RNA–Protein interactions for RNA: YBL022C

PIM1, Transcript of ATP-dependent Lon protease, yeast

Gene PIM1, Length 3,402 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PIM1	YBL022C	RFA3	P26755	122 aa	Known RBP	3.38	□□□□□ -1.87
PIM1	YBL022C	YKL044W	P36092	106 aa		3.38	□□□□□ -1.87
PIM1	YBL022C	PET8	P38921	284 aa		3.38	□□□□□ -1.87
PIM1	YBL022C	TIF34	P40217	347 aa	Known RBP	3.38	□□□□□ -1.87
PIM1	YBL022C	BRR6	P53062	197 aa		3.38	□□□□□ -1.87
PIM1	YBL022C	CRZ1	P53968	678 aa		3.38	□□□□□ -1.87
PIM1	YBL022C	YLR460C	P54007	376 aa		3.38	□□□□□ -1.87
PIM1	YBL022C	FCF1	Q05498	189 aa	Predicted RBP	3.38	□□□□□ -1.87
PIM1	YBL022C	RPL1A	P0CX43	217 aa	Known RBP	3.37	□□□□□ -1.87
PIM1	YBL022C	RPL1B	P0CX44	217 aa	Known RBP	3.37	□□□□□ -1.87
PIM1	YBL022C	FRM2	P37261	193 aa		3.37	□□□□□ -1.87
PIM1	YBL022C	DER1	P38307	211 aa		3.37	□□□□□ -1.87
PIM1	YBL022C	UBC11	P52492	156 aa		3.37	□□□□□ -1.87
PIM1	YBL022C	YMR178W	Q03219	274 aa	Known RBP	3.37	□□□□□ -1.87
PIM1	YBL022C	GEP3	Q08622	556 aa		3.37	□□□□□ -1.87
PIM1	YBL022C	YPS3	Q12303	508 aa		3.37	□□□□□ -1.87
PIM1	YBL022C	YLR415C	O13578	112 aa		3.37	□□□□□ -1.87
PIM1	YBL022C	PHO85	P17157	305 aa		3.37	□□□□□ -1.87
PIM1	YBL022C	GPI18	P38211	433 aa		3.37	□□□□□ -1.87
PIM1	YBL022C	YER079W	P40052	210 aa	Known RBP	3.37	□□□□□ -1.87
PIM1	YBL022C	YJR096W	P47137	282 aa		3.37	□□□□□ -1.87
PIM1	YBL022C	VEL1	P53058	206 aa		3.37	□□□□□ -1.87
PIM1	YBL022C	YGL118C	P53132	145 aa		3.37	□□□□□ -1.87
PIM1	YBL022C	RPL35A	P0CX84	120 aa	Known RBP	3.37	□□□□□ -1.87
PIM1	YBL022C	RPL35B	P0CX85	120 aa	Known RBP	3.37	□□□□□ -1.87
PIM1	YBL022C	FZF1	P32805	299 aa		3.37	□□□□□ -1.87
PIM1	YBL022C	MRPL24	P36525	258 aa	Predicted RBP	3.37	□□□□□ -1.87
PIM1	YBL022C	EGT2	P42835	1041 aa		3.37	□□□□□ -1.87
PIM1	YBL022C	CIS3	P47001	227 aa		3.37	□□□□□ -1.87
PIM1	YBL022C	EAF6	P47128	113 aa		3.37	□□□□□ -1.87
PIM1	YBL022C	ALG13	P53178	202 aa		3.37	□□□□□ -1.87
PIM1	YBL022C	MRX11	Q03079	207 aa		3.37	□□□□□ -1.87
PIM1	YBL022C	ECM18	Q04623	453 aa		3.37	□□□□□ -1.87
PIM1	YBL022C	YMR317W	Q04893	1140 aa		3.37	□□□□□ -1.87
PIM1	YBL022C	SWT1	Q12104	458 aa		3.37	□□□□□ -1.87
PIM1	YBL022C	NPC2	Q12408	173 aa		3.37	□□□□□ -1.87
PIM1	YBL022C	VPS13	Q07878	3144 aa		3.36	□□□□□ -1.87
PIM1	YBL022C	STE18	P18852	110 aa		3.36	□□□□□ -1.87
PIM1	YBL022C	YPS1	P32329	569 aa		3.36	□□□□□ -1.87
PIM1	YBL022C	FET4	P40988	552 aa		3.36	□□□□□ -1.87
PIM1	YBL022C	PRY1	P47032	299 aa		3.36	□□□□□ -1.87
PIM1	YBL022C	HST4	P53688	370 aa		3.36	□□□□□ -1.87
PIM1	YBL022C	RPL7B	Q12213	244 aa	Known RBP	3.36	□□□□□ -1.87
PIM1	YBL022C	YBL112C	Q3E7Y4	105 aa		3.36	□□□□□ -1.87
PIM1	YBL022C	INO4	P13902	151 aa		3.36	□□□□□ -1.87
PIM1	YBL022C	TIM18	Q08749	192 aa		3.36	□□□□□ -1.87
PIM1	YBL022C	YLR111W	Q12528	110 aa		3.36	□□□□□ -1.87
PIM1	YBL022C	YIL089W	P40500	205 aa		3.35	□□□□□ -1.87
PIM1	YBL022C	OYE3	P41816	400 aa	Predicted RBP	3.35	□□□□□ -1.87
PIM1	YBL022C	XYL2	Q07993	356 aa		3.35	□□□□□ -1.87
PIM1	YBL022C	YOR292C	Q08743	309 aa		3.35	□□□□□ -1.87
PIM1	YBL022C	YMR175W-A	Q3E766	64 aa		3.35	□□□□□ -1.87
PIM1	YBL022C	SFT2	P38166	215 aa		3.35	□□□□□ -1.87
PIM1	YBL022C	YPI1	P43587	155 aa		3.35	□□□□□ -1.87
PIM1	YBL022C	NCE103	P53615	221 aa		3.35	□□□□□ -1.87
PIM1	YBL022C	MRPL23	Q12487	163 aa	Predicted RBP	3.35	□□□□□ -1.87
PIM1	YBL022C	YFL041W-A	Q3E817	63 aa		3.35	□□□□□ -1.87
PIM1	YBL022C	Q0255	P03881	472 aa		3.35	□□□□□ -1.87
PIM1	YBL022C	MST28	P39552	234 aa		3.35	□□□□□ -1.87
PIM1	YBL022C	CCS1	P40202	249 aa	Known RBP	3.35	□□□□□ -1.87
PIM1	YBL022C	YFR054C	P43622	192 aa		3.35	□□□□□ -1.87
PIM1	YBL022C	YNR071C	P53757	342 aa		3.35	□□□□□ -1.87
PIM1	YBL022C	WSC2	P53832	503 aa		3.35	□□□□□ -1.87
PIM1	YBL022C	YIL014C-A	Q02598	104 aa		3.35	□□□□□ -1.87
PIM1	YBL022C	MRPL31	P14063	131 aa	Predicted RBP	3.34	□□□□□ -1.87
PIM1	YBL022C	CTK2	P46962	323 aa		3.34	□□□□□ -1.87
PIM1	YBL022C	AIM34	Q03673	198 aa		3.34	□□□□□ -1.87
PIM1	YBL022C	MRPL20	P22354	195 aa	Predicted RBP	3.34	□□□□□ -1.87
PIM1	YBL022C	ATX1	P38636	73 aa		3.34	□□□□□ -1.87
PIM1	YBL022C	SHR5	P41912	237 aa		3.34	□□□□□ -1.87
PIM1	YBL022C	CAX4	P53223	239 aa		3.34	□□□□□ -1.87
PIM1	YBL022C	NCE101	Q02820	53 aa		3.34	□□□□□ -1.87
PIM1	YBL022C	FCY1	Q12178	158 aa		3.34	□□□□□ -1.87
PIM1	YBL022C	SWD3	P38123	315 aa		3.34	□□□□□ -1.88
PIM1	YBL022C	SGN1	P40561	250 aa	Known RBP RIP-Chip data	3.34	□□□□□ -1.88	not detected
PIM1	YBL022C	TDA4	P47153	279 aa		3.34	□□□□□ -1.88
PIM1	YBL022C	YIP1	P53039	248 aa		3.34	□□□□□ -1.88
PIM1	YBL022C	SDS23	P53172	527 aa		3.34	□□□□□ -1.88
PIM1	YBL022C	PCP1	P53259	346 aa		3.34	□□□□□ -1.88
PIM1	YBL022C	MGR2	Q02889	113 aa		3.34	□□□□□ -1.88
PIM1	YBL022C	SMT3	Q12306	101 aa	Known RBP	3.34	□□□□□ -1.88
PIM1	YBL022C	YCL021W-A	Q96VH3	125 aa		3.34	□□□□□ -1.88
PIM1	YBL022C	VMA11	P32842	164 aa		3.33	□□□□□ -1.88
PIM1	YBL022C	YKR032W	P36127	104 aa		3.33	□□□□□ -1.88
PIM1	YBL022C	LST8	P41318	303 aa		3.33	□□□□□ -1.88
PIM1	YBL022C	MIX14	Q04341	121 aa		3.33	□□□□□ -1.88
PIM1	YBL022C	MIM1	Q08176	113 aa		3.33	□□□□□ -1.88
PIM1	YBL022C	MPD1	Q12404	318 aa	Known RBP	3.33	□□□□□ -1.88
PIM1	YBL022C	YDR381C-A	Q3E6R5	114 aa		3.33	□□□□□ -1.88
PIM1	YBL022C	RPL23A	P0CX41	137 aa	Known RBP	3.33	□□□□□ -1.88
PIM1	YBL022C	RPL23B	P0CX42	137 aa	Known RBP	3.33	□□□□□ -1.88
PIM1	YBL022C	ATF1	P40353	525 aa		3.33	□□□□□ -1.88
PIM1	YBL022C	OGG1	P53397	376 aa	Predicted RBP	3.33	□□□□□ -1.88
PIM1	YBL022C	MOT3	P54785	490 aa	Known RBP	3.33	□□□□□ -1.88
PIM1	YBL022C	RPC11	Q04307	110 aa	Predicted RBP	3.33	□□□□□ -1.88
PIM1	YBL022C	YPT1	P01123	206 aa	Known RBP	3.32	□□□□□ -1.88
PIM1	YBL022C	FCY2	P17064	533 aa		3.32	□□□□□ -1.88
PIM1	YBL022C	UBS1	P38290	277 aa		3.32	□□□□□ -1.88
PIM1	YBL022C	OXA1	P39952	402 aa		3.32	□□□□□ -1.88
PIM1	YBL022C	UBC7	Q02159	165 aa		3.32	□□□□□ -1.88

Retrieved 100 of 5,963 RNA–protein pairs in 545.7 ms