RNA–Protein interactions for RNA: YOR006C

TSR3, Transcript of Protein required for 20S pre-rRNA processing, yeast

Gene TSR3, Length 942 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TSR3	YOR006C	ERV15	P38312	142 aa		4.97	□□□□□ -1.61
TSR3	YOR006C	ERV14	P53173	138 aa		4.97	□□□□□ -1.61
TSR3	YOR006C	FSH2	Q05015	223 aa		4.97	□□□□□ -1.61
TSR3	YOR006C	YLR179C	Q06252	201 aa	Known RBP	4.97	□□□□□ -1.61
TSR3	YOR006C	CYC3	P06182	269 aa		4.96	□□□□□ -1.62
TSR3	YOR006C	CUP2	P15315	225 aa		4.96	□□□□□ -1.62
TSR3	YOR006C	INO2	P26798	304 aa		4.96	□□□□□ -1.62
TSR3	YOR006C	SCM4	P32564	187 aa		4.96	□□□□□ -1.62
TSR3	YOR006C	PHD1	P36093	366 aa		4.96	□□□□□ -1.62
TSR3	YOR006C	ATG27	P46989	271 aa		4.96	□□□□□ -1.62
TSR3	YOR006C	MIC26	P50087	233 aa		4.96	□□□□□ -1.62
TSR3	YOR006C	MGA1	P53050	456 aa		4.96	□□□□□ -1.62
TSR3	YOR006C	NIF3	P53081	288 aa		4.96	□□□□□ -1.62
TSR3	YOR006C	ACT1	P60010	375 aa	Known RBP	4.96	□□□□□ -1.62
TSR3	YOR006C	ODC1	Q03028	310 aa		4.96	□□□□□ -1.62
TSR3	YOR006C	TMA23	Q03525	211 aa		4.96	□□□□□ -1.62
TSR3	YOR006C	TVP18	Q04767	167 aa		4.96	□□□□□ -1.62
TSR3	YOR006C	HOR7	Q05827	59 aa		4.96	□□□□□ -1.62
TSR3	YOR006C	CNL1	Q06333	122 aa		4.96	□□□□□ -1.62
TSR3	YOR006C	NOP1	P15646	327 aa	Known RBP	4.95	□□□□□ -1.62
TSR3	YOR006C	DOG2	P38773	246 aa		4.95	□□□□□ -1.62
TSR3	YOR006C	VPS55	P47111	140 aa		4.95	□□□□□ -1.62
TSR3	YOR006C	RPL31A	P0C2H8	113 aa	Known RBP	4.94	□□□□□ -1.62
TSR3	YOR006C	RPL31B	P0C2H9	113 aa	Known RBP	4.94	□□□□□ -1.62
TSR3	YOR006C	RPL18A	P0CX49	186 aa	Known RBP	4.94	□□□□□ -1.62
TSR3	YOR006C	RPL18B	P0CX50	186 aa	Known RBP	4.94	□□□□□ -1.62
TSR3	YOR006C	FCY2	P17064	533 aa		4.94	□□□□□ -1.62
TSR3	YOR006C	POF1	P25576	258 aa		4.94	□□□□□ -1.62
TSR3	YOR006C	TIR2	P33890	251 aa		4.94	□□□□□ -1.62
TSR3	YOR006C	WWM1	P43582	211 aa	Known RBP	4.94	□□□□□ -1.62
TSR3	YOR006C	MMS2	P53152	137 aa		4.94	□□□□□ -1.62
TSR3	YOR006C	MRPS16	Q02608	121 aa		4.94	□□□□□ -1.62
TSR3	YOR006C	VPS28	Q02767	242 aa		4.94	□□□□□ -1.62
TSR3	YOR006C	ATG5	Q12380	294 aa		4.94	□□□□□ -1.62
TSR3	YOR006C	MAG1	P22134	296 aa	Known RBP	4.93	□□□□□ -1.62
TSR3	YOR006C	YKL162C	P36052	402 aa		4.93	□□□□□ -1.62
TSR3	YOR006C	YKR045C	P36138	183 aa		4.93	□□□□□ -1.62
TSR3	YOR006C	RPL13B	P40212	199 aa	Known RBP	4.93	□□□□□ -1.62
TSR3	YOR006C	YIR035C	P40579	254 aa		4.93	□□□□□ -1.62
TSR3	YOR006C	GLC8	P41818	229 aa		4.93	□□□□□ -1.62
TSR3	YOR006C	FIP1	P45976	327 aa		4.93	□□□□□ -1.62
TSR3	YOR006C	RPA43	P46669	326 aa		4.93	□□□□□ -1.62
TSR3	YOR006C	YJR012C	P47087	207 aa		4.93	□□□□□ -1.62
TSR3	YOR006C	ARP3	P47117	449 aa	Known RBP	4.93	□□□□□ -1.62
TSR3	YOR006C	ERG25	P53045	309 aa		4.93	□□□□□ -1.62
TSR3	YOR006C	ELC1	Q03071	99 aa		4.93	□□□□□ -1.62
TSR3	YOR006C	RPL13A	Q12690	199 aa	Predicted RBP	4.93	□□□□□ -1.62
TSR3	YOR006C	YGL258W-A	Q3E740	77 aa		4.93	□□□□□ -1.62
TSR3	YOR006C	RPL28	P02406	149 aa	Known RBP	4.92	□□□□□ -1.62
TSR3	YOR006C	MRPL38	P35996	138 aa	Predicted RBP	4.92	□□□□□ -1.62
TSR3	YOR006C	LST8	P41318	303 aa		4.92	□□□□□ -1.62
TSR3	YOR006C	YCH1	P42937	148 aa		4.92	□□□□□ -1.62
TSR3	YOR006C	TOS8	P53147	276 aa		4.92	□□□□□ -1.62
TSR3	YOR006C	YGR026W	P53217	278 aa		4.92	□□□□□ -1.62
TSR3	YOR006C	CRH1	P53301	507 aa		4.92	□□□□□ -1.62
TSR3	YOR006C	YNL184C	P53876	108 aa		4.92	□□□□□ -1.62
TSR3	YOR006C	PRM3	Q08931	133 aa		4.92	□□□□□ -1.62
TSR3	YOR006C	PBI2	P0CT04	75 aa	Known RBP	4.91	□□□□□ -1.62
TSR3	YOR006C	URA5	P13298	226 aa	Known RBP	4.91	□□□□□ -1.62
TSR3	YOR006C	MIG1	P27705	504 aa		4.91	□□□□□ -1.62
TSR3	YOR006C	YPC1	P38298	316 aa		4.91	□□□□□ -1.62
TSR3	YOR006C	YEA6	P39953	335 aa		4.91	□□□□□ -1.62
TSR3	YOR006C	DFG10	P40526	253 aa		4.91	□□□□□ -1.62
TSR3	YOR006C	YGR050C	P53231	118 aa		4.91	□□□□□ -1.62
TSR3	YOR006C	MSO1	P53604	210 aa	Known RBP	4.91	□□□□□ -1.62
TSR3	YOR006C	PBP4	Q07362	185 aa	Known RBP	4.91	□□□□□ -1.62
TSR3	YOR006C	RAD28	Q12021	506 aa		4.91	□□□□□ -1.62
TSR3	YOR006C	ARO2	P28777	376 aa	Known RBP	4.9	□□□□□ -1.63
TSR3	YOR006C	NSA2	P40078	261 aa	Known RBP	4.9	□□□□□ -1.63
TSR3	YOR006C	CAB4	P53332	305 aa		4.9	□□□□□ -1.63
TSR3	YOR006C	GPI15	P53961	229 aa		4.9	□□□□□ -1.63
TSR3	YOR006C	YMR090W	Q04304	227 aa	Known RBP	4.9	□□□□□ -1.63
TSR3	YOR006C	LDS2	Q08218	356 aa		4.9	□□□□□ -1.63
TSR3	YOR006C	AIM45	Q12480	344 aa	Known RBP	4.9	□□□□□ -1.63
TSR3	YOR006C	VAR1	P02381	398 aa		4.89	□□□□□ -1.63
TSR3	YOR006C	YHR212W-A	P0CX91	67 aa		4.89	□□□□□ -1.63
TSR3	YOR006C	YBR144C	P34215	104 aa		4.89	□□□□□ -1.63
TSR3	YOR006C	DOG1	P38774	246 aa		4.89	□□□□□ -1.63
TSR3	YOR006C	GLE2	P40066	365 aa		4.89	□□□□□ -1.63
TSR3	YOR006C	CPD1	P53314	239 aa		4.89	□□□□□ -1.63
TSR3	YOR006C	YIF1	P53845	314 aa	Known RBP	4.89	□□□□□ -1.63
TSR3	YOR006C	EST3	Q03096	181 aa		4.89	□□□□□ -1.63
TSR3	YOR006C	YLR146W-A	Q2V2P1	62 aa		4.89	□□□□□ -1.63
TSR3	YOR006C	TIP1	P27654	210 aa	Predicted RBP	4.88	□□□□□ -1.63
TSR3	YOR006C	YER076C	P40049	302 aa		4.88	□□□□□ -1.63
TSR3	YOR006C	TAD2	P47058	250 aa		4.88	□□□□□ -1.63
TSR3	YOR006C	RRT7	Q07829	113 aa		4.88	□□□□□ -1.63
TSR3	YOR006C	IRC23	Q08416	157 aa		4.88	□□□□□ -1.63
TSR3	YOR006C	YPS3	Q12303	508 aa		4.88	□□□□□ -1.63
TSR3	YOR006C	YBR298C-A	Q8TGK4	73 aa		4.88	□□□□□ -1.63
TSR3	YOR006C	SOD1	P00445	154 aa	Known RBP	4.87	□□□□□ -1.63
TSR3	YOR006C	CPR1	P14832	162 aa	Known RBP	4.87	□□□□□ -1.63
TSR3	YOR006C	GRX2	P17695	143 aa	Known RBP	4.87	□□□□□ -1.63
TSR3	YOR006C	MRS4	P23500	304 aa		4.87	□□□□□ -1.63
TSR3	YOR006C	ELO2	P25358	347 aa		4.87	□□□□□ -1.63
TSR3	YOR006C	SRB6	P32570	121 aa		4.87	□□□□□ -1.63
TSR3	YOR006C	YBL071C	P38185	102 aa		4.87	□□□□□ -1.63
TSR3	YOR006C	SNU13	P39990	126 aa	Known RBP	4.87	□□□□□ -1.63
TSR3	YOR006C	YGR219W	P53307	113 aa		4.87	□□□□□ -1.63
TSR3	YOR006C	HHO1	P53551	258 aa		4.87	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 54.2 ms