RNA–Protein interactions for RNA: YJL097W

PHS1, Transcript of Essential 3-hydroxyacyl-CoA dehydratase of the ER membrane, yeast

Gene PHS1, Length 654 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PHS1	YJL097W	CWC23	P52868	283 aa	Predicted RBP	0.52	□□□□□ -2.33
PHS1	YJL097W	GET1	P53192	235 aa		0.52	□□□□□ -2.33
PHS1	YJL097W	YNR064C	P53750	290 aa		0.52	□□□□□ -2.33
PHS1	YJL097W	PHO85	P17157	305 aa		0.51	□□□□□ -2.33
PHS1	YJL097W	UBC8	P28263	218 aa		0.51	□□□□□ -2.33
PHS1	YJL097W	OCH1	P31755	480 aa		0.51	□□□□□ -2.33
PHS1	YJL097W	UGX2	P32772	223 aa		0.51	□□□□□ -2.33
PHS1	YJL097W	YCR087C-A	P37263	153 aa		0.51	□□□□□ -2.33
PHS1	YJL097W	RPS29A	P41057	56 aa	Known RBP	0.51	□□□□□ -2.33
PHS1	YJL097W	CCC1	P47818	322 aa		0.51	□□□□□ -2.33
PHS1	YJL097W	HOP2	P53187	214 aa		0.51	□□□□□ -2.33
PHS1	YJL097W	LSM3	P57743	89 aa	Known RBP	0.51	□□□□□ -2.33
PHS1	YJL097W	DYN3	Q04949	312 aa		0.51	□□□□□ -2.33
PHS1	YJL097W	GRE1	Q08969	168 aa		0.51	□□□□□ -2.33
PHS1	YJL097W	YDR010C	Q12426	110 aa		0.51	□□□□□ -2.33
PHS1	YJL097W	EFG1	Q3E705	233 aa	Known RBP	0.51	□□□□□ -2.33
PHS1	YJL097W	COA3	Q3E7B2	85 aa		0.51	□□□□□ -2.33
PHS1	YJL097W	CDC33	P07260	213 aa	Known RBP	0.5	□□□□□ -2.33
PHS1	YJL097W	SEC14	P24280	304 aa	Known RBP	0.5	□□□□□ -2.33
PHS1	YJL097W	SUA7	P29055	345 aa	Predicted RBP	0.5	□□□□□ -2.33
PHS1	YJL097W	FES1	P38260	290 aa		0.5	□□□□□ -2.33
PHS1	YJL097W	YHL018W	P38744	120 aa	Predicted RBP	0.5	□□□□□ -2.33
PHS1	YJL097W	AIM2	P39721	246 aa		0.5	□□□□□ -2.33
PHS1	YJL097W	YEL008W	P40001	126 aa		0.5	□□□□□ -2.33
PHS1	YJL097W	APQ12	P40532	138 aa		0.5	□□□□□ -2.33
PHS1	YJL097W	MSS2	P40990	351 aa		0.5	□□□□□ -2.33
PHS1	YJL097W	GEP7	P53171	287 aa		0.5	□□□□□ -2.33
PHS1	YJL097W	NOP19	P53317	196 aa	Predicted RBP	0.5	□□□□□ -2.33
PHS1	YJL097W	YMR295C	Q03559	197 aa		0.5	□□□□□ -2.33
PHS1	YJL097W	YDR391C	Q04170	232 aa		0.5	□□□□□ -2.33
PHS1	YJL097W	IRC23	Q08416	157 aa		0.5	□□□□□ -2.33
PHS1	YJL097W	FIT3	Q08907	204 aa		0.5	□□□□□ -2.33
PHS1	YJL097W	MATALPHA2	P0CY08	210 aa		0.49	□□□□□ -2.33
PHS1	YJL097W	HMLALPHA2	P0CY09	210 aa		0.49	□□□□□ -2.33
PHS1	YJL097W	GCY1	P14065	312 aa	Known RBP RIP-Chip data	0.49	□□□□□ -2.33	not detected
PHS1	YJL097W	SEN2	P16658	377 aa		0.49	□□□□□ -2.33
PHS1	YJL097W	ANB1	P19211	157 aa		0.49	□□□□□ -2.33
PHS1	YJL097W	CNB1	P25296	175 aa		0.49	□□□□□ -2.33
PHS1	YJL097W	FMP23	P38231	175 aa		0.49	□□□□□ -2.33
PHS1	YJL097W	YBR242W	P38331	238 aa		0.49	□□□□□ -2.33
PHS1	YJL097W	IKI1	P38874	309 aa		0.49	□□□□□ -2.33
PHS1	YJL097W	AIM18	P38884	321 aa		0.49	□□□□□ -2.33
PHS1	YJL097W	BNA7	Q04066	261 aa		0.49	□□□□□ -2.33
PHS1	YJL097W	YPR203W	Q08994	102 aa		0.49	□□□□□ -2.33
PHS1	YJL097W	COX8	P04039	78 aa		0.48	□□□□□ -2.33
PHS1	YJL097W	YPK2	P18961	677 aa		0.48	□□□□□ -2.33
PHS1	YJL097W	SFK1	P35735	353 aa		0.48	□□□□□ -2.33
PHS1	YJL097W	YER134C	P40081	178 aa		0.48	□□□□□ -2.33
PHS1	YJL097W	YNL200C	P40165	246 aa	Known RBP	0.48	□□□□□ -2.33
PHS1	YJL097W	SER2	P42941	309 aa		0.48	□□□□□ -2.33
PHS1	YJL097W	SKI6	P46948	246 aa	Predicted RBP	0.48	□□□□□ -2.33
PHS1	YJL097W	APS3	P47064	194 aa		0.48	□□□□□ -2.33
PHS1	YJL097W	THG1	P53215	237 aa	Known RBP	0.48	□□□□□ -2.33
PHS1	YJL097W	RTC4	P53850	401 aa		0.48	□□□□□ -2.33
PHS1	YJL097W	YMR099C	Q03161	297 aa	Known RBP	0.48	□□□□□ -2.33
PHS1	YJL097W	UPS3	Q04006	179 aa		0.48	□□□□□ -2.33
PHS1	YJL097W	SHH3	Q04487	196 aa		0.48	□□□□□ -2.33
PHS1	YJL097W	RNH202	Q05635	350 aa		0.48	□□□□□ -2.33
PHS1	YJL097W	GGA1	Q06336	557 aa		0.48	□□□□□ -2.33
PHS1	YJL097W	FIT2	Q08906	153 aa		0.48	□□□□□ -2.33
PHS1	YJL097W	YPR013C	Q12145	317 aa		0.48	□□□□□ -2.33
PHS1	YJL097W	YAR023C	D6VPM8	179 aa		0.47	□□□□□ -2.33
PHS1	YJL097W	MBF1	O14467	151 aa	Known RBP	0.47	□□□□□ -2.33
PHS1	YJL097W	YCR099C	P25657	155 aa		0.47	□□□□□ -2.33
PHS1	YJL097W	GCN20	P43535	752 aa	Known RBP	0.47	□□□□□ -2.33
PHS1	YJL097W	VPS55	P47111	140 aa		0.47	□□□□□ -2.33
PHS1	YJL097W	NCE101	Q02820	53 aa		0.47	□□□□□ -2.33
PHS1	YJL097W	YHP1	Q04116	353 aa		0.47	□□□□□ -2.33
PHS1	YJL097W	YMR226C	Q05016	267 aa	Known RBP	0.47	□□□□□ -2.33
PHS1	YJL097W	RUD3	Q12234	484 aa	Known RBP	0.47	□□□□□ -2.33
PHS1	YJL097W	ARG80	P07249	177 aa		0.46	□□□□□ -2.34
PHS1	YJL097W	TRX3	P25372	127 aa		0.46	□□□□□ -2.34
PHS1	YJL097W	RFA3	P26755	122 aa	Known RBP	0.46	□□□□□ -2.34
PHS1	YJL097W	ARO7	P32178	256 aa		0.46	□□□□□ -2.34
PHS1	YJL097W	NSG1	P38837	291 aa		0.46	□□□□□ -2.34
PHS1	YJL097W	MTW1	P39731	289 aa		0.46	□□□□□ -2.34
PHS1	YJL097W	YMR315W	Q04869	349 aa	Known RBP	0.46	□□□□□ -2.34
PHS1	YJL097W	NKP2	Q06162	153 aa		0.46	□□□□□ -2.34
PHS1	YJL097W	YOL014W	Q08110	124 aa		0.46	□□□□□ -2.34
PHS1	YJL097W	BRX1	Q08235	291 aa	Known RBP	0.46	□□□□□ -2.34
PHS1	YJL097W	FMP49	A0A023PZB3	126 aa		0.45	□□□□□ -2.34
PHS1	YJL097W	HTB1	P02293	131 aa	Known RBP	0.45	□□□□□ -2.34
PHS1	YJL097W	HTB2	P02294	131 aa		0.45	□□□□□ -2.34
PHS1	YJL097W	DDR48	P18899	430 aa	Known RBP	0.45	□□□□□ -2.34
PHS1	YJL097W	GSP2	P32836	220 aa	Known RBP	0.45	□□□□□ -2.34
PHS1	YJL097W	PAM17	P36147	197 aa		0.45	□□□□□ -2.34
PHS1	YJL097W	MPC2	P38857	129 aa		0.45	□□□□□ -2.34
PHS1	YJL097W	ARP3	P47117	449 aa	Known RBP	0.45	□□□□□ -2.34
PHS1	YJL097W	HOR7	Q05827	59 aa		0.45	□□□□□ -2.34
PHS1	YJL097W	FCY1	Q12178	158 aa		0.45	□□□□□ -2.34
PHS1	YJL097W	YMR105W-A	Q8TGS8	64 aa		0.45	□□□□□ -2.34
PHS1	YJL097W	YML100W-A	Q8TGT0	57 aa		0.45	□□□□□ -2.34
PHS1	YJL097W	MRS1	P07266	363 aa		0.44	□□□□□ -2.34
PHS1	YJL097W	ASF2	P32448	525 aa	Predicted RBP	0.44	□□□□□ -2.34
PHS1	YJL097W	VPS51	P36116	164 aa		0.44	□□□□□ -2.34
PHS1	YJL097W	MAK5	P38112	773 aa	Predicted RBP	0.44	□□□□□ -2.34
PHS1	YJL097W	YNL033W	P53964	284 aa		0.44	□□□□□ -2.34
PHS1	YJL097W	MET31	Q03081	177 aa		0.44	□□□□□ -2.34
PHS1	YJL097W	PRM3	Q08931	133 aa		0.44	□□□□□ -2.34
PHS1	YJL097W	MHF1	Q3E835	90 aa		0.44	□□□□□ -2.34

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