RNA–Protein interactions for RNA: ENST00000490262.1

SREBF2-207, Transcript of sterol regulatory element binding transcription factor 2, humanhuman

TSL 2

Gene SREBF2, Length 450 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF2-207ENST00000490262 GAS6Q14393 721 aa12.71□□□□□ -0.37
SREBF2-207ENST00000490262 E2F4Q16254 413 aa12.71□□□□□ -0.37
SREBF2-207ENST00000490262 TXNDC11Q6PKC3 985 aa12.71□□□□□ -0.37
SREBF2-207ENST00000490262 STXBP4Q6ZWJ1 553 aa12.71□□□□□ -0.37
SREBF2-207ENST00000490262 TMEM150AQ86TG1 271 aa12.71□□□□□ -0.37
SREBF2-207ENST00000490262 RALGPS2Q86X27 583 aaPredicted RBP12.71□□□□□ -0.37
SREBF2-207ENST00000490262 CMTM8Q8IZV2 173 aa12.71□□□□□ -0.37
SREBF2-207ENST00000490262 TMEM86AQ8N2M4 240 aa12.71□□□□□ -0.37
SREBF2-207ENST00000490262 CELF5Q8N6W0 485 aaKnown RBP12.71□□□□□ -0.37
SREBF2-207ENST00000490262 GLIS3Q8NEA6 775 aa12.71□□□□□ -0.37
SREBF2-207ENST00000490262 TTC8Q8TAM2 541 aa12.71□□□□□ -0.37
SREBF2-207ENST00000490262 HPS3Q969F9 1004 aa12.71□□□□□ -0.37
SREBF2-207ENST00000490262 RMDN1Q96DB5 314 aa12.71□□□□□ -0.37
SREBF2-207ENST00000490262 PI4K2AQ9BTU6 479 aa12.71□□□□□ -0.37
SREBF2-207ENST00000490262 SMG9Q9H0W8 520 aaKnown RBP12.71□□□□□ -0.37
SREBF2-207ENST00000490262 KBTBD4Q9NVX7 518 aa12.71□□□□□ -0.37
SREBF2-207ENST00000490262 GDAP2Q9NXN4 497 aa12.71□□□□□ -0.37
SREBF2-207ENST00000490262 NCDNQ9UBB6 729 aa12.71□□□□□ -0.37
SREBF2-207ENST00000490262 TFIP11Q9UBB9 837 aaKnown RBP12.71□□□□□ -0.37
SREBF2-207ENST00000490262 SIX4Q9UIU6 781 aa12.71□□□□□ -0.37
SREBF2-207ENST00000490262 SNX9Q9Y5X1 595 aa12.71□□□□□ -0.37
SREBF2-207ENST00000490262 OBSL1O75147 1896 aa12.7□□□□□ -0.38
SREBF2-207ENST00000490262 F11P03951 625 aa12.7□□□□□ -0.38
SREBF2-207ENST00000490262 TMEM191BP0C7N4 346 aa12.7□□□□□ -0.38
SREBF2-207ENST00000490262 CSH1P0DML2 217 aa12.7□□□□□ -0.38
SREBF2-207ENST00000490262 CSH2P0DML3 217 aa12.7□□□□□ -0.38
SREBF2-207ENST00000490262 ACAT1P24752 427 aaKnown RBP12.7□□□□□ -0.38
SREBF2-207ENST00000490262 CXCL12P48061 93 aa12.7□□□□□ -0.38
SREBF2-207ENST00000490262 GPR15P49685 360 aa12.7□□□□□ -0.38
SREBF2-207ENST00000490262 PLCB2Q00722 1185 aa12.7□□□□□ -0.38
SREBF2-207ENST00000490262 SATB1Q01826 763 aa12.7□□□□□ -0.38
SREBF2-207ENST00000490262 TNK2Q07912 1038 aa12.7□□□□□ -0.38
SREBF2-207ENST00000490262 WDR44Q5JSH3 913 aa12.7□□□□□ -0.38
SREBF2-207ENST00000490262 INTS6LQ5JSJ4 861 aaKnown RBP12.7□□□□□ -0.38
SREBF2-207ENST00000490262 OSTM1Q86WC4 334 aa12.7□□□□□ -0.38
SREBF2-207ENST00000490262 SPEM1Q8N4L4 309 aa12.7□□□□□ -0.38
SREBF2-207ENST00000490262 TOP6BLQ8N6T0 577 aa12.7□□□□□ -0.38
SREBF2-207ENST00000490262 MAB21L3Q8N8X9 362 aa12.7□□□□□ -0.38
SREBF2-207ENST00000490262 STKLD1Q8NE28 680 aa12.7□□□□□ -0.38
SREBF2-207ENST00000490262 SPATA18Q8TC71 538 aa12.7□□□□□ -0.38
SREBF2-207ENST00000490262 LEO1Q8WVC0 666 aaPredicted RBP12.7□□□□□ -0.38
SREBF2-207ENST00000490262 ANKRD36BP1Q96IX9 119 aa12.7□□□□□ -0.38
SREBF2-207ENST00000490262 ZNF396Q96N95 335 aaPredicted RBP12.7□□□□□ -0.38
SREBF2-207ENST00000490262 PKMYT1Q99640 499 aa12.7□□□□□ -0.38
SREBF2-207ENST00000490262 TRIM9Q9C026 710 aa12.7□□□□□ -0.38
SREBF2-207ENST00000490262 MTMR12Q9C0I1 747 aa12.7□□□□□ -0.38
SREBF2-207ENST00000490262 CUEDC2Q9H467 287 aa12.7□□□□□ -0.38
SREBF2-207ENST00000490262 ABCB6Q9NP58 842 aa12.7□□□□□ -0.38
SREBF2-207ENST00000490262 RBM12Q9NTZ6 932 aaKnown RBP12.7□□□□□ -0.38
SREBF2-207ENST00000490262 INTS13Q9NVM9 706 aa12.7□□□□□ -0.38
SREBF2-207ENST00000490262 THG1LQ9NWX6 298 aaKnown RBP12.7□□□□□ -0.38
SREBF2-207ENST00000490262 GTF3C4Q9UKN8 822 aa12.7□□□□□ -0.38
SREBF2-207ENST00000490262 MAGED2Q9UNF1 606 aaPredicted RBP12.7□□□□□ -0.38
SREBF2-207ENST00000490262 SMG5Q9UPR3 1016 aaKnown RBP12.7□□□□□ -0.38
SREBF2-207ENST00000490262 ZNF233A6NK53 670 aa12.69□□□□□ -0.38
SREBF2-207ENST00000490262 SOBPA7XYQ1 873 aa12.69□□□□□ -0.38
SREBF2-207ENST00000490262 GABRDO14764 452 aa12.69□□□□□ -0.38
SREBF2-207ENST00000490262 CYP2F1P24903 491 aa12.69□□□□□ -0.38
SREBF2-207ENST00000490262 DDX6P26196 483 aaKnown RBP eCLIP12.69□□□□□ -0.38
SREBF2-207ENST00000490262 HOXD13P35453 343 aa12.69□□□□□ -0.38
SREBF2-207ENST00000490262 AVPR1AP37288 418 aa12.69□□□□□ -0.38
SREBF2-207ENST00000490262 LHX1P48742 406 aa12.69□□□□□ -0.38
SREBF2-207ENST00000490262 RPL10AP62906 217 aaKnown RBP12.69□□□□□ -0.38
SREBF2-207ENST00000490262 ASIC1P78348 528 aa12.69□□□□□ -0.38
SREBF2-207ENST00000490262 AMPD3Q01432 767 aa12.69□□□□□ -0.38
SREBF2-207ENST00000490262 MYO1EQ12965 1108 aa12.69□□□□□ -0.38
SREBF2-207ENST00000490262 PON2Q15165 354 aa12.69□□□□□ -0.38
SREBF2-207ENST00000490262 SURF1Q15526 300 aa12.69□□□□□ -0.38
SREBF2-207ENST00000490262 DDR2Q16832 855 aa12.69□□□□□ -0.38
SREBF2-207ENST00000490262 SOWAHAQ2M3V2 549 aa12.69□□□□□ -0.38
SREBF2-207ENST00000490262 ITPRIPL2Q3MIP1 535 aa12.69□□□□□ -0.38
SREBF2-207ENST00000490262 DGKKQ5KSL6 1271 aa12.69□□□□□ -0.38
SREBF2-207ENST00000490262 SDHAF4Q5VUM1 108 aa12.69□□□□□ -0.38
SREBF2-207ENST00000490262 LMBRD2Q68DH5 695 aaPredicted RBP12.69□□□□□ -0.38
SREBF2-207ENST00000490262 CBWD2Q8IUF1 395 aa12.69□□□□□ -0.38
SREBF2-207ENST00000490262 ADGRF2Q8IZF7 708 aa12.69□□□□□ -0.38
SREBF2-207ENST00000490262 IQUBQ8NA54 791 aa12.69□□□□□ -0.38
SREBF2-207ENST00000490262 OR5B17Q8NGF7 314 aa12.69□□□□□ -0.38
SREBF2-207ENST00000490262 MRPS31Q92665 395 aaKnown RBP12.69□□□□□ -0.38
SREBF2-207ENST00000490262 SECISBP2LQ93073 1101 aaKnown RBP12.69□□□□□ -0.38
SREBF2-207ENST00000490262 DHX58Q96C10 678 aa12.69□□□□□ -0.38
SREBF2-207ENST00000490262 FAM83CQ9BQN1 747 aa12.69□□□□□ -0.38
SREBF2-207ENST00000490262 GKN1Q9NS71 199 aa12.69□□□□□ -0.38
SREBF2-207ENST00000490262 CCL26Q9Y258 94 aa12.69□□□□□ -0.38
SREBF2-207ENST00000490262 R3HCC1Q9Y3T6 440 aaKnown RBP12.69□□□□□ -0.38
SREBF2-207ENST00000490262 PTPRJQ12913 1337 aa12.68□□□□□ -0.38
SREBF2-207ENST00000490262 CEP250Q9BV73 2442 aa12.68□□□□□ -0.38
SREBF2-207ENST00000490262 EIF3DO15371 548 aaKnown RBP eCLIP12.68□□□□□ -0.38
SREBF2-207ENST00000490262 HCRTO43612 131 aa12.68□□□□□ -0.38
SREBF2-207ENST00000490262 CUTAO60888 179 aa12.68□□□□□ -0.38
SREBF2-207ENST00000490262 YEATS4O95619 227 aa12.68□□□□□ -0.38
SREBF2-207ENST00000490262 TNNC2P02585 160 aa12.68□□□□□ -0.38
SREBF2-207ENST00000490262 PCSK1P29120 753 aa12.68□□□□□ -0.38
SREBF2-207ENST00000490262 CCINQ13939 588 aa12.68□□□□□ -0.38
SREBF2-207ENST00000490262 CCDC142Q17RM4 750 aa12.68□□□□□ -0.38
SREBF2-207ENST00000490262 DUOXA2Q1HG44 320 aa12.68□□□□□ -0.38
SREBF2-207ENST00000490262 CFAP221Q4G0U5 840 aa12.68□□□□□ -0.38
SREBF2-207ENST00000490262 TXNDC8Q6A555 127 aa12.68□□□□□ -0.38
SREBF2-207ENST00000490262 CNNM4Q6P4Q7 775 aa12.68□□□□□ -0.38
SREBF2-207ENST00000490262 SHC4Q6S5L8 630 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms