RNA–Protein interactions for RNA: YLR400W

YLR400W, Transcript of Dubious open reading frame, yeastyeast

Gene YLR400W, Length 474 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YLR400WYLR400W YGR201CP42936 225 aa1.93□□□□□ -2.1
YLR400WYLR400W NSE4P43124 402 aa1.93□□□□□ -2.1
YLR400WYLR400W UPS1Q05776 175 aa1.93□□□□□ -2.1
YLR400WYLR400W YPR114WQ06107 315 aa1.93□□□□□ -2.1
YLR400WYLR400W YPR174CQ06616 221 aaPredicted RBP1.93□□□□□ -2.1
YLR400WYLR400W HRD1Q08109 551 aa1.93□□□□□ -2.1
YLR400WYLR400W FIT2Q08906 153 aa1.93□□□□□ -2.1
YLR400WYLR400W TRM3Q07527 1436 aa1.92□□□□□ -2.1
YLR400WYLR400W MDM35O60200 86 aa1.92□□□□□ -2.1
YLR400WYLR400W YRA2P36036 203 aaKnown RBP RIP-Chip data1.92□□□□□ -2.1not detected
YLR400WYLR400W MRPL24P36525 258 aaPredicted RBP1.92□□□□□ -2.1
YLR400WYLR400W MPM1P40364 252 aa1.92□□□□□ -2.1
YLR400WYLR400W YJL218WP40892 196 aaKnown RBP1.92□□□□□ -2.1
YLR400WYLR400W YHP1Q04116 353 aa1.92□□□□□ -2.1
YLR400WYLR400W YLR162WQ06235 118 aa1.92□□□□□ -2.1
YLR400WYLR400W YPD1Q07688 167 aa1.92□□□□□ -2.1
YLR400WYLR400W MSB2P32334 1306 aa1.91□□□□□ -2.1
YLR400WYLR400W PHO13P19881 312 aa1.91□□□□□ -2.1
YLR400WYLR400W MRS4P23500 304 aa1.91□□□□□ -2.1
YLR400WYLR400W GSP2P32836 220 aaKnown RBP1.91□□□□□ -2.1
YLR400WYLR400W YPT31P38555 223 aaKnown RBP1.91□□□□□ -2.1
YLR400WYLR400W YER135CP40082 130 aa1.91□□□□□ -2.1
YLR400WYLR400W PIR1Q03178 341 aa1.91□□□□□ -2.1
YLR400WYLR400W LIP1Q03579 150 aa1.91□□□□□ -2.1
YLR400WYLR400W CSN9Q03981 162 aa1.91□□□□□ -2.1
YLR400WYLR400W ATG10Q07879 167 aa1.91□□□□□ -2.1
YLR400WYLR400W ATG41Q12048 136 aa1.91□□□□□ -2.1
YLR400WYLR400W RIB3Q99258 208 aa1.91□□□□□ -2.1
YLR400WYLR400W DUR1,2P32528 1835 aaKnown RBP1.91□□□□□ -2.1
YLR400WYLR400W FLO9P39712 1322 aa1.91□□□□□ -2.1
YLR400WYLR400W MAK31P23059 88 aa1.9□□□□□ -2.11
YLR400WYLR400W POP7P38291 140 aa1.9□□□□□ -2.11
YLR400WYLR400W YBR219CP38317 127 aa1.9□□□□□ -2.11
YLR400WYLR400W YGL193CP53097 103 aa1.9□□□□□ -2.11
YLR400WYLR400W YGR042WP53227 271 aa1.9□□□□□ -2.11
YLR400WYLR400W YNR064CP53750 290 aa1.9□□□□□ -2.11
YLR400WYLR400W SEN2P16658 377 aa1.89□□□□□ -2.11
YLR400WYLR400W DDR48P18899 430 aaKnown RBP1.89□□□□□ -2.11
YLR400WYLR400W HPA3P39979 161 aa1.89□□□□□ -2.11
YLR400WYLR400W COF1Q03048 143 aaKnown RBP1.89□□□□□ -2.11
YLR400WYLR400W CSI2Q08054 341 aa1.89□□□□□ -2.11
YLR400WYLR400W INO4P13902 151 aa1.88□□□□□ -2.11
YLR400WYLR400W TRS20P38334 175 aa1.88□□□□□ -2.11
YLR400WYLR400W GIM4P40005 111 aaKnown RBP1.88□□□□□ -2.11
YLR400WYLR400W CCS1P40202 249 aaKnown RBP1.88□□□□□ -2.11
YLR400WYLR400W ALB1P47019 175 aaPredicted RBP1.88□□□□□ -2.11
YLR400WYLR400W YGL204CP53089 101 aa1.88□□□□□ -2.11
YLR400WYLR400W GRX5Q02784 150 aa1.88□□□□□ -2.11
YLR400WYLR400W UPS3Q04006 179 aa1.88□□□□□ -2.11
YLR400WYLR400W YDR391CQ04170 232 aa1.88□□□□□ -2.11
YLR400WYLR400W ELP6Q04868 273 aa1.88□□□□□ -2.11
YLR400WYLR400W YHR007C-AQ07074 71 aa1.88□□□□□ -2.11
YLR400WYLR400W YDL241WQ07738 123 aa1.88□□□□□ -2.11
YLR400WYLR400W RPB7P34087 171 aa1.87□□□□□ -2.11
YLR400WYLR400W SHB17P36136 271 aaKnown RBP1.87□□□□□ -2.11
YLR400WYLR400W YEL067CP39978 195 aa1.87□□□□□ -2.11
YLR400WYLR400W FLX1P40464 311 aa1.87□□□□□ -2.11
YLR400WYLR400W YDR366CP87287 132 aa1.87□□□□□ -2.11
YLR400WYLR400W SPS2P08459 502 aa1.86□□□□□ -2.11
YLR400WYLR400W HSP12P22943 109 aaKnown RBP1.86□□□□□ -2.11
YLR400WYLR400W SRP21P32342 167 aa1.86□□□□□ -2.11
YLR400WYLR400W EST3Q03096 181 aa1.86□□□□□ -2.11
YLR400WYLR400W YLR361C-AQ3E795 98 aa1.86□□□□□ -2.11
YLR400WYLR400W TAF2P23255 1407 aa1.85□□□□□ -2.11
YLR400WYLR400W STF2P16965 84 aa1.85□□□□□ -2.11
YLR400WYLR400W RPC19P28000 142 aaKnown RBP1.85□□□□□ -2.11
YLR400WYLR400W RPL13BP40212 199 aaKnown RBP1.85□□□□□ -2.11
YLR400WYLR400W PHB1P40961 287 aa1.85□□□□□ -2.11
YLR400WYLR400W GPI2P46961 280 aa1.85□□□□□ -2.11
YLR400WYLR400W YAE1P47118 141 aaPredicted RBP1.85□□□□□ -2.11
YLR400WYLR400W GEP7P53171 287 aa1.85□□□□□ -2.11
YLR400WYLR400W YML079WQ03629 201 aa1.85□□□□□ -2.11
YLR400WYLR400W YMR252CQ04814 134 aa1.85□□□□□ -2.11
YLR400WYLR400W RFU1Q08003 200 aa1.85□□□□□ -2.11
YLR400WYLR400W RPL13AQ12690 199 aaPredicted RBP1.85□□□□□ -2.11
YLR400WYLR400W GPA2P10823 449 aa1.84□□□□□ -2.11
YLR400WYLR400W YGL010WP25338 174 aa1.84□□□□□ -2.11
YLR400WYLR400W YBL010CP32788 280 aa1.84□□□□□ -2.11
YLR400WYLR400W ETR1P38071 380 aa1.84□□□□□ -2.11
YLR400WYLR400W MOB1P40484 314 aa1.84□□□□□ -2.11
YLR400WYLR400W HYR1P40581 163 aaKnown RBP1.84□□□□□ -2.11
YLR400WYLR400W YGR039WP53225 103 aa1.84□□□□□ -2.11
YLR400WYLR400W TIM8P57744 87 aa1.84□□□□□ -2.11
YLR400WYLR400W UBC7Q02159 165 aa1.84□□□□□ -2.11
YLR400WYLR400W FMN1Q03778 218 aa1.84□□□□□ -2.11
YLR400WYLR400W UIP4Q08926 304 aa1.84□□□□□ -2.11
YLR400WYLR400W YMR030W-AQ3E760 96 aa1.84□□□□□ -2.11
YLR400WYLR400W SCS22Q6Q595 175 aa1.84□□□□□ -2.11
YLR400WYLR400W AHT1P29589 182 aa1.83□□□□□ -2.12
YLR400WYLR400W PRS3P38689 320 aaKnown RBP1.83□□□□□ -2.12
YLR400WYLR400W YHR140WP38842 239 aa1.83□□□□□ -2.12
YLR400WYLR400W YEL008WP40001 126 aa1.83□□□□□ -2.12
YLR400WYLR400W YGR269WP40326 108 aa1.83□□□□□ -2.12
YLR400WYLR400W CWC27Q02770 301 aa1.83□□□□□ -2.12
YLR400WYLR400W CYR1P08678 2026 aaKnown RBP1.83□□□□□ -2.12
YLR400WYLR400W YHL042WP38729 150 aa1.82□□□□□ -2.12
YLR400WYLR400W GLC8P41818 229 aa1.82□□□□□ -2.12
YLR400WYLR400W HHO1P53551 258 aa1.82□□□□□ -2.12
YLR400WYLR400W IRC19Q07843 230 aa1.82□□□□□ -2.12
YLR400WYLR400W QCR8P08525 94 aa1.81□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 27.2 ms