RNA–Protein interactions for RNA: YBL067C

UBP13, Transcript of Ubiquitin-specific protease that cleaves Ub-protein fusions, yeast

Gene UBP13, Length 2,244 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBP13	YBL067C	SPG1	P50088	95 aa		5.18	□□□□□ -1.58
UBP13	YBL067C	MRPL44	P19956	98 aa		5.17	□□□□□ -1.58
UBP13	YBL067C	ERV14	P53173	138 aa		5.17	□□□□□ -1.58
UBP13	YBL067C	SOM1	Q05676	74 aa		5.17	□□□□□ -1.58
UBP13	YBL067C	QCR10	P37299	77 aa		5.16	□□□□□ -1.58
UBP13	YBL067C	YOS1	Q3E834	85 aa		5.16	□□□□□ -1.58
UBP13	YBL067C	IRC23	Q08416	157 aa		5.16	□□□□□ -1.58
UBP13	YBL067C	EMC5	P40540	141 aa		5.15	□□□□□ -1.58
UBP13	YBL067C	YJL027C	P47063	138 aa	Predicted RBP	5.15	□□□□□ -1.58
UBP13	YBL067C	GPI19	Q04082	140 aa		5.15	□□□□□ -1.58
UBP13	YBL067C	LAA1	P39526	2014 aa		5.15	□□□□□ -1.59
UBP13	YBL067C	GEA1	P47102	1408 aa	Predicted RBP	5.15	□□□□□ -1.59
UBP13	YBL067C	YHR180W	P38868	163 aa		5.15	□□□□□ -1.59
UBP13	YBL067C	KRE9	P39005	276 aa		5.15	□□□□□ -1.59
UBP13	YBL067C	YMR295C	Q03559	197 aa		5.15	□□□□□ -1.59
UBP13	YBL067C	IRC19	Q07843	230 aa		5.15	□□□□□ -1.59
UBP13	YBL067C	FYV5	P25585	152 aa		5.14	□□□□□ -1.59
UBP13	YBL067C	LSM2	P38203	95 aa	Known RBP	5.14	□□□□□ -1.59
UBP13	YBL067C	CWP2	P43497	92 aa		5.14	□□□□□ -1.59
UBP13	YBL067C	PAU12	P53343	120 aa		5.14	□□□□□ -1.59
UBP13	YBL067C	RPL40A	P0CH08	128 aa	Known RBP	5.13	□□□□□ -1.59
UBP13	YBL067C	RPL40B	P0CH09	128 aa	Known RBP	5.13	□□□□□ -1.59
UBP13	YBL067C	FMT1	P32785	401 aa		5.13	□□□□□ -1.59
UBP13	YBL067C	MSL1	P40567	111 aa	Predicted RBP	5.13	□□□□□ -1.59
UBP13	YBL067C	UPS3	Q04006	179 aa		5.13	□□□□□ -1.59
UBP13	YBL067C	RAF1	Q06891	181 aa		5.13	□□□□□ -1.59
UBP13	YBL067C	TY3B-I	Q7LHG5	1498 aa	Known RBP	5.13	□□□□□ -1.59
UBP13	YBL067C	HIR3	P47171	1648 aa		5.13	□□□□□ -1.59
UBP13	YBL067C	ATG40	Q99325	256 aa		5.12	□□□□□ -1.59
UBP13	YBL067C	YRF1-2	P40105	1681 aa		5.12	□□□□□ -1.59
UBP13	YBL067C	YBL059W	P34224	193 aa		5.12	□□□□□ -1.59
UBP13	YBL067C	YGR026W	P53217	278 aa		5.12	□□□□□ -1.59
UBP13	YBL067C	RSM19	P53733	91 aa	Predicted RBP	5.12	□□□□□ -1.59
UBP13	YBL067C	PAU2	P32612	120 aa		5.11	□□□□□ -1.59
UBP13	YBL067C	THG1	P53215	237 aa	Known RBP	5.11	□□□□□ -1.59
UBP13	YBL067C	IGO1	P53897	168 aa		5.11	□□□□□ -1.59
UBP13	YBL067C	ECM12	O13529	151 aa		5.11	□□□□□ -1.59
UBP13	YBL067C	MDM35	O60200	86 aa		5.11	□□□□□ -1.59
UBP13	YBL067C	YBR013C	P38215	129 aa		5.11	□□□□□ -1.59
UBP13	YBL067C	YEL067C	P39978	195 aa		5.11	□□□□□ -1.59
UBP13	YBL067C	TY1B-DR5	P0C2I2	1755 aa		5.1	□□□□□ -1.59
UBP13	YBL067C	TY1B-DR6	P0C2I3	1755 aa		5.1	□□□□□ -1.59
UBP13	YBL067C	TY1B-LR2	P0C2I5	1755 aa		5.1	□□□□□ -1.59
UBP13	YBL067C	TY1B-LR3	P0C2I6	1755 aa	Known RBP	5.1	□□□□□ -1.59
UBP13	YBL067C	TY1B-PR1	P0C2I9	1755 aa	Known RBP	5.1	□□□□□ -1.59
UBP13	YBL067C	TY1B-PR3	P0C2J1	1755 aa	Known RBP	5.1	□□□□□ -1.59
UBP13	YBL067C	TY1B-JR1	P47098	1755 aa		5.1	□□□□□ -1.59
UBP13	YBL067C	TY1B-ML2	Q03434	1755 aa	Known RBP	5.1	□□□□□ -1.59
UBP13	YBL067C	TY1B-ER1	Q03612	1755 aa		5.1	□□□□□ -1.59
UBP13	YBL067C	TY1B-ML1	Q04711	1755 aa	Known RBP	5.1	□□□□□ -1.59
UBP13	YBL067C	TY1B-GR2	Q12269	1755 aa		5.1	□□□□□ -1.59
UBP13	YBL067C	TY1B-OL	Q12273	1755 aa		5.1	□□□□□ -1.59
UBP13	YBL067C	TY1B-PL	Q12414	1755 aa	Known RBP	5.1	□□□□□ -1.59
UBP13	YBL067C	PEP8	P40335	379 aa		5.1	□□□□□ -1.59
UBP13	YBL067C	BPT1	P14772	1559 aa		5.09	□□□□□ -1.59
UBP13	YBL067C	YHP1	Q04116	353 aa		5.08	□□□□□ -1.6
UBP13	YBL067C	YLR296W	Q05898	108 aa		5.08	□□□□□ -1.6
UBP13	YBL067C	PAU24	P38155	120 aa		5.07	□□□□□ -1.6
UBP13	YBL067C	TIR3	P40552	269 aa		5.07	□□□□□ -1.6
UBP13	YBL067C	ATG41	Q12048	136 aa		5.07	□□□□□ -1.6
UBP13	YBL067C	TY1B-GR3	Q12316	1755 aa		5.06	□□□□□ -1.6
UBP13	YBL067C	TY1B-OR	Q92393	1755 aa		5.06	□□□□□ -1.6
UBP13	YBL067C	YFL065C	P43539	102 aa		5.06	□□□□□ -1.6
UBP13	YBL067C	YPR203W	Q08994	102 aa		5.06	□□□□□ -1.6
UBP13	YBL067C	YBR298C-A	Q8TGK4	73 aa		5.06	□□□□□ -1.6
UBP13	YBL067C	MYO1	P08964	1928 aa		5.06	□□□□□ -1.6
UBP13	YBL067C	ELP6	Q04868	273 aa		5.05	□□□□□ -1.6
UBP13	YBL067C	SML1	Q04964	104 aa		5.05	□□□□□ -1.6
UBP13	YBL067C	COA6	Q3E846	104 aa		5.05	□□□□□ -1.6
UBP13	YBL067C	PEP1	P32319	1579 aa		5.05	□□□□□ -1.6
UBP13	YBL067C	YER187W	P40102	141 aa		5.04	□□□□□ -1.6
UBP13	YBL067C	POC4	Q12245	148 aa	Predicted RBP	5.04	□□□□□ -1.6
UBP13	YBL067C	AUS1	Q08409	1394 aa		5.04	□□□□□ -1.6
UBP13	YBL067C	YFR010W-A	P0C5N0	62 aa		5.04	□□□□□ -1.6
UBP13	YBL067C	CYB5	P40312	120 aa		5.04	□□□□□ -1.6
UBP13	YBL067C	DAN1	P47178	298 aa		5.04	□□□□□ -1.6
UBP13	YBL067C	MRPS16	Q02608	121 aa		5.04	□□□□□ -1.6
UBP13	YBL067C	MSB2	P32334	1306 aa		5.03	□□□□□ -1.6
UBP13	YBL067C	ECM34	P38728	170 aa		5.03	□□□□□ -1.6
UBP13	YBL067C	BOL2	P53082	120 aa		5.03	□□□□□ -1.6
UBP13	YBL067C	YHR213W-A	Q8TGT4	77 aa		5.01	□□□□□ -1.61
UBP13	YBL067C	RPA190	P10964	1664 aa	Known RBP	5.01	□□□□□ -1.61
UBP13	YBL067C	CMC4	Q3E7A9	73 aa		5.01	□□□□□ -1.61
UBP13	YBL067C	SCC2	Q04002	1493 aa		5	□□□□□ -1.61
UBP13	YBL067C	YPK9	Q12697	1472 aa		5	□□□□□ -1.61
UBP13	YBL067C	YKR045C	P36138	183 aa		5	□□□□□ -1.61
UBP13	YBL067C	YDR042C	Q03205	200 aa		5	□□□□□ -1.61
UBP13	YBL067C	XRN1	P22147	1528 aa	Known RBP	5	□□□□□ -1.61
UBP13	YBL067C	MPC1	P53157	130 aa	Known RBP	5	□□□□□ -1.61
UBP13	YBL067C	YIL014C-A	Q02598	104 aa		5	□□□□□ -1.61
UBP13	YBL067C	PIR1	Q03178	341 aa		5	□□□□□ -1.61
UBP13	YBL067C	YPR013C	Q12145	317 aa		5	□□□□□ -1.61
UBP13	YBL067C	ATG2	P53855	1592 aa		5	□□□□□ -1.61
UBP13	YBL067C	YCF1	P39109	1515 aa	Known RBP	4.99	□□□□□ -1.61
UBP13	YBL067C	PAU19	P0CE85	124 aa		4.99	□□□□□ -1.61
UBP13	YBL067C	PAU3	P25610	124 aa		4.99	□□□□□ -1.61
UBP13	YBL067C	YPL261C	Q08976	102 aa		4.99	□□□□□ -1.61
UBP13	YBL067C	YLR236C	A0A023PZG4	107 aa		4.99	□□□□□ -1.61
UBP13	YBL067C	RTC6	O14464	93 aa		4.99	□□□□□ -1.61
UBP13	YBL067C	PAU21	P0CE86	164 aa		4.99	□□□□□ -1.61

Retrieved 100 of 5,963 RNA–protein pairs in 41 ms