RNA–Protein interactions for RNA: ENST00000490262.1

SREBF2-207, Transcript of sterol regulatory element binding transcription factor 2, humanhuman

TSL 2

Gene SREBF2, Length 450 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF2-207ENST00000490262 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.59□□□□□ -0.711e-25■■■■■ 189.4
SREBF2-207ENST00000490262 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.46■□□□□ 0.551e-18■■■■■ 126.2
SREBF2-207ENST00000490262 EFTUD2Q15029 972 aaKnown RBP eCLIP11□□□□□ -0.658e-8■■■■■ 49
SREBF2-207ENST00000490262 SF3B1O75533 1304 aaKnown RBP eCLIP13.03□□□□□ -0.325e-6■■■■■ 31.3
SREBF2-207ENST00000490262 AQRO60306 1485 aaKnown RBP eCLIP21.45■■□□□ 1.021e-10■■■■□ 26.6
SREBF2-207ENST00000490262 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.51□□□□□ -0.412e-7■■■■□ 22
SREBF2-207ENST00000490262 SF3B4Q15427 424 aaKnown RBP eCLIP10.8□□□□□ -0.682e-10■■■■□ 21.3
SREBF2-207ENST00000490262 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.23□□□□□ -0.779e-10■■■■□ 19.6
SREBF2-207ENST00000490262 FXR2P51116 673 aaKnown RBP eCLIP13.06□□□□□ -0.321e-18■■■□□ 19
SREBF2-207ENST00000490262 METAP2P50579 478 aaKnown RBP eCLIP13.48□□□□□ -0.252e-6■■■□□ 18.8
SREBF2-207ENST00000490262 PPIGQ13427 754 aaKnown RBP eCLIP13.86□□□□□ -0.194e-6■■■□□ 15.4
SREBF2-207ENST00000490262 FKBP4Q02790 459 aaKnown RBP eCLIP15.51■□□□□ 0.073e-6■■■□□ 15
SREBF2-207ENST00000490262 SF3A3Q12874 501 aaKnown RBP eCLIP10.08□□□□□ -0.83e-7■■■□□ 14.8
SREBF2-207ENST00000490262 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.87□□□□□ -0.199e-11■■□□□ 14.2
SREBF2-207ENST00000490262 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.49■□□□□ 0.712e-6■■□□□ 13.9
SREBF2-207ENST00000490262 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.31□□□□□ -0.121e-9■□□□□ 10.8
SREBF2-207ENST00000490262 RPS3P23396 243 aaKnown RBP eCLIP11.34□□□□□ -0.594e-6■□□□□ 10.6
SREBF2-207ENST00000490262 AARSP49588 968 aaKnown RBP eCLIP12.85□□□□□ -0.358e-6■□□□□ 10.3
SREBF2-207ENST00000490262 YBX3P16989 372 aaKnown RBP eCLIP16.09■□□□□ 0.172e-8■□□□□ 9.7
SREBF2-207ENST00000490262 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.3□□□□□ -0.441e-6■□□□□ 8.3
Retrieved 20 of 20 RNA–protein pairs in 5.5 ms