.92	□□□□□ -1.62
TIM22	YDL217C	STP4	Q07351	490 aa		4.92	□□□□□ -1.62
TIM22	YDL217C	YOL029C	Q08187	201 aa		4.92	□□□□□ -1.62
TIM22	YDL217C	YLR365W	Q7LIF2	110 aa		4.92	□□□□□ -1.62
TIM22	YDL217C	MBF1	O14467	151 aa	Known RBP	4.91	□□□□□ -1.62
TIM22	YDL217C	RPS2	P25443	254 aa	Known RBP	4.91	□□□□□ -1.62
TIM22	YDL217C	QRI5	P32344	111 aa		4.91	□□□□□ -1.62
TIM22	YDL217C	ERV29	P53337	310 aa		4.91	□□□□□ -1.62
TIM22	YDL217C	YOR292C	Q08743	309 aa		4.91	□□□□□ -1.62
TIM22	YDL217C	YDR029W	Q12111	104 aa		4.91	□□□□□ -1.62
TIM22	YDL217C	DYN1	P36022	4092 aa		4.9	□□□□□ -1.62
TIM22	YDL217C	ECM12	O13529	151 aa		4.9	□□□□□ -1.63
TIM22	YDL217C	ADH1	P00330	348 aa	Known RBP	4.9	□□□□□ -1.63
TIM22	YDL217C	RPB7	P34087	171 aa		4.9	□□□□□ -1.63
TIM22	YDL217C	YFL015C	P43578	164 aa		4.9	□□□□□ -1.63
TIM22	YDL217C	ATP23	P53722	227 aa		4.9	□□□□□ -1.63
TIM22	YDL217C	YMR082C	Q04276	118 aa		4.9	□□□□□ -1.63
TIM22	YDL217C	YMR103C	Q04436	120 aa		4.9	□□□□□ -1.63
TIM22	YDL217C	SHH4	Q06236	168 aa		4.9	□□□□□ -1.63
TIM22	YDL217C	SME1	Q12330	94 aa	Predicted RBP	4.9	□□□□□ -1.63
TIM22	YDL217C	YOR192C-C	Q3E736	78 aa		4.9	□□□□□ -1.63
TIM22	YDL217C	RPS25B	P0C0T4	108 aa	Known RBP	4.89	□□□□□ -1.63
TIM22	YDL217C	RPL11A	P0C0W9	174 aa	Known RBP	4.89	□□□□□ -1.63
TIM22	YDL217C	YKR070W	P36151	352 aa	Known RBP	4.89	□□□□□ -1.63
TIM22	YDL217C	YIA6	P40556	373 aa		4.89	□□□□□ -1.63
TIM22	YDL217C	HST4	P53688	370 aa		4.89	□□□□□ -1.63
TIM22	YDL217C	BUD25	P85052	153 aa		4.89	□□□□□ -1.63
TIM22	YDL217C	YMR090W	Q04304	227 aa	Known RBP	4.89	□□□□□ -1.63
TIM22	YDL217C	ATG41	Q12048	136 aa		4.89	□□□□□ -1.63
TIM22	YDL217C	YPS3	Q12303	508 aa		4.89	□□□□□ -1.63
TIM22	YDL217C	RPL11B	Q3E757	174 aa	Predicted RBP	4.89	□□□□□ -1.63
TIM22	YDL217C	RPS25A	Q3E792	108 aa	Predicted RBP	4.89	□□□□□ -1.63
TIM22	YDL217C	YBL112C	Q3E7Y4	105 aa		4.89	□□□□□ -1.63
TIM22	YDL217C	YHR212W-A	P0CX91	67 aa		4.88	□□□□□ -1.63
TIM22	YDL217C	CKS1	P20486	150 aa	Known RBP	4.88	□□□□□ -1.63
TIM22	YDL217C	PAU15	P40585	124 aa		4.88	□□□□□ -1.63
TIM22	YDL217C	FIP1	P45976	327 aa		4.88	□□□□□ -1.63
TIM22	YDL217C	TOS8	P53147	276 aa		4.88	□□□□□ -1.63
TIM22	YDL217C	YGR164W	P53291	111 aa		4.88	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 16.1 ms