RNA–Protein interactions for RNA: YKR053C

YSR3, Transcript of Dihydrosphingosine 1-phosphate phosphatase, yeastyeast

Gene YSR3, Length 1,215 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YSR3YKR053C COX19Q3E731 98 aa7.54□□□□□ -1.2
YSR3YKR053C RPL2AP0CX45 254 aaKnown RBP7.53□□□□□ -1.2
YSR3YKR053C RPL2BP0CX46 254 aaKnown RBP7.53□□□□□ -1.2
YSR3YKR053C VMA22P38784 181 aa7.53□□□□□ -1.2
YSR3YKR053C YFR035CP43608 114 aa7.53□□□□□ -1.2
YSR3YKR053C ERV2Q12284 196 aa7.53□□□□□ -1.2
YSR3YKR053C PAU4P53427 120 aa7.52□□□□□ -1.21
YSR3YKR053C TMA23Q03525 211 aa7.52□□□□□ -1.21
YSR3YKR053C SME1Q12330 94 aaPredicted RBP7.52□□□□□ -1.21
YSR3YKR053C RPS11AP0CX47 156 aaKnown RBP7.51□□□□□ -1.21
YSR3YKR053C RPS11BP0CX48 156 aaKnown RBP7.51□□□□□ -1.21
YSR3YKR053C YHR022CP38763 256 aa7.51□□□□□ -1.21
YSR3YKR053C YHR173CP38864 112 aa7.51□□□□□ -1.21
YSR3YKR053C LOC1P43586 204 aaPredicted RBP7.51□□□□□ -1.21
YSR3YKR053C HTB2P02294 131 aa7.5□□□□□ -1.21
YSR3YKR053C RPP1AP05318 106 aaPredicted RBP7.5□□□□□ -1.21
YSR3YKR053C RPS0AP32905 252 aaKnown RBP7.5□□□□□ -1.21
YSR3YKR053C AFR1P33304 620 aa7.5□□□□□ -1.21
YSR3YKR053C YJR096WP47137 282 aa7.5□□□□□ -1.21
YSR3YKR053C SDO1Q07953 250 aaKnown RBP7.5□□□□□ -1.21
YSR3YKR053C TMA17Q12513 150 aa7.5□□□□□ -1.21
YSR3YKR053C RNA15P25299 296 aaPredicted RBP7.49□□□□□ -1.21
YSR3YKR053C HMX1P32339 317 aa7.49□□□□□ -1.21
YSR3YKR053C NNK1P36003 928 aa7.49□□□□□ -1.21
YSR3YKR053C RPL14AP36105 138 aaKnown RBP7.49□□□□□ -1.21
YSR3YKR053C RPL14BP38754 138 aaKnown RBP7.49□□□□□ -1.21
YSR3YKR053C YBR298C-AQ8TGK4 73 aa7.49□□□□□ -1.21
YSR3YKR053C YBR085C-AO43137 85 aa7.48□□□□□ -1.21
YSR3YKR053C PAU1P0CE88 120 aa7.48□□□□□ -1.21
YSR3YKR053C PAU14P0CE89 120 aa7.48□□□□□ -1.21
YSR3YKR053C PAU6P0CE90 120 aa7.48□□□□□ -1.21
YSR3YKR053C PAU18P0CE91 120 aa7.48□□□□□ -1.21
YSR3YKR053C PAU8P0CE92 120 aa7.48□□□□□ -1.21
YSR3YKR053C PAU11P0CE93 120 aa7.48□□□□□ -1.21
YSR3YKR053C PAU13P38725 120 aa7.48□□□□□ -1.21
YSR3YKR053C SPI1P40092 148 aa7.48□□□□□ -1.21
YSR3YKR053C TOM7P53507 60 aa7.48□□□□□ -1.21
YSR3YKR053C FMP41P53889 259 aaKnown RBP7.48□□□□□ -1.21
YSR3YKR053C PAU10Q03050 120 aa7.48□□□□□ -1.21
YSR3YKR053C PAU20Q08322 120 aa7.48□□□□□ -1.21
YSR3YKR053C VAM10Q08474 114 aa7.48□□□□□ -1.21
YSR3YKR053C YDR215CQ12240 137 aa7.48□□□□□ -1.21
YSR3YKR053C PAU9Q3E770 120 aa7.48□□□□□ -1.21
YSR3YKR053C CPT1P17898 393 aa7.47□□□□□ -1.21
YSR3YKR053C RAV2Q03956 351 aa7.47□□□□□ -1.21
YSR3YKR053C MSK1P32048 576 aa7.46□□□□□ -1.22
YSR3YKR053C SGF11Q03067 99 aa7.46□□□□□ -1.22
YSR3YKR053C RPL31BP0C2H9 113 aaKnown RBP7.45□□□□□ -1.22
YSR3YKR053C TY1A-HP0C2I4 478 aaKnown RBP7.45□□□□□ -1.22
YSR3YKR053C AME1P38313 324 aa7.45□□□□□ -1.22
YSR3YKR053C CYB5P40312 120 aa7.45□□□□□ -1.22
YSR3YKR053C UBC12P52491 188 aa7.45□□□□□ -1.22
YSR3YKR053C HAL1Q01766 294 aa7.45□□□□□ -1.22
YSR3YKR053C RPS22AP0C0W1 130 aaKnown RBP7.44□□□□□ -1.22
YSR3YKR053C RIB5P38145 238 aa7.44□□□□□ -1.22
YSR3YKR053C VAR1P02381 398 aa7.43□□□□□ -1.22
YSR3YKR053C YCR001WP25347 104 aa7.43□□□□□ -1.22
YSR3YKR053C YMR141CP40211 102 aa7.43□□□□□ -1.22
YSR3YKR053C HUA1P40325 198 aa7.43□□□□□ -1.22
YSR3YKR053C VHS2P40463 436 aa7.43□□□□□ -1.22
YSR3YKR053C YOL085CQ99345 113 aa7.43□□□□□ -1.22
YSR3YKR053C YPT10P38146 199 aa7.42□□□□□ -1.22
YSR3YKR053C SNN1P48232 102 aa7.42□□□□□ -1.22
YSR3YKR053C YGL185CP53100 379 aa7.42□□□□□ -1.22
YSR3YKR053C UTP23Q12339 254 aaKnown RBP7.42□□□□□ -1.22
YSR3YKR053C FMP16Q12497 93 aa7.42□□□□□ -1.22
YSR3YKR053C YLR342W-AQ3E810 57 aa7.42□□□□□ -1.22
YSR3YKR053C YCR075W-AQ3E830 75 aa7.42□□□□□ -1.22
YSR3YKR053C YLR302CO13544 120 aa7.41□□□□□ -1.22
YSR3YKR053C VMA16P23968 213 aa7.41□□□□□ -1.22
YSR3YKR053C SAP30P38429 201 aa7.41□□□□□ -1.22
YSR3YKR053C COA4Q05809 96 aa7.41□□□□□ -1.22
YSR3YKR053C YIL163CP40448 117 aa7.4□□□□□ -1.22
YSR3YKR053C COX16P47081 118 aa7.4□□□□□ -1.22
YSR3YKR053C DAD4P69851 72 aa7.4□□□□□ -1.22
YSR3YKR053C DAD1Q12248 94 aa7.4□□□□□ -1.22
YSR3YKR053C YBR126W-AQ8TGU7 68 aa7.4□□□□□ -1.22
YSR3YKR053C ECM25P32525 599 aa7.39□□□□□ -1.23
YSR3YKR053C VMA7P39111 118 aa7.39□□□□□ -1.23
YSR3YKR053C ATP19P81451 68 aa7.39□□□□□ -1.23
YSR3YKR053C SNO1Q03144 224 aa7.39□□□□□ -1.23
YSR3YKR053C ATP14Q12349 124 aa7.38□□□□□ -1.23
YSR3YKR053C KEG1P43614 200 aa7.37□□□□□ -1.23
YSR3YKR053C YMR253CQ04835 414 aa7.37□□□□□ -1.23
YSR3YKR053C VMA9Q3E7B6 73 aa7.37□□□□□ -1.23
YSR3YKR053C MRPL4P36517 319 aa7.36□□□□□ -1.23
YSR3YKR053C YCH1P42937 148 aa7.36□□□□□ -1.23
YSR3YKR053C YPS5P53057 165 aa7.36□□□□□ -1.23
YSR3YKR053C YDR366CP87287 132 aa7.36□□□□□ -1.23
YSR3YKR053C PCC1Q3E833 88 aa7.36□□□□□ -1.23
YSR3YKR053C Q0255P03881 472 aa7.35□□□□□ -1.23
YSR3YKR053C SEC59P20048 519 aa7.35□□□□□ -1.23
YSR3YKR053C POF1P25576 258 aa7.35□□□□□ -1.23
YSR3YKR053C TIM21P53220 239 aa7.35□□□□□ -1.23
YSR3YKR053C UPS3Q04006 179 aa7.35□□□□□ -1.23
YSR3YKR053C YOR105WQ08504 108 aa7.35□□□□□ -1.23
YSR3YKR053C RPL12AP0CX53 165 aaKnown RBP7.34□□□□□ -1.23
YSR3YKR053C RPL12BP0CX54 165 aa7.34□□□□□ -1.23
YSR3YKR053C SRP21P32342 167 aa7.34□□□□□ -1.23
YSR3YKR053C RPR2P40571 144 aa7.34□□□□□ -1.23
Retrieved 100 of 5,963 RNA–protein pairs in 19.5 ms