RNA–Protein interactions for RNA: ENST00000490262.1

SREBF2-207, Transcript of sterol regulatory element binding transcription factor 2, humanhuman

TSL 2

Gene SREBF2, Length 450 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF2-207ENST00000490262 NISCHQ9Y2I1 1504 aa29.5■■■□□ 2.31
SREBF2-207ENST00000490262 CCDC180Q9P1Z9 1646 aa26.42■■□□□ 1.82
SREBF2-207ENST00000490262 ABCC9O60706 1549 aa26.34■■□□□ 1.81
SREBF2-207ENST00000490262 RB1CC1Q8TDY2 1594 aa25.11■■□□□ 1.61
SREBF2-207ENST00000490262 NACADO15069 1562 aa24.96■■□□□ 1.59
SREBF2-207ENST00000490262 DCAF8L2P0C7V8 631 aa24.88■■□□□ 1.57
SREBF2-207ENST00000490262 MYO15BQ96JP2 1530 aa24.65■■□□□ 1.54
SREBF2-207ENST00000490262 DNAJC5BQ9UF47 199 aa24.64■■□□□ 1.54
SREBF2-207ENST00000490262 UNC13AQ9UPW8 1703 aa24.55■■□□□ 1.52
SREBF2-207ENST00000490262 PABPN1Q86U42 306 aaKnown RBP eCLIP24.55■■□□□ 1.52
SREBF2-207ENST00000490262 ZCCHC6Q5VYS8 1495 aaKnown RBP24.45■■□□□ 1.51
SREBF2-207ENST00000490262 BICRAQ9NZM4 1560 aa24.37■■□□□ 1.49
SREBF2-207ENST00000490262 DCAF1Q9Y4B6 1507 aa24.36■■□□□ 1.49
SREBF2-207ENST00000490262 SCRIBQ14160 1630 aa24.07■■□□□ 1.44
SREBF2-207ENST00000490262 SHROOM4Q9ULL8 1493 aa24.05■■□□□ 1.44
SREBF2-207ENST00000490262 CC2D2AQ9P2K1 1620 aa23.8■■□□□ 1.4
SREBF2-207ENST00000490262 EIF4G1Q04637 1599 aaKnown RBP23.77■■□□□ 1.4
SREBF2-207ENST00000490262 CECR2Q9BXF3 1484 aa23.71■■□□□ 1.39
SREBF2-207ENST00000490262 NCAPD3P42695 1498 aa23.05■■□□□ 1.28
SREBF2-207ENST00000490262 ATAD2BQ9ULI0 1458 aa22.98■■□□□ 1.27
SREBF2-207ENST00000490262 SMARCA4P51532 1647 aa22.98■■□□□ 1.27
SREBF2-207ENST00000490262 SMARCA2P51531 1590 aa22.93■■□□□ 1.26
SREBF2-207ENST00000490262 BAZ1AQ9NRL2 1556 aaPredicted RBP22.89■■□□□ 1.25
SREBF2-207ENST00000490262 HMGXB3Q12766 1538 aa22.87■■□□□ 1.25
SREBF2-207ENST00000490262 BAZ1BQ9UIG0 1483 aaKnown RBP22.77■■□□□ 1.24
SREBF2-207ENST00000490262 PEG3Q9GZU2 1588 aa22.76■■□□□ 1.23
SREBF2-207ENST00000490262 ERCC6Q03468 1493 aa22.73■■□□□ 1.23
SREBF2-207ENST00000490262 MROH2BQ7Z745 1585 aa22.72■■□□□ 1.23
SREBF2-207ENST00000490262 NESP48681 1621 aa22.65■■□□□ 1.22
SREBF2-207ENST00000490262 CUX2O14529 1486 aa22.65■■□□□ 1.22
SREBF2-207ENST00000490262 DNAJC5Q9H3Z4 198 aa22.56■■□□□ 1.2
SREBF2-207ENST00000490262 LAMC3Q9Y6N6 1575 aa22.5■■□□□ 1.19
SREBF2-207ENST00000490262 WIZO95785 1651 aa22.46■■□□□ 1.19
SREBF2-207ENST00000490262 THOC2Q8NI27 1593 aaKnown RBP22.39■■□□□ 1.18
SREBF2-207ENST00000490262 PDS5BQ9NTI5 1447 aa22.38■■□□□ 1.17
SREBF2-207ENST00000490262 KIF21AQ7Z4S6 1674 aa22.36■■□□□ 1.17
SREBF2-207ENST00000490262 CADPSQ9ULU8 1353 aa22.36■■□□□ 1.17
SREBF2-207ENST00000490262 RSF1Q96T23 1441 aaPredicted RBP22.3■■□□□ 1.16
SREBF2-207ENST00000490262 TOP2AP11388 1531 aaKnown RBP22.17■■□□□ 1.14
SREBF2-207ENST00000490262 MRC2Q9UBG0 1479 aa22.17■■□□□ 1.14
SREBF2-207ENST00000490262 WDR62O43379 1518 aa22.11■■□□□ 1.13
SREBF2-207ENST00000490262 CFTRP13569 1480 aa22.11■■□□□ 1.13
SREBF2-207ENST00000490262 CEP164Q9UPV0 1460 aa22.1■■□□□ 1.13
SREBF2-207ENST00000490262 FANCD2Q9BXW9 1451 aa22.09■■□□□ 1.13
SREBF2-207ENST00000490262 CCDC88BA6NC98 1476 aa21.94■■□□□ 1.1
SREBF2-207ENST00000490262 URB2Q14146 1524 aaKnown RBP21.9■■□□□ 1.1
SREBF2-207ENST00000490262 PRDM2Q13029 1718 aa21.9■■□□□ 1.1
SREBF2-207ENST00000490262 TOPBP1Q92547 1522 aa21.68■■□□□ 1.06
SREBF2-207ENST00000490262 IFT140Q96RY7 1462 aa21.66■■□□□ 1.06
SREBF2-207ENST00000490262 OSCARQ8IYS5 282 aa21.66■■□□□ 1.06
SREBF2-207ENST00000490262 ABCC8Q09428 1581 aa21.65■■□□□ 1.06
SREBF2-207ENST00000490262 ZNF608Q9ULD9 1512 aaPredicted RBP21.62■■□□□ 1.05
SREBF2-207ENST00000490262 TRIM41Q8WV44 630 aa21.61■■□□□ 1.05
SREBF2-207ENST00000490262 DNMBPQ6XZF7 1577 aa21.61■■□□□ 1.05
SREBF2-207ENST00000490262 EIF4G3O43432 1585 aaKnown RBP21.49■■□□□ 1.03
SREBF2-207ENST00000490262 TARBP1Q13395 1621 aaKnown RBP21.49■■□□□ 1.03
SREBF2-207ENST00000490262 POLA1P09884 1462 aaPredicted RBP21.47■■□□□ 1.03
SREBF2-207ENST00000490262 AQRO60306 1485 aaKnown RBP eCLIP21.45■■□□□ 1.021e-10■■■■□ 26.6
SREBF2-207ENST00000490262 RAD54L2Q9Y4B4 1467 aa21.39■■□□□ 1.02
SREBF2-207ENST00000490262 SUPT5HO00267 1087 aaKnown RBP21.39■■□□□ 1.01
SREBF2-207ENST00000490262 SOGA1O94964 1423 aa21.38■■□□□ 1.01
SREBF2-207ENST00000490262 FGD5Q6ZNL6 1462 aa21.35■■□□□ 1.01
SREBF2-207ENST00000490262 RIMBP3CA6NJZ7 1639 aa21.35■■□□□ 1.01
SREBF2-207ENST00000490262 RIMBP3BA6NNM3 1639 aa21.35■■□□□ 1.01
SREBF2-207ENST00000490262 RIMBP3Q9UFD9 1639 aa21.35■■□□□ 1.01
SREBF2-207ENST00000490262 CUX1P39880 1505 aa21.34■■□□□ 1.01
SREBF2-207ENST00000490262 CHD1O14646 1710 aa21.33■■□□□ 1.01
SREBF2-207ENST00000490262 TDRD9Q8NDG6 1382 aaKnown RBP21.33■■□□□ 1
SREBF2-207ENST00000490262 FBLN2P98095 1184 aa21.3■■□□□ 1
SREBF2-207ENST00000490262 ARHGEF11O15085 1522 aa21.29■■□□□ 1
SREBF2-207ENST00000490262 WDR97A6NE52 1622 aa21.27■■□□□ 1
SREBF2-207ENST00000490262 SNAPC4Q5SXM2 1469 aa21.21■□□□□ 0.99
SREBF2-207ENST00000490262 GRIN2BQ13224 1484 aa21.18■□□□□ 0.98
SREBF2-207ENST00000490262 MAGI1Q96QZ7 1491 aaPredicted RBP21.17■□□□□ 0.98
SREBF2-207ENST00000490262 CYB5RLQ6IPT4 315 aa21.15■□□□□ 0.98
SREBF2-207ENST00000490262 CHMP7Q8WUX9 453 aaPredicted RBP21.15■□□□□ 0.98
SREBF2-207ENST00000490262 GAPVD1Q14C86 1478 aa21.13■□□□□ 0.97
SREBF2-207ENST00000490262 ABCA10Q8WWZ4 1543 aa21.11■□□□□ 0.97
SREBF2-207ENST00000490262 PBRM1Q86U86 1689 aa21.1■□□□□ 0.97
SREBF2-207ENST00000490262 SYNJ2O15056 1496 aa21.09■□□□□ 0.97
SREBF2-207ENST00000490262 ARAP1Q96P48 1450 aa21.08■□□□□ 0.97
SREBF2-207ENST00000490262 SYNJ1O43426 1573 aa21.08■□□□□ 0.97
SREBF2-207ENST00000490262 CLASP1Q7Z460 1538 aa21.08■□□□□ 0.96
SREBF2-207ENST00000490262 ABCA5Q8WWZ7 1642 aa21.07■□□□□ 0.96
SREBF2-207ENST00000490262 WRNQ14191 1432 aaPredicted RBP eCLIP21.04■□□□□ 0.96
SREBF2-207ENST00000490262 TOP2BQ02880 1626 aa21.03■□□□□ 0.96
SREBF2-207ENST00000490262 BIVM-ERCC5R4GMW8 1640 aa21.03■□□□□ 0.96
SREBF2-207ENST00000490262 GRIN2AQ12879 1464 aa20.9■□□□□ 0.94
SREBF2-207ENST00000490262 ADAMTS12P58397 1594 aa20.89■□□□□ 0.94
SREBF2-207ENST00000490262 TRHP20396 242 aaPredicted RBP20.88■□□□□ 0.93
SREBF2-207ENST00000490262 FHAD1B1AJZ9 1412 aa20.86■□□□□ 0.93
SREBF2-207ENST00000490262 ERICH3Q5RHP9 1530 aa20.85■□□□□ 0.93
SREBF2-207ENST00000490262 NUP160Q12769 1436 aa20.83■□□□□ 0.93
SREBF2-207ENST00000490262 CEP170Q5SW79 1584 aa20.82■□□□□ 0.92
SREBF2-207ENST00000490262 ERCC6L2Q5T890 1561 aa20.76■□□□□ 0.91
SREBF2-207ENST00000490262 SHROOM2Q13796 1616 aa20.73■□□□□ 0.91
SREBF2-207ENST00000490262 JPH4Q96JJ6 628 aa20.64■□□□□ 0.89
SREBF2-207ENST00000490262 KIF27Q86VH2 1401 aa20.63■□□□□ 0.89
SREBF2-207ENST00000490262 PRG4Q92954 1404 aaPredicted RBP20.63■□□□□ 0.89
SREBF2-207ENST00000490262 IGF1RP08069 1367 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms