RNA–Protein interactions for RNA: YOR332W

VMA4, Transcript of Subunit E of the V1 domain of the vacuolar H+-ATPase (V-ATPase), yeast

Gene VMA4, Length 702 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VMA4	YOR332W	MIX23	P38162	196 aa		4.95	□□□□□ -1.62
VMA4	YOR332W	YER134C	P40081	178 aa		4.95	□□□□□ -1.62
VMA4	YOR332W	YIL163C	P40448	117 aa		4.95	□□□□□ -1.62
VMA4	YOR332W	ECO1	P43605	281 aa		4.95	□□□□□ -1.62
VMA4	YOR332W	YJL028W	P47062	111 aa		4.95	□□□□□ -1.62
VMA4	YOR332W	YJR015W	P47090	510 aa		4.95	□□□□□ -1.62
VMA4	YOR332W	TAF4	P50105	388 aa		4.95	□□□□□ -1.62
VMA4	YOR332W	WSC2	P53832	503 aa		4.95	□□□□□ -1.62
VMA4	YOR332W	YMR166C	Q03829	368 aa		4.95	□□□□□ -1.62
VMA4	YOR332W	PKR1	Q03880	122 aa	Known RBP	4.95	□□□□□ -1.62
VMA4	YOR332W	PAU23	Q07987	124 aa		4.95	□□□□□ -1.62
VMA4	YOR332W	AKR2	Q12013	749 aa		4.95	□□□□□ -1.62
VMA4	YOR332W	TPT1	Q12272	230 aa	Known RBP	4.95	□□□□□ -1.62
VMA4	YOR332W	PAU17	Q12370	124 aa		4.95	□□□□□ -1.62
VMA4	YOR332W	CDC39	P25655	2108 aa	Known RBP	4.94	□□□□□ -1.62
VMA4	YOR332W	SOD1	P00445	154 aa	Known RBP	4.94	□□□□□ -1.62
VMA4	YOR332W	RPL7A	P05737	244 aa	Known RBP	4.94	□□□□□ -1.62
VMA4	YOR332W	PAM17	P36147	197 aa		4.94	□□□□□ -1.62
VMA4	YOR332W	YHR138C	P38841	114 aa	Predicted RBP	4.94	□□□□□ -1.62
VMA4	YOR332W	MTC6	P38849	526 aa		4.94	□□□□□ -1.62
VMA4	YOR332W	RPA43	P46669	326 aa		4.94	□□□□□ -1.62
VMA4	YOR332W	MIC27	P50945	234 aa		4.94	□□□□□ -1.62
VMA4	YOR332W	YGR151C	P53287	111 aa		4.94	□□□□□ -1.62
VMA4	YOR332W	HSK3	P69852	69 aa		4.94	□□□□□ -1.62
VMA4	YOR332W	DYN2	Q02647	92 aa		4.94	□□□□□ -1.62
VMA4	YOR332W	SHH3	Q04487	196 aa		4.94	□□□□□ -1.62
VMA4	YOR332W	ECM18	Q04623	453 aa		4.94	□□□□□ -1.62
VMA4	YOR332W	TVP18	Q04767	167 aa		4.94	□□□□□ -1.62
VMA4	YOR332W	RAF1	Q06891	181 aa		4.94	□□□□□ -1.62
VMA4	YOR332W	RRS1	Q08746	203 aa	Known RBP	4.94	□□□□□ -1.62
VMA4	YOR332W	YDL157C	Q12082	118 aa		4.94	□□□□□ -1.62
VMA4	YOR332W	RPL7B	Q12213	244 aa	Known RBP	4.94	□□□□□ -1.62
VMA4	YOR332W	GEP5	Q12393	293 aa		4.94	□□□□□ -1.62
VMA4	YOR332W	YGL258W-A	Q3E740	77 aa		4.94	□□□□□ -1.62
VMA4	YOR332W	RPS22B	Q3E7Y3	130 aa	Known RBP	4.94	□□□□□ -1.62
VMA4	YOR332W	SEC16	P48415	2195 aa	Known RBP	4.94	□□□□□ -1.62
VMA4	YOR332W	FMP27	Q06179	2628 aa		4.93	□□□□□ -1.62
VMA4	YOR332W	BLM10	P43583	2143 aa		4.93	□□□□□ -1.62
VMA4	YOR332W	MRS3	P10566	314 aa		4.93	□□□□□ -1.62
VMA4	YOR332W	HAP3	P13434	144 aa		4.93	□□□□□ -1.62
VMA4	YOR332W	QRI5	P32344	111 aa		4.93	□□□□□ -1.62
VMA4	YOR332W	UTR5	P32630	166 aa		4.93	□□□□□ -1.62
VMA4	YOR332W	PHD1	P36093	366 aa		4.93	□□□□□ -1.62
VMA4	YOR332W	MRPL39	P36533	70 aa		4.93	□□□□□ -1.62
VMA4	YOR332W	YBR090C	P38253	122 aa		4.93	□□□□□ -1.62
VMA4	YOR332W	DOG1	P38774	246 aa		4.93	□□□□□ -1.62
VMA4	YOR332W	YER084W	P40057	128 aa		4.93	□□□□□ -1.62
VMA4	YOR332W	SEC24	P40482	926 aa	Known RBP	4.93	□□□□□ -1.62
VMA4	YOR332W	ACC1	Q00955	2233 aa	Known RBP	4.93	□□□□□ -1.62
VMA4	YOR332W	YER190C-B	P0CX94	160 aa		4.92	□□□□□ -1.62
VMA4	YOR332W	YEL077W-A	P0CX95	160 aa		4.92	□□□□□ -1.62
VMA4	YOR332W	YGR296C-B	P0CX96	160 aa		4.92	□□□□□ -1.62
VMA4	YOR332W	YPL283W-B	P0CX97	160 aa		4.92	□□□□□ -1.62
VMA4	YOR332W	YPR204C-A	P0CX98	160 aa		4.92	□□□□□ -1.62
VMA4	YOR332W	HMRA1	P0CY11	126 aa		4.92	□□□□□ -1.62
VMA4	YOR332W	GSP1	P32835	219 aa	Known RBP	4.92	□□□□□ -1.62
VMA4	YOR332W	GSP2	P32836	220 aa	Known RBP	4.92	□□□□□ -1.62
VMA4	YOR332W	YOX1	P34161	385 aa		4.92	□□□□□ -1.62
VMA4	YOR332W	ICS2	P38284	255 aa		4.92	□□□□□ -1.62
VMA4	YOR332W	AME1	P38313	324 aa		4.92	□□□□□ -1.62
VMA4	YOR332W	YAR068W	P39564	161 aa		4.92	□□□□□ -1.62
VMA4	YOR332W	PRE5	P40302	234 aa	Known RBP	4.92	□□□□□ -1.62
VMA4	YOR332W	NRM1	P53718	249 aa		4.92	□□□□□ -1.62
VMA4	YOR332W	TRI1	Q05024	226 aa		4.92	□□□□□ -1.62
VMA4	YOR332W	CNL1	Q06333	122 aa		4.92	□□□□□ -1.62
VMA4	YOR332W	NDE2	Q07500	545 aa		4.92	□□□□□ -1.62
VMA4	YOR332W	YMR316C-A	I2HB70	103 aa		4.91	□□□□□ -1.62
VMA4	YOR332W	TIR1	P10863	254 aa		4.91	□□□□□ -1.62
VMA4	YOR332W	CUP2	P15315	225 aa		4.91	□□□□□ -1.62
VMA4	YOR332W	TOM40	P23644	387 aa	Known RBP	4.91	□□□□□ -1.62
VMA4	YOR332W	FPR2	P32472	135 aa		4.91	□□□□□ -1.62
VMA4	YOR332W	RAD23	P32628	398 aa	Known RBP	4.91	□□□□□ -1.62
VMA4	YOR332W	MTR2	P34232	184 aa	Known RBP	4.91	□□□□□ -1.62
VMA4	YOR332W	PMU1	P36069	295 aa		4.91	□□□□□ -1.62
VMA4	YOR332W	TEM1	P38987	245 aa		4.91	□□□□□ -1.62
VMA4	YOR332W	UME6	P39001	836 aa		4.91	□□□□□ -1.62
VMA4	YOR332W	YER188W	P40103	239 aa		4.91	□□□□□ -1.62
VMA4	YOR332W	SAS2	P40963	338 aa		4.91	□□□□□ -1.62
VMA4	YOR332W	GON7	P46984	123 aa		4.91	□□□□□ -1.62
VMA4	YOR332W	UBC13	P52490	153 aa		4.91	□□□□□ -1.62
VMA4	YOR332W	ATG4	P53867	494 aa		4.91	□□□□□ -1.62
VMA4	YOR332W	ATP19	P81451	68 aa		4.91	□□□□□ -1.62
VMA4	YOR332W	YPL067C	Q02754	198 aa		4.91	□□□□□ -1.62
VMA4	YOR332W	YHP1	Q04116	353 aa		4.91	□□□□□ -1.62
VMA4	YOR332W	LPP1	Q04396	274 aa		4.91	□□□□□ -1.62
VMA4	YOR332W	CSI2	Q08054	341 aa		4.91	□□□□□ -1.62
VMA4	YOR332W	YOL024W	Q08172	172 aa		4.91	□□□□□ -1.62
VMA4	YOR332W	SEC4	P07560	215 aa	Known RBP	4.9	□□□□□ -1.63
VMA4	YOR332W	YCR007C	P25354	239 aa		4.9	□□□□□ -1.63
VMA4	YOR332W	RPS2	P25443	254 aa	Known RBP	4.9	□□□□□ -1.63
VMA4	YOR332W	YHR173C	P38864	112 aa		4.9	□□□□□ -1.63
VMA4	YOR332W	YDR209C	Q03480	137 aa		4.9	□□□□□ -1.63
VMA4	YOR332W	LIP2	Q06005	328 aa		4.9	□□□□□ -1.63
VMA4	YOR332W	YPL162C	Q12042	273 aa		4.9	□□□□□ -1.63
VMA4	YOR332W	Q0144	Q9ZZW2	109 aa		4.9	□□□□□ -1.63
VMA4	YOR332W	DFR1	P07807	211 aa	Known RBP RIP-Chip data	4.89	□□□□□ -1.63	not detected
VMA4	YOR332W	SEC11	P15367	167 aa		4.89	□□□□□ -1.63
VMA4	YOR332W	YGL230C	P53074	147 aa		4.89	□□□□□ -1.63
VMA4	YOR332W	CWC27	Q02770	301 aa		4.89	□□□□□ -1.63
VMA4	YOR332W	POS5	Q06892	414 aa		4.89	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 15.3 ms