RNA–Protein interactions for RNA: YLR378C

SEC61, Transcript of Conserved ER protein translocation channel, yeastyeast

Gene SEC61, Length 1,443 nt, Biotype protein coding, Subcellular localisation Mitochondria, Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC61YLR378C NTF2P33331 125 aaKnown RBP7.44□□□□□ -1.22
SEC61YLR378C YKR045CP36138 183 aa7.44□□□□□ -1.22
SEC61YLR378C CSH1P38287 376 aa7.44□□□□□ -1.22
SEC61YLR378C BDH1P39714 382 aa7.44□□□□□ -1.22
SEC61YLR378C BNS1P50084 137 aa7.44□□□□□ -1.22
SEC61YLR378C MGA1P53050 456 aa7.44□□□□□ -1.22
SEC61YLR378C SDH7Q04401 133 aa7.44□□□□□ -1.22
SEC61YLR378C LOA1Q06508 300 aa7.44□□□□□ -1.22
SEC61YLR378C PET494P07390 489 aaPredicted RBP7.44□□□□□ -1.22
SEC61YLR378C POP5P28005 173 aa7.44□□□□□ -1.22
SEC61YLR378C AFR1P33304 620 aa7.44□□□□□ -1.22
SEC61YLR378C MIA40P36046 403 aa7.44□□□□□ -1.22
SEC61YLR378C AVT5P38176 459 aa7.44□□□□□ -1.22
SEC61YLR378C SOH1P38633 127 aa7.44□□□□□ -1.22
SEC61YLR378C IMD2P38697 523 aaKnown RBP7.44□□□□□ -1.22
SEC61YLR378C BPH1P25356 2167 aa7.43□□□□□ -1.22
SEC61YLR378C HSP12P22943 109 aaKnown RBP7.43□□□□□ -1.22
SEC61YLR378C RPS2P25443 254 aaKnown RBP7.43□□□□□ -1.22
SEC61YLR378C SUA7P29055 345 aaPredicted RBP7.43□□□□□ -1.22
SEC61YLR378C RRT1P38192 103 aa7.43□□□□□ -1.22
SEC61YLR378C CDS1P38221 457 aa7.43□□□□□ -1.22
SEC61YLR378C DOG2P38773 246 aa7.43□□□□□ -1.22
SEC61YLR378C DOG1P38774 246 aa7.43□□□□□ -1.22
SEC61YLR378C HSP10P38910 106 aa7.43□□□□□ -1.22
SEC61YLR378C PAU15P40585 124 aa7.43□□□□□ -1.22
SEC61YLR378C YJL213WP40896 331 aa7.43□□□□□ -1.22
SEC61YLR378C NSE4P43124 402 aa7.43□□□□□ -1.22
SEC61YLR378C DAD3P69850 94 aa7.43□□□□□ -1.22
SEC61YLR378C YMR317WQ04893 1140 aa7.43□□□□□ -1.22
SEC61YLR378C YLR118CQ12354 227 aa7.43□□□□□ -1.22
SEC61YLR378C SNU23Q12368 194 aaPredicted RBP7.43□□□□□ -1.22
SEC61YLR378C YCR022CP25620 114 aa7.42□□□□□ -1.22
SEC61YLR378C COQ3P27680 312 aa7.42□□□□□ -1.22
SEC61YLR378C RPS0AP32905 252 aaKnown RBP7.42□□□□□ -1.22
SEC61YLR378C DAN1P47178 298 aa7.42□□□□□ -1.22
SEC61YLR378C DSK2P48510 373 aa7.42□□□□□ -1.22
SEC61YLR378C YNR071CP53757 342 aa7.42□□□□□ -1.22
SEC61YLR378C MRPL38P35996 138 aaPredicted RBP7.41□□□□□ -1.22
SEC61YLR378C SDH4P37298 181 aa7.41□□□□□ -1.22
SEC61YLR378C CYB5P40312 120 aa7.41□□□□□ -1.22
SEC61YLR378C ATG27P46989 271 aa7.41□□□□□ -1.22
SEC61YLR378C YGR018CP53211 109 aa7.41□□□□□ -1.22
SEC61YLR378C TMA10Q06177 86 aa7.41□□□□□ -1.22
SEC61YLR378C CDC7P06243 507 aa7.4□□□□□ -1.22
SEC61YLR378C RNA15P25299 296 aaPredicted RBP7.4□□□□□ -1.22
SEC61YLR378C FEN2P25621 512 aaKnown RBP7.4□□□□□ -1.22
SEC61YLR378C YGR026WP53217 278 aa7.4□□□□□ -1.22
SEC61YLR378C LDS2Q08218 356 aa7.4□□□□□ -1.22
SEC61YLR378C YKL075CP36083 450 aa7.39□□□□□ -1.23
SEC61YLR378C SFT2P38166 215 aa7.39□□□□□ -1.23
SEC61YLR378C RXT3Q07458 294 aa7.39□□□□□ -1.23
SEC61YLR378C MEC1P38111 2368 aa7.38□□□□□ -1.23
SEC61YLR378C FMP49A0A023PZB3 126 aa7.38□□□□□ -1.23
SEC61YLR378C NHP6AP11632 93 aaKnown RBP7.38□□□□□ -1.23
SEC61YLR378C MRPL33P20084 86 aa7.38□□□□□ -1.23
SEC61YLR378C POF1P25576 258 aa7.38□□□□□ -1.23
SEC61YLR378C PIC2P40035 300 aa7.38□□□□□ -1.23
SEC61YLR378C GPP2P40106 250 aaKnown RBP7.38□□□□□ -1.23
SEC61YLR378C GPI2P46961 280 aa7.38□□□□□ -1.23
SEC61YLR378C APS2Q00381 147 aa7.38□□□□□ -1.23
SEC61YLR378C YOR352WQ08816 343 aa7.38□□□□□ -1.23
SEC61YLR378C TY1A-HP0C2I4 478 aaKnown RBP7.37□□□□□ -1.23
SEC61YLR378C NNK1P36003 928 aa7.37□□□□□ -1.23
SEC61YLR378C ICS2P38284 255 aa7.37□□□□□ -1.23
SEC61YLR378C YHR173CP38864 112 aa7.37□□□□□ -1.23
SEC61YLR378C HIT1P46973 164 aa7.37□□□□□ -1.23
SEC61YLR378C SWT21P53873 357 aaPredicted RBP7.37□□□□□ -1.23
SEC61YLR378C NAT3Q06504 195 aa7.37□□□□□ -1.23
SEC61YLR378C DCN1Q12395 269 aa7.37□□□□□ -1.23
SEC61YLR378C YOP1Q12402 180 aa7.37□□□□□ -1.23
SEC61YLR378C YPS1P32329 569 aa7.36□□□□□ -1.23
SEC61YLR378C HST4P53688 370 aa7.36□□□□□ -1.23
SEC61YLR378C MRX11Q03079 207 aa7.36□□□□□ -1.23
SEC61YLR378C YMR166CQ03829 368 aa7.36□□□□□ -1.23
SEC61YLR378C FIT2Q08906 153 aa7.36□□□□□ -1.23
SEC61YLR378C SMT3Q12306 101 aaKnown RBP7.36□□□□□ -1.23
SEC61YLR378C COX2P00410 251 aa7.35□□□□□ -1.23
SEC61YLR378C PHD1P36093 366 aa7.35□□□□□ -1.23
SEC61YLR378C PRS4P38063 326 aaPredicted RBP7.35□□□□□ -1.23
SEC61YLR378C FYV6P53913 173 aa7.35□□□□□ -1.23
SEC61YLR378C YPL108WQ02872 168 aaPredicted RBP7.35□□□□□ -1.23
SEC61YLR378C PBP4Q07362 185 aaKnown RBP7.35□□□□□ -1.23
SEC61YLR378C YBR013CP38215 129 aa7.35□□□□□ -1.23
SEC61YLR378C TIF11P38912 153 aaKnown RBP7.35□□□□□ -1.23
SEC61YLR378C PAU5P43575 122 aa7.35□□□□□ -1.23
SEC61YLR378C AYT1Q12226 474 aa7.35□□□□□ -1.23
SEC61YLR378C PRE9P23638 258 aaKnown RBP7.34□□□□□ -1.23
SEC61YLR378C RPB9P27999 122 aa7.34□□□□□ -1.23
SEC61YLR378C TIR2P33890 251 aa7.34□□□□□ -1.23
SEC61YLR378C LSM2P38203 95 aaKnown RBP7.34□□□□□ -1.23
SEC61YLR378C YIL163CP40448 117 aa7.34□□□□□ -1.23
SEC61YLR378C OCA2P53949 197 aa7.34□□□□□ -1.23
SEC61YLR378C SRL1Q08673 210 aa7.34□□□□□ -1.23
SEC61YLR378C DDI2P0CH63 225 aa7.33□□□□□ -1.24
SEC61YLR378C DDI3P0CH64 225 aa7.33□□□□□ -1.24
SEC61YLR378C IRC22P40006 225 aa7.33□□□□□ -1.24
SEC61YLR378C CPD1P53314 239 aa7.33□□□□□ -1.24
SEC61YLR378C IRC23Q08416 157 aa7.33□□□□□ -1.24
SEC61YLR378C YER145C-AA0A023PYF4 145 aa7.32□□□□□ -1.24
SEC61YLR378C PAU19P0CE85 124 aa7.32□□□□□ -1.24
Retrieved 100 of 5,963 RNA–protein pairs in 71.1 ms