RNA–Protein interactions for RNA: YKL165C

MCD4, Transcript of Protein involved in GPI anchor synthesis, yeast

Gene MCD4, Length 2,760 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MCD4	YKL165C	ZRT3	P34240	503 aa		3.12	□□□□□ -1.91
MCD4	YKL165C	MIX23	P38162	196 aa		3.12	□□□□□ -1.91
MCD4	YKL165C	YAL064W	P39711	94 aa		3.12	□□□□□ -1.91
MCD4	YKL165C	NSA2	P40078	261 aa	Known RBP	3.12	□□□□□ -1.91
MCD4	YKL165C	YFL019C	P43576	117 aa		3.12	□□□□□ -1.91
MCD4	YKL165C	FIT1	Q04433	528 aa		3.12	□□□□□ -1.91
MCD4	YKL165C	YLR112W	Q12130	139 aa		3.12	□□□□□ -1.91
MCD4	YKL165C	YNR034W-A	Q3E841	98 aa		3.12	□□□□□ -1.91
MCD4	YKL165C	CYB5	P40312	120 aa		3.11	□□□□□ -1.91
MCD4	YKL165C	EMC5	P40540	141 aa		3.11	□□□□□ -1.91
MCD4	YKL165C	MSL1	P40567	111 aa	Predicted RBP	3.11	□□□□□ -1.91
MCD4	YKL165C	EMC4	P53073	190 aa		3.11	□□□□□ -1.91
MCD4	YKL165C	YGL193C	P53097	103 aa		3.11	□□□□□ -1.91
MCD4	YKL165C	NMA2	P53204	395 aa		3.11	□□□□□ -1.91
MCD4	YKL165C	TDA8	Q6B2U8	126 aa		3.11	□□□□□ -1.91
MCD4	YKL165C	RAD6	P06104	172 aa		3.11	□□□□□ -1.91
MCD4	YKL165C	SYS1	P41544	203 aa		3.11	□□□□□ -1.91
MCD4	YKL165C	SMD3	P43321	101 aa	Known RBP	3.11	□□□□□ -1.91
MCD4	YKL165C	DSK2	P48510	373 aa		3.11	□□□□□ -1.91
MCD4	YKL165C	YDR102C	Q03864	110 aa		3.11	□□□□□ -1.91
MCD4	YKL165C	YMR090W	Q04304	227 aa	Known RBP	3.11	□□□□□ -1.91
MCD4	YKL165C	YPR145C-A	Q2V2P0	78 aa		3.11	□□□□□ -1.91
MCD4	YKL165C	RPA190	P10964	1664 aa	Known RBP	3.1	□□□□□ -1.91
MCD4	YKL165C	NSG1	P38837	291 aa		3.1	□□□□□ -1.91
MCD4	YKL165C	EDC2	P40023	145 aa	Predicted RBP	3.1	□□□□□ -1.91
MCD4	YKL165C	SDS23	P53172	527 aa		3.1	□□□□□ -1.91
MCD4	YKL165C	YGR164W	P53291	111 aa		3.1	□□□□□ -1.91
MCD4	YKL165C	SWT21	P53873	357 aa	Predicted RBP	3.1	□□□□□ -1.91
MCD4	YKL165C	SNX3	Q08826	162 aa	Known RBP	3.1	□□□□□ -1.91
MCD4	YKL165C	JID1	Q12350	301 aa		3.1	□□□□□ -1.91
MCD4	YKL165C	EAF3	Q12432	401 aa		3.1	□□□□□ -1.91
MCD4	YKL165C	RPO21	P04050	1733 aa	Known RBP	3.1	□□□□□ -1.91
MCD4	YKL165C	YNL320W	P42840	284 aa		3.1	□□□□□ -1.91
MCD4	YKL165C	TRS23	Q03784	219 aa		3.1	□□□□□ -1.91
MCD4	YKL165C	FYV12	Q08559	129 aa		3.1	□□□□□ -1.91
MCD4	YKL165C	DFM1	Q12743	341 aa	Known RBP	3.1	□□□□□ -1.91
MCD4	YKL165C	CDC25	P04821	1589 aa		3.09	□□□□□ -1.91
MCD4	YKL165C	RPL23A	P0CX41	137 aa	Known RBP	3.09	□□□□□ -1.91
MCD4	YKL165C	RPL23B	P0CX42	137 aa	Known RBP	3.09	□□□□□ -1.91
MCD4	YKL165C	UBC4	P15731	148 aa		3.09	□□□□□ -1.91
MCD4	YKL165C	YCR024C-B	Q3E7Z8	88 aa		3.09	□□□□□ -1.91
MCD4	YKL165C	STU1	P38198	1513 aa		3.09	□□□□□ -1.92
MCD4	YKL165C	AIM26	P32858	118 aa		3.09	□□□□□ -1.92
MCD4	YKL165C	YER135C	P40082	130 aa		3.09	□□□□□ -1.92
MCD4	YKL165C	NRM1	P53718	249 aa		3.09	□□□□□ -1.92
MCD4	YKL165C	ATG2	P53855	1592 aa		3.09	□□□□□ -1.92
MCD4	YKL165C	MLP1	Q02455	1875 aa	Known RBP	3.09	□□□□□ -1.92
MCD4	YKL165C	LAA1	P39526	2014 aa		3.08	□□□□□ -1.92
MCD4	YKL165C	RPS25B	P0C0T4	108 aa	Known RBP	3.08	□□□□□ -1.92
MCD4	YKL165C	ERG4	P25340	473 aa		3.08	□□□□□ -1.92
MCD4	YKL165C	YCR006C	P25350	157 aa		3.08	□□□□□ -1.92
MCD4	YKL165C	YCR085W	P25650	117 aa		3.08	□□□□□ -1.92
MCD4	YKL165C	RPL16A	P26784	199 aa	Known RBP	3.08	□□□□□ -1.92
MCD4	YKL165C	PHO89	P38361	574 aa		3.08	□□□□□ -1.92
MCD4	YKL165C	HTD2	P38790	280 aa	Known RBP	3.08	□□□□□ -1.92
MCD4	YKL165C	YHR138C	P38841	114 aa	Predicted RBP	3.08	□□□□□ -1.92
MCD4	YKL165C	VTC1	P40046	129 aa	RIP-Chip data	3.08	□□□□□ -1.92	RIP-Chip
MCD4	YKL165C	LPP1	Q04396	274 aa		3.08	□□□□□ -1.92
MCD4	YKL165C	USV1	Q12132	391 aa		3.08	□□□□□ -1.92
MCD4	YKL165C	NPC2	Q12408	173 aa		3.08	□□□□□ -1.92
MCD4	YKL165C	RPS25A	Q3E792	108 aa	Predicted RBP	3.08	□□□□□ -1.92
MCD4	YKL165C	TY4B-H	P0C2J7	1802 aa		3.08	□□□□□ -1.92
MCD4	YKL165C	ATG8	P38182	117 aa	RIP-Chip data	3.08	□□□□□ -1.92	not detected
MCD4	YKL165C	PHO88	P38264	188 aa	Predicted RBP	3.08	□□□□□ -1.92
MCD4	YKL165C	YFR035C	P43608	114 aa		3.08	□□□□□ -1.92
MCD4	YKL165C	PIR5	P46999	287 aa		3.08	□□□□□ -1.92
MCD4	YKL165C	CYT2	Q00873	224 aa		3.08	□□□□□ -1.92
MCD4	YKL165C	DUR1,2	P32528	1835 aa	Known RBP	3.08	□□□□□ -1.92
MCD4	YKL165C	RAS2	P01120	322 aa	Known RBP	3.07	□□□□□ -1.92
MCD4	YKL165C	ATP15	P21306	62 aa		3.07	□□□□□ -1.92
MCD4	YKL165C	UTR5	P32630	166 aa		3.07	□□□□□ -1.92
MCD4	YKL165C	MID2	P36027	376 aa		3.07	□□□□□ -1.92
MCD4	YKL165C	YNL198C	P40166	100 aa		3.07	□□□□□ -1.92
MCD4	YKL165C	YOL014W	Q08110	124 aa		3.07	□□□□□ -1.92
MCD4	YKL165C	YPR011C	Q12251	326 aa		3.07	□□□□□ -1.92
MCD4	YKL165C	AGA1	P32323	725 aa		3.07	□□□□□ -1.92
MCD4	YKL165C	YHL042W	P38729	150 aa		3.07	□□□□□ -1.92
MCD4	YKL165C	SMX2	P40204	77 aa	Known RBP	3.07	□□□□□ -1.92
MCD4	YKL165C	CAX4	P53223	239 aa		3.07	□□□□□ -1.92
MCD4	YKL165C	NIP7	Q08962	181 aa	Known RBP	3.07	□□□□□ -1.92
MCD4	YKL165C	YAL063C-A	Q3E791	96 aa		3.07	□□□□□ -1.92
MCD4	YKL165C	NTE1	Q04958	1679 aa		3.07	□□□□□ -1.92
MCD4	YKL165C	YCR099C	P25657	155 aa		3.06	□□□□□ -1.92
MCD4	YKL165C	YND1	P40009	630 aa		3.06	□□□□□ -1.92
MCD4	YKL165C	RRT7	Q07829	113 aa		3.06	□□□□□ -1.92
MCD4	YKL165C	DAD1	Q12248	94 aa		3.06	□□□□□ -1.92
MCD4	YKL165C	TIM22	Q12328	207 aa		3.06	□□□□□ -1.92
MCD4	YKL165C	YML100W-A	Q8TGT0	57 aa		3.06	□□□□□ -1.92
MCD4	YKL165C	UBR1	P19812	1950 aa		3.06	□□□□□ -1.92
MCD4	YKL165C	SPO14	P36126	1683 aa		3.06	□□□□□ -1.92
MCD4	YKL165C	USO1	P25386	1790 aa		3.06	□□□□□ -1.92
MCD4	YKL165C	SNQ2	P32568	1501 aa	Known RBP	3.06	□□□□□ -1.92
MCD4	YKL165C	SNF11	P38956	169 aa		3.06	□□□□□ -1.92
MCD4	YKL165C	EMI1	Q04406	187 aa		3.06	□□□□□ -1.92
MCD4	YKL165C	COA6	Q3E846	104 aa		3.06	□□□□□ -1.92
MCD4	YKL165C	MYO1	P08964	1928 aa		3.06	□□□□□ -1.92
MCD4	YKL165C	CYC1	P00044	109 aa	Predicted RBP	3.06	□□□□□ -1.92
MCD4	YKL165C	URA10	P30402	227 aa		3.06	□□□□□ -1.92
MCD4	YKL165C	GPI18	P38211	433 aa		3.06	□□□□□ -1.92
MCD4	YKL165C	YMR316C-A	I2HB70	103 aa		3.05	□□□□□ -1.92

Retrieved 100 of 5,963 RNA–protein pairs in 20.4 ms