RNA–Protein interactions for RNA: YFR010W

UBP6, Transcript of Ubiquitin-specific protease, yeast

Gene UBP6, Length 1,500 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBP6	YFR010W	RPL9B	P51401	191 aa	Known RBP	3.18	□□□□□ -1.9
UBP6	YFR010W	RSM10	Q03201	203 aa		3.18	□□□□□ -1.9
UBP6	YFR010W	MRPS8	Q03799	155 aa		3.18	□□□□□ -1.9
UBP6	YFR010W	TVP15	Q03860	143 aa		3.18	□□□□□ -1.9
UBP6	YFR010W	API2	Q04413	109 aa		3.18	□□□□□ -1.9
UBP6	YFR010W	FEX1	Q08913	375 aa		3.18	□□□□□ -1.9
UBP6	YFR010W	FEX2	Q08991	375 aa		3.18	□□□□□ -1.9
UBP6	YFR010W	KSH1	Q8TGJ3	72 aa		3.18	□□□□□ -1.9
UBP6	YFR010W	MDH2	P22133	377 aa		3.17	□□□□□ -1.9
UBP6	YFR010W	YDR274C	P87283	123 aa		3.17	□□□□□ -1.9
UBP6	YFR010W	YDR115W	Q04598	105 aa		3.17	□□□□□ -1.9
UBP6	YFR010W	UBC4	P15731	148 aa		3.16	□□□□□ -1.9
UBP6	YFR010W	YET1	P35723	206 aa		3.16	□□□□□ -1.9
UBP6	YFR010W	MRPL11	P36521	249 aa	Predicted RBP	3.16	□□□□□ -1.9
UBP6	YFR010W	UMP1	P38293	148 aa		3.16	□□□□□ -1.9
UBP6	YFR010W	FLX1	P40464	311 aa		3.16	□□□□□ -1.9
UBP6	YFR010W	YFR035C	P43608	114 aa		3.16	□□□□□ -1.9
UBP6	YFR010W	YGL118C	P53132	145 aa		3.16	□□□□□ -1.9
UBP6	YFR010W	MPC1	P53157	130 aa	Known RBP	3.16	□□□□□ -1.9
UBP6	YFR010W	YMR082C	Q04276	118 aa		3.16	□□□□□ -1.9
UBP6	YFR010W	SEN15	Q04675	128 aa		3.16	□□□□□ -1.9
UBP6	YFR010W	RAF1	Q06891	181 aa		3.16	□□□□□ -1.9
UBP6	YFR010W	CSI2	Q08054	341 aa		3.16	□□□□□ -1.9
UBP6	YFR010W	DFM1	Q12743	341 aa	Known RBP	3.16	□□□□□ -1.9
UBP6	YFR010W	PAN1	P32521	1480 aa		3.16	□□□□□ -1.9
UBP6	YFR010W	TY1B-NL2	Q99337	1749 aa	Known RBP	3.16	□□□□□ -1.9
UBP6	YFR010W	BNI1	P41832	1953 aa		3.15	□□□□□ -1.9
UBP6	YFR010W	ECM12	O13529	151 aa		3.15	□□□□□ -1.9
UBP6	YFR010W	GPI18	P38211	433 aa		3.15	□□□□□ -1.9
UBP6	YFR010W	YHL042W	P38729	150 aa		3.15	□□□□□ -1.9
UBP6	YFR010W	ASP1	P38986	381 aa	Predicted RBP	3.15	□□□□□ -1.9
UBP6	YFR010W	DSK2	P48510	373 aa		3.15	□□□□□ -1.9
UBP6	YFR010W	SCW4	P53334	386 aa	Known RBP	3.15	□□□□□ -1.9
UBP6	YFR010W	SCS22	Q6Q595	175 aa		3.15	□□□□□ -1.9
UBP6	YFR010W	POR1	P04840	283 aa	Known RBP	3.14	□□□□□ -1.91
UBP6	YFR010W	MAK31	P23059	88 aa		3.14	□□□□□ -1.91
UBP6	YFR010W	SDH3	P33421	198 aa		3.14	□□□□□ -1.91
UBP6	YFR010W	RRT1	P38192	103 aa		3.14	□□□□□ -1.91
UBP6	YFR010W	LSM2	P38203	95 aa	Known RBP	3.14	□□□□□ -1.91
UBP6	YFR010W	CTR2	P38865	189 aa		3.14	□□□□□ -1.91
UBP6	YFR010W	YEL073C	P39974	107 aa		3.14	□□□□□ -1.91
UBP6	YFR010W	TDA2	P40045	126 aa		3.14	□□□□□ -1.91
UBP6	YFR010W	ERG25	P53045	309 aa		3.14	□□□□□ -1.91
UBP6	YFR010W	YGR026W	P53217	278 aa		3.14	□□□□□ -1.91
UBP6	YFR010W	HAL1	Q01766	294 aa		3.14	□□□□□ -1.91
UBP6	YFR010W	LIP1	Q03579	150 aa		3.14	□□□□□ -1.91
UBP6	YFR010W	ECM19	Q06011	112 aa		3.14	□□□□□ -1.91
UBP6	YFR010W	DUR1,2	P32528	1835 aa	Known RBP	3.14	□□□□□ -1.91
UBP6	YFR010W	SCC2	Q04002	1493 aa		3.14	□□□□□ -1.91
UBP6	YFR010W	ASK1	P35734	292 aa		3.14	□□□□□ -1.91
UBP6	YFR010W	SNF11	P38956	169 aa		3.14	□□□□□ -1.91
UBP6	YFR010W	EMC5	P40540	141 aa		3.14	□□□□□ -1.91
UBP6	YFR010W	MSL1	P40567	111 aa	Predicted RBP	3.14	□□□□□ -1.91
UBP6	YFR010W	PIN3	Q06449	215 aa		3.14	□□□□□ -1.91
UBP6	YFR010W	YOL029C	Q08187	201 aa		3.14	□□□□□ -1.91
UBP6	YFR010W	HRT1	Q08273	121 aa		3.14	□□□□□ -1.91
UBP6	YFR010W	SRL1	Q08673	210 aa		3.14	□□□□□ -1.91
UBP6	YFR010W	YHR213W-A	Q8TGT4	77 aa		3.14	□□□□□ -1.91
UBP6	YFR010W	YOL162W	P0CF19	215 aa		3.13	□□□□□ -1.91
UBP6	YFR010W	RPB9	P27999	122 aa		3.13	□□□□□ -1.91
UBP6	YFR010W	YKL044W	P36092	106 aa		3.13	□□□□□ -1.91
UBP6	YFR010W	YHR125W	P38831	101 aa		3.13	□□□□□ -1.91
UBP6	YFR010W	TVP23	P38962	199 aa		3.13	□□□□□ -1.91
UBP6	YFR010W	YIL054W	P40524	105 aa		3.13	□□□□□ -1.91
UBP6	YFR010W	PIR5	P46999	287 aa		3.13	□□□□□ -1.91
UBP6	YFR010W	DAN1	P47178	298 aa		3.13	□□□□□ -1.91
UBP6	YFR010W	CAX4	P53223	239 aa		3.13	□□□□□ -1.91
UBP6	YFR010W	UPS3	Q04006	179 aa		3.13	□□□□□ -1.91
UBP6	YFR010W	RIM9	Q04734	239 aa		3.13	□□□□□ -1.91
UBP6	YFR010W	YOR385W	Q08909	290 aa		3.13	□□□□□ -1.91
UBP6	YFR010W	COA6	Q3E846	104 aa		3.13	□□□□□ -1.91
UBP6	YFR010W	MIC10	Q96VH5	97 aa		3.13	□□□□□ -1.91
UBP6	YFR010W	TY3B-I	Q7LHG5	1498 aa	Known RBP	3.12	□□□□□ -1.91
UBP6	YFR010W	INO4	P13902	151 aa		3.12	□□□□□ -1.91
UBP6	YFR010W	YBR013C	P38215	129 aa		3.12	□□□□□ -1.91
UBP6	YFR010W	PHO88	P38264	188 aa	Predicted RBP	3.12	□□□□□ -1.91
UBP6	YFR010W	KNH1	P50112	268 aa		3.12	□□□□□ -1.91
UBP6	YFR010W	YLR365W	Q7LIF2	110 aa		3.12	□□□□□ -1.91
UBP6	YFR010W	TCB3	Q03640	1545 aa	Known RBP	3.12	□□□□□ -1.91
UBP6	YFR010W	YFR010W-A	P0C5N0	62 aa		3.11	□□□□□ -1.91
UBP6	YFR010W	CWP2	P43497	92 aa		3.11	□□□□□ -1.91
UBP6	YFR010W	THG1	P53215	237 aa	Known RBP	3.11	□□□□□ -1.91
UBP6	YFR010W	MPC3	P53311	146 aa		3.11	□□□□□ -1.91
UBP6	YFR010W	YMR295C	Q03559	197 aa		3.11	□□□□□ -1.91
UBP6	YFR010W	IRC25	Q07951	179 aa		3.11	□□□□□ -1.91
UBP6	YFR010W	YOS1	Q3E834	85 aa		3.11	□□□□□ -1.91
UBP6	YFR010W	UBR1	P19812	1950 aa		3.11	□□□□□ -1.91
UBP6	YFR010W	SWD3	P38123	315 aa		3.1	□□□□□ -1.91
UBP6	YFR010W	YNL217W	P40152	326 aa		3.1	□□□□□ -1.91
UBP6	YFR010W	ECO1	P43605	281 aa		3.1	□□□□□ -1.91
UBP6	YFR010W	MZM1	Q03429	123 aa	Predicted RBP	3.1	□□□□□ -1.91
UBP6	YFR010W	YOR381W-A	Q3E804	55 aa		3.1	□□□□□ -1.91
UBP6	YFR010W	ATG40	Q99325	256 aa		3.1	□□□□□ -1.91
UBP6	YFR010W	YRF1-2	P40105	1681 aa		3.1	□□□□□ -1.91
UBP6	YFR010W	TY1B-DR5	P0C2I2	1755 aa		3.1	□□□□□ -1.91
UBP6	YFR010W	TY1B-DR6	P0C2I3	1755 aa		3.1	□□□□□ -1.91
UBP6	YFR010W	TY1B-LR2	P0C2I5	1755 aa		3.1	□□□□□ -1.91
UBP6	YFR010W	TY1B-LR3	P0C2I6	1755 aa	Known RBP	3.1	□□□□□ -1.91
UBP6	YFR010W	TY1B-PR1	P0C2I9	1755 aa	Known RBP	3.1	□□□□□ -1.91
UBP6	YFR010W	TY1B-PR3	P0C2J1	1755 aa	Known RBP	3.1	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 64.1 ms