RNA–Protein interactions for RNA: YPL174C

NIP100, Transcript of Large subunit of the dynactin complex, yeastyeast

Gene NIP100, Length 2,607 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NIP100YPL174C YMR030W-AQ3E760 96 aa0.09□□□□□ -2.39
NIP100YPL174C TCB3Q03640 1545 aaKnown RBP0.09□□□□□ -2.4
NIP100YPL174C TIR1P10863 254 aa0.09□□□□□ -2.4
NIP100YPL174C SKI6P46948 246 aaPredicted RBP0.09□□□□□ -2.4
NIP100YPL174C RFA3P26755 122 aaKnown RBP0.08□□□□□ -2.4
NIP100YPL174C YBL010CP32788 280 aa0.08□□□□□ -2.4
NIP100YPL174C YOR015WQ12169 119 aa0.08□□□□□ -2.4
NIP100YPL174C RSF2P46974 1380 aa0.08□□□□□ -2.4
NIP100YPL174C VPS15P22219 1454 aa0.08□□□□□ -2.4
NIP100YPL174C MRS1P07266 363 aa0.08□□□□□ -2.4
NIP100YPL174C MATALPHA2P0CY08 210 aa0.08□□□□□ -2.4
NIP100YPL174C HMLALPHA2P0CY09 210 aa0.08□□□□□ -2.4
NIP100YPL174C CNB1P25296 175 aa0.08□□□□□ -2.4
NIP100YPL174C MSS2P40990 351 aa0.08□□□□□ -2.4
NIP100YPL174C RPS29BP41058 56 aaKnown RBP0.08□□□□□ -2.4
NIP100YPL174C PGA2P53903 129 aa0.08□□□□□ -2.4
NIP100YPL174C MRPS17Q03246 237 aaPredicted RBP0.08□□□□□ -2.4
NIP100YPL174C TY2B-BQ12491 1770 aa0.08□□□□□ -2.4
NIP100YPL174C TRX3P25372 127 aa0.07□□□□□ -2.4
NIP100YPL174C MOB1P40484 314 aa0.07□□□□□ -2.4
NIP100YPL174C NOP19P53317 196 aaPredicted RBP0.07□□□□□ -2.4
NIP100YPL174C TOR2P32600 2474 aaKnown RBP0.07□□□□□ -2.4
NIP100YPL174C NSA2P40078 261 aaKnown RBP0.07□□□□□ -2.4
NIP100YPL174C VPS28Q02767 242 aa0.07□□□□□ -2.4
NIP100YPL174C IDP1P21954 428 aaKnown RBP0.06□□□□□ -2.4
NIP100YPL174C NSG1P38837 291 aa0.06□□□□□ -2.4
NIP100YPL174C PDS1P40316 373 aaPredicted RBP0.06□□□□□ -2.4
NIP100YPL174C GPI14P47088 403 aaKnown RBP0.06□□□□□ -2.4
NIP100YPL174C RTC4P53850 401 aa0.06□□□□□ -2.4
NIP100YPL174C VAM10Q08474 114 aa0.06□□□□□ -2.4
NIP100YPL174C FCY1Q12178 158 aa0.06□□□□□ -2.4
NIP100YPL174C YHR213W-BQ8TGK1 99 aa0.06□□□□□ -2.4
NIP100YPL174C ESP1Q03018 1630 aa0.06□□□□□ -2.4
NIP100YPL174C PDR5P33302 1511 aaKnown RBP0.06□□□□□ -2.4
NIP100YPL174C UFD4P33202 1483 aa0.06□□□□□ -2.4
NIP100YPL174C CIN5P40917 295 aa0.06□□□□□ -2.4
NIP100YPL174C RPL43AP0CX25 92 aaKnown RBP0.05□□□□□ -2.4
NIP100YPL174C RPL43BP0CX26 92 aa0.05□□□□□ -2.4
NIP100YPL174C TAF14P35189 244 aa0.05□□□□□ -2.4
NIP100YPL174C YFL019CP43576 117 aa0.05□□□□□ -2.4
NIP100YPL174C TMA23Q03525 211 aa0.05□□□□□ -2.4
NIP100YPL174C UPS1Q05776 175 aa0.05□□□□□ -2.4
NIP100YPL174C YOR072WQ08486 104 aa0.05□□□□□ -2.4
NIP100YPL174C YDL157CQ12082 118 aa0.05□□□□□ -2.4
NIP100YPL174C RIF1P29539 1916 aa0.05□□□□□ -2.4
NIP100YPL174C PHO85P17157 305 aa0.05□□□□□ -2.4
NIP100YPL174C YCR001WP25347 104 aa0.05□□□□□ -2.4
NIP100YPL174C TDA4P47153 279 aa0.05□□□□□ -2.4
NIP100YPL174C YNL184CP53876 108 aa0.05□□□□□ -2.4
NIP100YPL174C ETR1P38071 380 aa0.04□□□□□ -2.4
NIP100YPL174C AIM34Q03673 198 aa0.04□□□□□ -2.4
NIP100YPL174C ATG41Q12048 136 aa0.04□□□□□ -2.4
NIP100YPL174C TY3B-IQ7LHG5 1498 aaKnown RBP0.04□□□□□ -2.4
NIP100YPL174C ARG80P07249 177 aa0.04□□□□□ -2.4
NIP100YPL174C YKR070WP36151 352 aaKnown RBP0.04□□□□□ -2.4
NIP100YPL174C POG1P40473 351 aa0.04□□□□□ -2.4
NIP100YPL174C NSE4P43124 402 aa0.04□□□□□ -2.4
NIP100YPL174C NAT3Q06504 195 aa0.04□□□□□ -2.4
NIP100YPL174C DAS2Q12084 232 aa0.04□□□□□ -2.4
NIP100YPL174C TY2B-LR1P0C2J3 1770 aa0.04□□□□□ -2.4
NIP100YPL174C TY2B-FP0CX63 1770 aa0.04□□□□□ -2.4
NIP100YPL174C TY2B-GR2P0CX64 1770 aa0.04□□□□□ -2.4
NIP100YPL174C TY2B-CP25384 1770 aa0.04□□□□□ -2.4
NIP100YPL174C TY2B-DR2Q03494 1770 aa0.04□□□□□ -2.4
NIP100YPL174C TY2B-DR3Q07791 1770 aaKnown RBP0.04□□□□□ -2.4
NIP100YPL174C TY2B-OR1Q12113 1770 aa0.04□□□□□ -2.4
NIP100YPL174C TY2B-DR1Q12472 1770 aa0.04□□□□□ -2.4
NIP100YPL174C TY2B-OR2Q12501 1770 aa0.04□□□□□ -2.4
NIP100YPL174C SCC2Q04002 1493 aa0.04□□□□□ -2.4
NIP100YPL174C FAS1P07149 2051 aaKnown RBP0.04□□□□□ -2.4
NIP100YPL174C TAH1P25638 111 aaPredicted RBP0.03□□□□□ -2.4
NIP100YPL174C ASF2P32448 525 aaPredicted RBP0.03□□□□□ -2.4
NIP100YPL174C CAF4P36130 643 aa0.03□□□□□ -2.4
NIP100YPL174C GEP7P53171 287 aa0.03□□□□□ -2.4
NIP100YPL174C KEI1Q06346 221 aa0.03□□□□□ -2.4
NIP100YPL174C YOL024WQ08172 172 aa0.03□□□□□ -2.4
NIP100YPL174C CGR1P53188 120 aa0.03□□□□□ -2.4
NIP100YPL174C TIM13P53299 105 aa0.03□□□□□ -2.4
NIP100YPL174C NRK1P53915 240 aa0.03□□□□□ -2.4
NIP100YPL174C YNL122CP53921 115 aaPredicted RBP0.03□□□□□ -2.4
NIP100YPL174C YDC1Q02896 317 aa0.03□□□□□ -2.4
NIP100YPL174C GAL83Q04739 417 aa0.03□□□□□ -2.4
NIP100YPL174C YLR412C-AQ3E742 68 aa0.03□□□□□ -2.4
NIP100YPL174C URB1P34241 1764 aaKnown RBP0.03□□□□□ -2.4
NIP100YPL174C NUP188P52593 1655 aaKnown RBP0.03□□□□□ -2.41
NIP100YPL174C RAD9P14737 1309 aa0.02□□□□□ -2.41
NIP100YPL174C HSP30P25619 332 aa0.02□□□□□ -2.41
NIP100YPL174C RRT1P38192 103 aa0.02□□□□□ -2.41
NIP100YPL174C DML1Q03652 475 aa0.02□□□□□ -2.41
NIP100YPL174C YHP1Q04116 353 aa0.02□□□□□ -2.41
NIP100YPL174C PRM3Q08931 133 aa0.02□□□□□ -2.41
NIP100YPL174C PST2Q12335 198 aaKnown RBP0.02□□□□□ -2.41
NIP100YPL174C YDL085C-AQ3E7B7 68 aaKnown RBP0.02□□□□□ -2.41
NIP100YPL174C MYO4P32492 1471 aa0.02□□□□□ -2.41
NIP100YPL174C MPM1P40364 252 aa0.01□□□□□ -2.41
NIP100YPL174C BRX1Q08235 291 aaKnown RBP0.01□□□□□ -2.41
NIP100YPL174C ATP20Q12233 115 aa0.01□□□□□ -2.41
NIP100YPL174C PDR11P40550 1411 aa0.01□□□□□ -2.41
NIP100YPL174C RPO21P04050 1733 aaKnown RBP0.01□□□□□ -2.41
NIP100YPL174C RAD6P06104 172 aa0□□□□□ -2.41
Retrieved 100 of 5,963 RNA–protein pairs in 26.4 ms