RNA–Protein interactions for RNA: YNL223W

ATG4, Transcript of Conserved cysteine protease required for autophagy, yeastyeast

Gene ATG4, Length 1,485 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG4YNL223W DAN1P47178 298 aa4.8□□□□□ -1.64
ATG4YNL223W YGR018CP53211 109 aa4.8□□□□□ -1.64
ATG4YNL223W ATC1Q04005 294 aa4.8□□□□□ -1.64
ATG4YNL223W ZEO1Q08245 113 aa4.8□□□□□ -1.64
ATG4YNL223W RKI1Q12189 258 aa4.8□□□□□ -1.64
ATG4YNL223W YLR118CQ12354 227 aa4.8□□□□□ -1.64
ATG4YNL223W PHO85P17157 305 aa4.79□□□□□ -1.64
ATG4YNL223W POP5P28005 173 aa4.79□□□□□ -1.64
ATG4YNL223W RAD23P32628 398 aaKnown RBP4.79□□□□□ -1.64
ATG4YNL223W SDH4P37298 181 aa4.79□□□□□ -1.64
ATG4YNL223W MRPS9P38120 278 aa4.79□□□□□ -1.64
ATG4YNL223W NSE4P43124 402 aa4.79□□□□□ -1.64
ATG4YNL223W BNA1P47096 177 aa4.79□□□□□ -1.64
ATG4YNL223W MOG1P47123 218 aa4.79□□□□□ -1.64
ATG4YNL223W DSK2P48510 373 aa4.79□□□□□ -1.64
ATG4YNL223W LST7P53237 242 aa4.79□□□□□ -1.64
ATG4YNL223W YMR317WQ04893 1140 aa4.79□□□□□ -1.64
ATG4YNL223W ATP16Q12165 160 aa4.79□□□□□ -1.64
ATG4YNL223W ILV5P06168 395 aaKnown RBP4.78□□□□□ -1.64
ATG4YNL223W COQ3P27680 312 aa4.78□□□□□ -1.64
ATG4YNL223W AFR1P33304 620 aa4.78□□□□□ -1.64
ATG4YNL223W MIA40P36046 403 aa4.78□□□□□ -1.64
ATG4YNL223W TRS20P38334 175 aa4.78□□□□□ -1.64
ATG4YNL223W GTT1P40582 234 aa4.78□□□□□ -1.64
ATG4YNL223W PAU15P40585 124 aa4.78□□□□□ -1.64
ATG4YNL223W YFL054CP43549 646 aa4.78□□□□□ -1.64
ATG4YNL223W BPH1P25356 2167 aa4.77□□□□□ -1.65
ATG4YNL223W DFR1P07807 211 aaKnown RBP RIP-Chip data4.77□□□□□ -1.65not detected
ATG4YNL223W RPS22AP0C0W1 130 aaKnown RBP4.77□□□□□ -1.65
ATG4YNL223W RPB3P16370 318 aaKnown RBP4.77□□□□□ -1.65
ATG4YNL223W RNA15P25299 296 aaPredicted RBP4.77□□□□□ -1.65
ATG4YNL223W IMD2P38697 523 aaKnown RBP4.77□□□□□ -1.65
ATG4YNL223W WWM1P43582 211 aaKnown RBP4.77□□□□□ -1.65
ATG4YNL223W ATG27P46989 271 aa4.77□□□□□ -1.65
ATG4YNL223W YGR026WP53217 278 aa4.77□□□□□ -1.65
ATG4YNL223W LOA1Q06508 300 aa4.77□□□□□ -1.65
ATG4YNL223W LDS2Q08218 356 aa4.77□□□□□ -1.65
ATG4YNL223W CDC7P06243 507 aa4.76□□□□□ -1.65
ATG4YNL223W PET494P07390 489 aaPredicted RBP4.76□□□□□ -1.65
ATG4YNL223W MRPL33P20084 86 aa4.76□□□□□ -1.65
ATG4YNL223W RPS2P25443 254 aaKnown RBP4.76□□□□□ -1.65
ATG4YNL223W POF1P25576 258 aa4.76□□□□□ -1.65
ATG4YNL223W HMX1P32339 317 aa4.76□□□□□ -1.65
ATG4YNL223W AVT5P38176 459 aa4.76□□□□□ -1.65
ATG4YNL223W CDS1P38221 457 aa4.76□□□□□ -1.65
ATG4YNL223W DOG2P38773 246 aa4.76□□□□□ -1.65
ATG4YNL223W DOG1P38774 246 aa4.76□□□□□ -1.65
ATG4YNL223W GPP2P40106 250 aaKnown RBP4.76□□□□□ -1.65
ATG4YNL223W MGA1P53050 456 aa4.76□□□□□ -1.65
ATG4YNL223W YMR166CQ03829 368 aa4.76□□□□□ -1.65
ATG4YNL223W RXT3Q07458 294 aa4.76□□□□□ -1.65
ATG4YNL223W YOR352WQ08816 343 aa4.76□□□□□ -1.65
ATG4YNL223W YPS1P32329 569 aa4.75□□□□□ -1.65
ATG4YNL223W YBR013CP38215 129 aa4.75□□□□□ -1.65
ATG4YNL223W CYB5P40312 120 aa4.75□□□□□ -1.65
ATG4YNL223W PBP4Q07362 185 aaKnown RBP4.75□□□□□ -1.65
ATG4YNL223W IRC23Q08416 157 aa4.75□□□□□ -1.65
ATG4YNL223W HSP12P22943 109 aaKnown RBP4.75□□□□□ -1.65
ATG4YNL223W SUA7P29055 345 aaPredicted RBP4.75□□□□□ -1.65
ATG4YNL223W MRPL38P35996 138 aaPredicted RBP4.75□□□□□ -1.65
ATG4YNL223W SFT2P38166 215 aa4.75□□□□□ -1.65
ATG4YNL223W RRT1P38192 103 aa4.75□□□□□ -1.65
ATG4YNL223W HSP10P38910 106 aa4.75□□□□□ -1.65
ATG4YNL223W PIC2P40035 300 aa4.75□□□□□ -1.65
ATG4YNL223W GPI2P46961 280 aa4.75□□□□□ -1.65
ATG4YNL223W HIT1P46973 164 aa4.75□□□□□ -1.65
ATG4YNL223W HST4P53688 370 aa4.75□□□□□ -1.65
ATG4YNL223W YNR071CP53757 342 aa4.75□□□□□ -1.65
ATG4YNL223W DAD3P69850 94 aa4.75□□□□□ -1.65
ATG4YNL223W SDH7Q04401 133 aa4.75□□□□□ -1.65
ATG4YNL223W STP4Q07351 490 aa4.75□□□□□ -1.65
ATG4YNL223W SNU23Q12368 194 aaPredicted RBP4.75□□□□□ -1.65
ATG4YNL223W FMP49A0A023PZB3 126 aa4.74□□□□□ -1.65
ATG4YNL223W NHP6AP11632 93 aaKnown RBP4.74□□□□□ -1.65
ATG4YNL223W NNK1P36003 928 aa4.74□□□□□ -1.65
ATG4YNL223W PHD1P36093 366 aa4.74□□□□□ -1.65
ATG4YNL223W LSM2P38203 95 aaKnown RBP4.74□□□□□ -1.65
ATG4YNL223W ICS2P38284 255 aa4.74□□□□□ -1.65
ATG4YNL223W YIL163CP40448 117 aa4.74□□□□□ -1.65
ATG4YNL223W FYV6P53913 173 aa4.74□□□□□ -1.65
ATG4YNL223W OCA2P53949 197 aa4.74□□□□□ -1.65
ATG4YNL223W FIT2Q08906 153 aa4.74□□□□□ -1.65
ATG4YNL223W AYT1Q12226 474 aa4.74□□□□□ -1.65
ATG4YNL223W YOP1Q12402 180 aa4.74□□□□□ -1.65
ATG4YNL223W YER145C-AA0A023PYF4 145 aa4.73□□□□□ -1.65
ATG4YNL223W YHR213WP0CI67 198 aa4.73□□□□□ -1.65
ATG4YNL223W SRP21P32342 167 aa4.73□□□□□ -1.65
ATG4YNL223W YHR173CP38864 112 aa4.73□□□□□ -1.65
ATG4YNL223W IMP2P46972 177 aa4.73□□□□□ -1.65
ATG4YNL223W SWT21P53873 357 aaPredicted RBP4.73□□□□□ -1.65
ATG4YNL223W MRX11Q03079 207 aa4.73□□□□□ -1.65
ATG4YNL223W YML122CQ03207 126 aa4.73□□□□□ -1.65
ATG4YNL223W NAT3Q06504 195 aa4.73□□□□□ -1.65
ATG4YNL223W FEN2P25621 512 aaKnown RBP4.72□□□□□ -1.65
ATG4YNL223W SRP14P38985 146 aa4.72□□□□□ -1.65
ATG4YNL223W GLE2P40066 365 aa4.72□□□□□ -1.65
ATG4YNL223W PAU5P43575 122 aa4.72□□□□□ -1.65
ATG4YNL223W YJL027CP47063 138 aaPredicted RBP4.72□□□□□ -1.65
ATG4YNL223W YGR219WP53307 113 aa4.72□□□□□ -1.65
ATG4YNL223W CPD1P53314 239 aa4.72□□□□□ -1.65
Retrieved 100 of 5,963 RNA–protein pairs in 138.3 ms